RNA–Protein interactions for RNA: ENST00000259043.11

TRA2B-201, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-201ENST00000259043 TMUB1Q9BVT8 246 aa12.64□□□□□ -0.39
TRA2B-201ENST00000259043 PRR14Q9BWN1 585 aa12.64□□□□□ -0.39
TRA2B-201ENST00000259043 ZPR1O75312 459 aa12.62□□□□□ -0.39
TRA2B-201ENST00000259043 PDZRN3Q9UPQ7 1066 aa12.61□□□□□ -0.39
TRA2B-201ENST00000259043 PCDHB3Q9Y5E6 796 aa12.59□□□□□ -0.39
TRA2B-201ENST00000259043 TESPA1A2RU30 521 aaPredicted RBP12.58□□□□□ -0.4
TRA2B-201ENST00000259043 DNAJB2P25686 324 aa12.56□□□□□ -0.4
TRA2B-201ENST00000259043 PTGDRQ13258 359 aa12.56□□□□□ -0.4
TRA2B-201ENST00000259043 RBM46Q8TBY0 533 aaKnown RBP12.54□□□□□ -0.4
TRA2B-201ENST00000259043 BLOC1S3Q6QNY0 202 aa12.53□□□□□ -0.4
TRA2B-201ENST00000259043 TMEM134Q9H6X4 195 aa12.52□□□□□ -0.41
TRA2B-201ENST00000259043 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
TRA2B-201ENST00000259043 ADGRG1Q9Y653 693 aa12.51□□□□□ -0.41
TRA2B-201ENST00000259043 SLC19A1P41440 591 aa12.49□□□□□ -0.41
TRA2B-201ENST00000259043 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
TRA2B-201ENST00000259043 ZNF787Q6DD87 383 aa12.49□□□□□ -0.41
TRA2B-201ENST00000259043 ACTN4O43707 911 aaKnown RBP12.48□□□□□ -0.41
TRA2B-201ENST00000259043 RCCD1A6NED2 376 aa12.47□□□□□ -0.41
TRA2B-201ENST00000259043 TLL1O43897 1013 aa12.46□□□□□ -0.41
TRA2B-201ENST00000259043 TRIM67Q6ZTA4 783 aa12.46□□□□□ -0.41
TRA2B-201ENST00000259043 ANKLE1Q8NAG6 615 aa12.46□□□□□ -0.41
TRA2B-201ENST00000259043 NUTM2FA1L443 756 aa12.45□□□□□ -0.42
TRA2B-201ENST00000259043 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
TRA2B-201ENST00000259043 CFHP08603 1231 aa12.44□□□□□ -0.42
TRA2B-201ENST00000259043 RBM26Q5T8P6 1007 aaKnown RBP12.43□□□□□ -0.42
TRA2B-201ENST00000259043 SPRYD7Q5W111 196 aa12.43□□□□□ -0.42
TRA2B-201ENST00000259043 SLC24A1O60721 1099 aa12.42□□□□□ -0.42
TRA2B-201ENST00000259043 FAM161AQ3B820 660 aa12.42□□□□□ -0.42
TRA2B-201ENST00000259043 SMYD5Q6GMV2 418 aa12.42□□□□□ -0.42
TRA2B-201ENST00000259043 ZNF598Q86UK7 904 aaKnown RBP12.42□□□□□ -0.42
TRA2B-201ENST00000259043 S1PR4O95977 384 aa12.41□□□□□ -0.42
TRA2B-201ENST00000259043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.4□□□□□ -0.42
TRA2B-201ENST00000259043 FCHSD2O94868 740 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 SLC10A3P09131 477 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 PRR20EP86478 221 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 PRR20CP86479 221 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 PRR20DP86480 221 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 PRR20BP86481 221 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 PRR20AP86496 221 aa12.4□□□□□ -0.42
TRA2B-201ENST00000259043 PPEF1O14829 653 aaPredicted RBP12.39□□□□□ -0.43
TRA2B-201ENST00000259043 NR1I2O75469 434 aa12.39□□□□□ -0.43
TRA2B-201ENST00000259043 ADH1BP00325 375 aa12.38□□□□□ -0.43
TRA2B-201ENST00000259043 PKDCCQ504Y2 493 aa12.38□□□□□ -0.43
TRA2B-201ENST00000259043 GPR37O15354 613 aa12.37□□□□□ -0.43
TRA2B-201ENST00000259043 DGAT1O75907 488 aa12.37□□□□□ -0.43
TRA2B-201ENST00000259043 LIAT1Q6ZQX7 453 aa12.37□□□□□ -0.43
TRA2B-201ENST00000259043 OATP04181 439 aa12.36□□□□□ -0.43
TRA2B-201ENST00000259043 ZNF697Q5TEC3 545 aa12.35□□□□□ -0.43
TRA2B-201ENST00000259043 MYT1Q01538 1121 aa12.34□□□□□ -0.43
TRA2B-201ENST00000259043 PXYLP1Q8TE99 480 aa12.34□□□□□ -0.43
TRA2B-201ENST00000259043 ZNF775Q96BV0 537 aaPredicted RBP12.34□□□□□ -0.43
TRA2B-201ENST00000259043 SLC6A16Q9GZN6 736 aa12.34□□□□□ -0.43
TRA2B-201ENST00000259043 RSPH4AQ5TD94 716 aa12.33□□□□□ -0.44
TRA2B-201ENST00000259043 SCUBE3Q8IX30 993 aa12.32□□□□□ -0.44
TRA2B-201ENST00000259043 GDF9O60383 454 aa12.31□□□□□ -0.44
TRA2B-201ENST00000259043 HIC1Q14526 733 aa12.29□□□□□ -0.44
TRA2B-201ENST00000259043 FAM187AA6NFU0 413 aa12.28□□□□□ -0.44
TRA2B-201ENST00000259043 TNFRSF10AO00220 468 aa12.28□□□□□ -0.44
TRA2B-201ENST00000259043 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRA2B-201ENST00000259043 METTL3Q86U44 580 aaKnown RBP12.28□□□□□ -0.44
TRA2B-201ENST00000259043 FECHP22830 423 aa12.27□□□□□ -0.45
TRA2B-201ENST00000259043 PUS10Q3MIT2 529 aaKnown RBP12.27□□□□□ -0.45
TRA2B-201ENST00000259043 PLA2G2CQ5R387 149 aa12.27□□□□□ -0.45
TRA2B-201ENST00000259043 GPIHBP1Q8IV16 184 aa12.27□□□□□ -0.45
TRA2B-201ENST00000259043 SPSB2Q99619 263 aa12.27□□□□□ -0.45
TRA2B-201ENST00000259043 GNPATO15228 680 aa12.25□□□□□ -0.45
TRA2B-201ENST00000259043 TULP1O00294 542 aaPredicted RBP12.23□□□□□ -0.45
TRA2B-201ENST00000259043 LMOD2Q6P5Q4 547 aa12.23□□□□□ -0.45
TRA2B-201ENST00000259043 POTECB2RU33 542 aa12.22□□□□□ -0.45
TRA2B-201ENST00000259043 DAXXQ9UER7 740 aaPredicted RBP12.21□□□□□ -0.45
TRA2B-201ENST00000259043 RPIAP49247 311 aa12.19□□□□□ -0.46
TRA2B-201ENST00000259043 MORN1Q5T089 497 aa12.19□□□□□ -0.46
TRA2B-201ENST00000259043 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
TRA2B-201ENST00000259043 PKD2L1Q9P0L9 805 aa12.19□□□□□ -0.46
TRA2B-201ENST00000259043 FOXC1Q12948 553 aa12.17□□□□□ -0.46
TRA2B-201ENST00000259043 THAP11Q96EK4 314 aa12.17□□□□□ -0.46
TRA2B-201ENST00000259043 AAASQ9NRG9 546 aa12.17□□□□□ -0.46
TRA2B-201ENST00000259043 ST8SIA5O15466 376 aa12.16□□□□□ -0.46
TRA2B-201ENST00000259043 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
TRA2B-201ENST00000259043 FUT2Q10981 343 aa12.16□□□□□ -0.46
TRA2B-201ENST00000259043 CD2BP2O95400 341 aaKnown RBP12.15□□□□□ -0.46
TRA2B-201ENST00000259043 FCF1Q9Y324 198 aaKnown RBP12.15□□□□□ -0.46
TRA2B-201ENST00000259043 DDX11L8A8MPP1 907 aa12.14□□□□□ -0.47
TRA2B-201ENST00000259043 FMNL1O95466 1100 aaPredicted RBP12.14□□□□□ -0.47
TRA2B-201ENST00000259043 GCGRP47871 477 aa12.12□□□□□ -0.47
TRA2B-201ENST00000259043 SULF1Q8IWU6 871 aa12.12□□□□□ -0.47
TRA2B-201ENST00000259043 CRIPAKQ8N1N5 446 aa12.12□□□□□ -0.47
TRA2B-201ENST00000259043 SLC27A5Q9Y2P5 690 aa12.12□□□□□ -0.47
TRA2B-201ENST00000259043 SALL2Q9Y467 1007 aaPredicted RBP12.12□□□□□ -0.47
TRA2B-201ENST00000259043 FAM160A2Q8N612 972 aaPredicted RBP12.11□□□□□ -0.47
TRA2B-201ENST00000259043 MAP2K5Q13163 448 aa12.1□□□□□ -0.47
TRA2B-201ENST00000259043 PHOX2BQ99453 314 aa12.1□□□□□ -0.47
TRA2B-201ENST00000259043 TOR4AQ9NXH8 423 aa12.1□□□□□ -0.47
TRA2B-201ENST00000259043 AVPP01185 164 aa12.09□□□□□ -0.47
TRA2B-201ENST00000259043 CYP4X1Q8N118 509 aa12.09□□□□□ -0.47
TRA2B-201ENST00000259043 ZC3H15Q8WU90 426 aaKnown RBP12.09□□□□□ -0.47
TRA2B-201ENST00000259043 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
TRA2B-201ENST00000259043 BRICD5Q6PL45 260 aa12.08□□□□□ -0.48
TRA2B-201ENST00000259043 IRF6O14896 467 aa12.06□□□□□ -0.48
TRA2B-201ENST00000259043 ZMYND10O75800 440 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms