RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PLIN1O60240 522 aa20.16■□□□□ 0.82
DDX56-201ENST00000258772 SYNMO15061 1565 aa20.16■□□□□ 0.82
DDX56-201ENST00000258772 MYT1LQ9UL68 1186 aa20.16■□□□□ 0.82
DDX56-201ENST00000258772 KANK1Q14678 1352 aa20.14■□□□□ 0.81
DDX56-201ENST00000258772 VWDEQ8N2E2 1590 aa20.13■□□□□ 0.81
DDX56-201ENST00000258772 ATP7AQ04656 1500 aa20.13■□□□□ 0.81
DDX56-201ENST00000258772 WDR43Q15061 677 aaKnown RBP eCLIP20.13■□□□□ 0.81
DDX56-201ENST00000258772 ASXL1Q8IXJ9 1541 aa20.12■□□□□ 0.81
DDX56-201ENST00000258772 KIAA1210Q9ULL0 1709 aa20.12■□□□□ 0.81
DDX56-201ENST00000258772 INO80Q9ULG1 1556 aaPredicted RBP20.11■□□□□ 0.81
DDX56-201ENST00000258772 KIF3BO15066 747 aa20.11■□□□□ 0.81
DDX56-201ENST00000258772 CRBNQ96SW2 442 aa20.11■□□□□ 0.81
DDX56-201ENST00000258772 FANCAO15360 1455 aa20.11■□□□□ 0.81
DDX56-201ENST00000258772 EIF3AQ14152 1382 aaKnown RBP20.11■□□□□ 0.81
DDX56-201ENST00000258772 MS4A1P11836 297 aa20.1■□□□□ 0.81
DDX56-201ENST00000258772 ZBTB47Q9UFB7 747 aaPredicted RBP20.1■□□□□ 0.81
DDX56-201ENST00000258772 ABCA9Q8IUA7 1624 aa20.1■□□□□ 0.81
DDX56-201ENST00000258772 MYOM1P52179 1685 aa20.1■□□□□ 0.81
DDX56-201ENST00000258772 BCL11AQ9H165 835 aa20.1■□□□□ 0.81
DDX56-201ENST00000258772 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
DDX56-201ENST00000258772 PLEKHH1Q9ULM0 1364 aa20.1■□□□□ 0.81
DDX56-201ENST00000258772 PDE4AP27815 886 aa20.09■□□□□ 0.81
DDX56-201ENST00000258772 NEURL4Q96JN8 1562 aa20.09■□□□□ 0.81
DDX56-201ENST00000258772 PIK3C2GO75747 1445 aa20.08■□□□□ 0.81
DDX56-201ENST00000258772 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.8
DDX56-201ENST00000258772 ZNF521Q96K83 1311 aa20.07■□□□□ 0.8
DDX56-201ENST00000258772 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
DDX56-201ENST00000258772 KDM5AP29375 1690 aaKnown RBP20.06■□□□□ 0.8
DDX56-201ENST00000258772 CFAP70Q5T0N1 1121 aa20.05■□□□□ 0.8
DDX56-201ENST00000258772 GOLGA2Q08379 1002 aa20.05■□□□□ 0.8
DDX56-201ENST00000258772 ADGRL1O94910 1474 aa20.05■□□□□ 0.8
DDX56-201ENST00000258772 MAP3K4Q9Y6R4 1608 aa20.05■□□□□ 0.8
DDX56-201ENST00000258772 C20orf194Q5TEA3 1177 aa20.04■□□□□ 0.8
DDX56-201ENST00000258772 MROH1Q8NDA8 1641 aa20.04■□□□□ 0.8
DDX56-201ENST00000258772 NBR1Q14596 966 aa20.03■□□□□ 0.8
DDX56-201ENST00000258772 MYOM2P54296 1465 aa20.03■□□□□ 0.8
DDX56-201ENST00000258772 KIF1BO60333 1816 aa20.03■□□□□ 0.8
DDX56-201ENST00000258772 ADGRF5Q8IZF2 1346 aa20.03■□□□□ 0.8
DDX56-201ENST00000258772 UGGT1Q9NYU2 1555 aa20.02■□□□□ 0.8
DDX56-201ENST00000258772 ABCA6Q8N139 1617 aa20.01■□□□□ 0.79
DDX56-201ENST00000258772 NPM2Q86SE8 214 aaKnown RBP20.01■□□□□ 0.79
DDX56-201ENST00000258772 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
DDX56-201ENST00000258772 SLFN5Q08AF3 891 aa20■□□□□ 0.79
DDX56-201ENST00000258772 DEKP35659 375 aaKnown RBP19.98■□□□□ 0.79
DDX56-201ENST00000258772 TRMT2AQ8IZ69 625 aaKnown RBP19.98■□□□□ 0.79
DDX56-201ENST00000258772 EFCAB6Q5THR3 1501 aa19.98■□□□□ 0.79
DDX56-201ENST00000258772 IFT172Q9UG01 1749 aa19.98■□□□□ 0.79
DDX56-201ENST00000258772 CCDC146Q8IYE0 955 aa19.97■□□□□ 0.79
DDX56-201ENST00000258772 CARD14Q9BXL6 1004 aa19.97■□□□□ 0.79
DDX56-201ENST00000258772 KDM2BQ8NHM5 1336 aa19.97■□□□□ 0.79
DDX56-201ENST00000258772 SKAP1Q86WV1 359 aa19.96■□□□□ 0.79
DDX56-201ENST00000258772 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.96■□□□□ 0.79
DDX56-201ENST00000258772 KIDINS220Q9ULH0 1771 aa19.96■□□□□ 0.79
DDX56-201ENST00000258772 APAF1O14727 1248 aa19.95■□□□□ 0.78
DDX56-201ENST00000258772 NRXN1Q9ULB1 1477 aa19.95■□□□□ 0.78
DDX56-201ENST00000258772 ASXL2Q76L83 1435 aa19.95■□□□□ 0.78
DDX56-201ENST00000258772 MROH2AA6NES4 1674 aa19.94■□□□□ 0.78
DDX56-201ENST00000258772 PPRC1Q5VV67 1664 aaKnown RBP19.94■□□□□ 0.78
DDX56-201ENST00000258772 DAXXQ9UER7 740 aaPredicted RBP19.94■□□□□ 0.78
DDX56-201ENST00000258772 CENPQQ7L2Z9 268 aaPredicted RBP19.93■□□□□ 0.78
DDX56-201ENST00000258772 SPINK5Q9NQ38 1064 aaPredicted RBP19.93■□□□□ 0.78
DDX56-201ENST00000258772 SBNO2Q9Y2G9 1366 aa19.93■□□□□ 0.78
DDX56-201ENST00000258772 MYO3AQ8NEV4 1616 aa19.93■□□□□ 0.78
DDX56-201ENST00000258772 LMTK2Q8IWU2 1503 aa19.93■□□□□ 0.78
DDX56-201ENST00000258772 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
DDX56-201ENST00000258772 NKTRP30414 1462 aaKnown RBP19.9■□□□□ 0.78
DDX56-201ENST00000258772 NOS1P29475 1434 aa19.89■□□□□ 0.77
DDX56-201ENST00000258772 ZNF518AQ6AHZ1 1483 aa19.89■□□□□ 0.77
DDX56-201ENST00000258772 E9PSI1 815 aa19.89■□□□□ 0.77
DDX56-201ENST00000258772 CENPJQ9HC77 1338 aaPredicted RBP19.89■□□□□ 0.77
DDX56-201ENST00000258772 RTL5Q5HYW3 569 aaPredicted RBP19.88■□□□□ 0.77
DDX56-201ENST00000258772 SETBP1Q9Y6X0 1596 aa19.88■□□□□ 0.77
DDX56-201ENST00000258772 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
DDX56-201ENST00000258772 ADGRB3O60242 1522 aa19.88■□□□□ 0.77
DDX56-201ENST00000258772 POLR3AO14802 1390 aaPredicted RBP19.87■□□□□ 0.77
DDX56-201ENST00000258772 CHGAP10645 457 aaKnown RBP19.87■□□□□ 0.77
DDX56-201ENST00000258772 BCAR3O75815 825 aa19.85■□□□□ 0.77
DDX56-201ENST00000258772 C14orf93Q9H972 538 aaKnown RBP19.85■□□□□ 0.77
DDX56-201ENST00000258772 TRAK1Q9UPV9 953 aa19.85■□□□□ 0.77
DDX56-201ENST00000258772 DMRT2Q9Y5R5 561 aa19.85■□□□□ 0.77
DDX56-201ENST00000258772 PPLO60437 1756 aa19.84■□□□□ 0.77
DDX56-201ENST00000258772 NPATQ14207 1427 aa19.83■□□□□ 0.77
DDX56-201ENST00000258772 DDRGK1Q96HY6 314 aa19.82■□□□□ 0.76
DDX56-201ENST00000258772 NSD3Q9BZ95 1437 aa19.82■□□□□ 0.76
DDX56-201ENST00000258772 MORC1Q86VD1 984 aa19.81■□□□□ 0.76
DDX56-201ENST00000258772 SLC12A5Q9H2X9 1139 aa19.81■□□□□ 0.76
DDX56-201ENST00000258772 GGT6Q6P531 493 aa19.81■□□□□ 0.76
DDX56-201ENST00000258772 WWC1Q8IX03 1113 aa19.81■□□□□ 0.76
DDX56-201ENST00000258772 ZC3H13Q5T200 1668 aaKnown RBP19.8■□□□□ 0.76
DDX56-201ENST00000258772 ADGRB1O14514 1584 aa19.8■□□□□ 0.76
DDX56-201ENST00000258772 QRICH2Q9H0J4 1663 aa19.8■□□□□ 0.76
DDX56-201ENST00000258772 FAM161AQ3B820 660 aa19.8■□□□□ 0.76
DDX56-201ENST00000258772 LAS1LQ9Y4W2 734 aaKnown RBP19.8■□□□□ 0.76
DDX56-201ENST00000258772 RPGRIP1LQ68CZ1 1315 aa19.79■□□□□ 0.76
DDX56-201ENST00000258772 NPM1P06748 294 aaKnown RBP eCLIP19.79■□□□□ 0.76
DDX56-201ENST00000258772 TMEM132EQ6IEE7 984 aa19.79■□□□□ 0.76
DDX56-201ENST00000258772 MLH3Q9UHC1 1453 aa19.79■□□□□ 0.76
DDX56-201ENST00000258772 FRMPD1Q5SYB0 1578 aa19.79■□□□□ 0.76
DDX56-201ENST00000258772 POGZQ7Z3K3 1410 aa19.79■□□□□ 0.76
DDX56-201ENST00000258772 C8orf34Q49A92 452 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms