RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 CLTCL1P53675 1640 aa19.49■□□□□ 0.71
TRAFD1-201ENST00000257604 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
TRAFD1-201ENST00000257604 GPRASP1Q5JY77 1395 aa19.48■□□□□ 0.71
TRAFD1-201ENST00000257604 NPATQ14207 1427 aa19.48■□□□□ 0.71
TRAFD1-201ENST00000257604 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
TRAFD1-201ENST00000257604 PLIN1O60240 522 aa19.47■□□□□ 0.71
TRAFD1-201ENST00000257604 CABP2Q9NPB3 220 aa19.47■□□□□ 0.71
TRAFD1-201ENST00000257604 PPP4R2Q9NY27 417 aa19.46■□□□□ 0.71
TRAFD1-201ENST00000257604 CENPJQ9HC77 1338 aaPredicted RBP19.46■□□□□ 0.71
TRAFD1-201ENST00000257604 SRPK2P78362 688 aaKnown RBP19.46■□□□□ 0.71
TRAFD1-201ENST00000257604 KIDINS220Q9ULH0 1771 aa19.45■□□□□ 0.7
TRAFD1-201ENST00000257604 MINK1Q8N4C8 1332 aaPredicted RBP19.45■□□□□ 0.7
TRAFD1-201ENST00000257604 PPP2R1AP30153 589 aa19.45■□□□□ 0.7
TRAFD1-201ENST00000257604 BRD4O60885 1362 aaPredicted RBP19.45■□□□□ 0.7
TRAFD1-201ENST00000257604 COL17A1Q9UMD9 1497 aaPredicted RBP19.45■□□□□ 0.7
TRAFD1-201ENST00000257604 PTPRTO14522 1441 aa19.44■□□□□ 0.7
TRAFD1-201ENST00000257604 POGKQ9P215 609 aa19.44■□□□□ 0.7
TRAFD1-201ENST00000257604 TSPOAP1O95153 1857 aa19.44■□□□□ 0.7
TRAFD1-201ENST00000257604 EIF3AQ14152 1382 aaKnown RBP19.44■□□□□ 0.7
TRAFD1-201ENST00000257604 INO80Q9ULG1 1556 aaPredicted RBP19.44■□□□□ 0.7
TRAFD1-201ENST00000257604 CCDC136Q96JN2 1154 aa19.43■□□□□ 0.7
TRAFD1-201ENST00000257604 TRPM2O94759 1503 aa19.43■□□□□ 0.7
TRAFD1-201ENST00000257604 ARAP3Q8WWN8 1544 aa19.43■□□□□ 0.7
TRAFD1-201ENST00000257604 SCAF11Q99590 1463 aaKnown RBP19.43■□□□□ 0.7
TRAFD1-201ENST00000257604 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
TRAFD1-201ENST00000257604 CARD14Q9BXL6 1004 aa19.42■□□□□ 0.7
TRAFD1-201ENST00000257604 DEKP35659 375 aaKnown RBP19.41■□□□□ 0.7
TRAFD1-201ENST00000257604 VGFO15240 615 aaPredicted RBP19.41■□□□□ 0.7
TRAFD1-201ENST00000257604 AMER1Q5JTC6 1135 aaPredicted RBP19.4■□□□□ 0.7
TRAFD1-201ENST00000257604 PARD3Q8TEW0 1356 aa19.4■□□□□ 0.7
TRAFD1-201ENST00000257604 CEP152O94986 1710 aa19.39■□□□□ 0.7
TRAFD1-201ENST00000257604 SPHKAPQ2M3C7 1700 aa19.39■□□□□ 0.7
TRAFD1-201ENST00000257604 MORC1Q86VD1 984 aa19.39■□□□□ 0.69
TRAFD1-201ENST00000257604 TRHP20396 242 aaPredicted RBP19.38■□□□□ 0.69
TRAFD1-201ENST00000257604 RRP7AQ9Y3A4 280 aaKnown RBP19.38■□□□□ 0.69
TRAFD1-201ENST00000257604 NPM2Q86SE8 214 aaKnown RBP19.37■□□□□ 0.69
TRAFD1-201ENST00000257604 TET3O43151 1660 aa19.37■□□□□ 0.69
TRAFD1-201ENST00000257604 RCAN3Q9UKA8 241 aa19.37■□□□□ 0.69
TRAFD1-201ENST00000257604 NUTM2FA1L443 756 aa19.36■□□□□ 0.69
TRAFD1-201ENST00000257604 C14orf93Q9H972 538 aaKnown RBP19.36■□□□□ 0.69
TRAFD1-201ENST00000257604 PPM1GO15355 546 aaPredicted RBP19.36■□□□□ 0.69
TRAFD1-201ENST00000257604 APAF1O14727 1248 aa19.36■□□□□ 0.69
TRAFD1-201ENST00000257604 PPRC1Q5VV67 1664 aaKnown RBP19.35■□□□□ 0.69
TRAFD1-201ENST00000257604 POLR1AO95602 1720 aaPredicted RBP19.35■□□□□ 0.69
TRAFD1-201ENST00000257604 PRAM1Q96QH2 718 aa19.35■□□□□ 0.69
TRAFD1-201ENST00000257604 EIF2AK4Q9P2K8 1649 aaKnown RBP19.35■□□□□ 0.69
TRAFD1-201ENST00000257604 MLH3Q9UHC1 1453 aa19.34■□□□□ 0.69
TRAFD1-201ENST00000257604 MADDQ8WXG6 1647 aa19.34■□□□□ 0.69
TRAFD1-201ENST00000257604 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
TRAFD1-201ENST00000257604 STAC3Q96MF2 364 aa19.34■□□□□ 0.69
TRAFD1-201ENST00000257604 MROH1Q8NDA8 1641 aa19.33■□□□□ 0.69
TRAFD1-201ENST00000257604 EFCAB6Q5THR3 1501 aa19.33■□□□□ 0.69
TRAFD1-201ENST00000257604 HECW2Q9P2P5 1572 aa19.33■□□□□ 0.68
TRAFD1-201ENST00000257604 WAPLQ7Z5K2 1190 aa19.32■□□□□ 0.68
TRAFD1-201ENST00000257604 CEBPAP49715 358 aaPredicted RBP19.31■□□□□ 0.68
TRAFD1-201ENST00000257604 GGNBP2Q9H3C7 697 aa19.31■□□□□ 0.68
TRAFD1-201ENST00000257604 ABCA6Q8N139 1617 aa19.31■□□□□ 0.68
TRAFD1-201ENST00000257604 FRMPD1Q5SYB0 1578 aa19.31■□□□□ 0.68
TRAFD1-201ENST00000257604 FBLN1P23142 703 aa19.3■□□□□ 0.68
TRAFD1-201ENST00000257604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.3■□□□□ 0.68
TRAFD1-201ENST00000257604 RNF17Q9BXT8 1623 aaKnown RBP19.3■□□□□ 0.68
TRAFD1-201ENST00000257604 ANO8Q9HCE9 1232 aaPredicted RBP19.29■□□□□ 0.68
TRAFD1-201ENST00000257604 SMG6Q86US8 1419 aaKnown RBP19.29■□□□□ 0.68
TRAFD1-201ENST00000257604 LRPPRCP42704 1394 aaKnown RBP19.29■□□□□ 0.68
TRAFD1-201ENST00000257604 RTN4Q9NQC3 1192 aaKnown RBP19.28■□□□□ 0.68
TRAFD1-201ENST00000257604 NEO1Q92859 1461 aa19.28■□□□□ 0.68
TRAFD1-201ENST00000257604 U2SURPO15042 1029 aaKnown RBP19.28■□□□□ 0.68
TRAFD1-201ENST00000257604 SLC52A1Q9NWF4 448 aa19.28■□□□□ 0.68
TRAFD1-201ENST00000257604 SKAP1Q86WV1 359 aa19.27■□□□□ 0.68
TRAFD1-201ENST00000257604 DEPDC5O75140 1603 aa19.27■□□□□ 0.68
TRAFD1-201ENST00000257604 ABCC3O15438 1527 aa19.27■□□□□ 0.68
TRAFD1-201ENST00000257604 NSD3Q9BZ95 1437 aa19.27■□□□□ 0.67
TRAFD1-201ENST00000257604 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 RIMBP3CA6NJZ7 1639 aa19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 RIMBP3BA6NNM3 1639 aa19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 RIMBP3Q9UFD9 1639 aa19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 MTHFSP49914 203 aa19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 RRP1P56182 461 aaKnown RBP19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 ERICH6BQ5W0A0 696 aa19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 NOP58Q9Y2X3 529 aaKnown RBP19.26■□□□□ 0.67
TRAFD1-201ENST00000257604 KIF1BO60333 1816 aa19.25■□□□□ 0.67
TRAFD1-201ENST00000257604 MROH2AA6NES4 1674 aa19.25■□□□□ 0.67
TRAFD1-201ENST00000257604 VWDEQ8N2E2 1590 aa19.25■□□□□ 0.67
TRAFD1-201ENST00000257604 ERVK-7P63135 1459 aa19.24■□□□□ 0.67
TRAFD1-201ENST00000257604 TXNDC2Q86VQ3 553 aa19.24■□□□□ 0.67
TRAFD1-201ENST00000257604 SOX12O15370 315 aa19.23■□□□□ 0.67
TRAFD1-201ENST00000257604 U2AF1L5P0DN76 240 aaPredicted RBP19.22■□□□□ 0.67
TRAFD1-201ENST00000257604 U2AF1Q01081 240 aaKnown RBP eCLIP19.22■□□□□ 0.67
TRAFD1-201ENST00000257604 C20orf194Q5TEA3 1177 aa19.22■□□□□ 0.67
TRAFD1-201ENST00000257604 MAP3K4Q9Y6R4 1608 aa19.22■□□□□ 0.67
TRAFD1-201ENST00000257604 RPGRIP1LQ68CZ1 1315 aa19.21■□□□□ 0.67
TRAFD1-201ENST00000257604 PLEKHG5O94827 1062 aa19.21■□□□□ 0.67
TRAFD1-201ENST00000257604 CABP1Q9NZU7 370 aa19.21■□□□□ 0.67
TRAFD1-201ENST00000257604 SPINK5Q9NQ38 1064 aaPredicted RBP19.21■□□□□ 0.67
TRAFD1-201ENST00000257604 DIP2CQ9Y2E4 1556 aa19.21■□□□□ 0.67
TRAFD1-201ENST00000257604 NCKAP5LQ9HCH0 1330 aa19.21■□□□□ 0.66
TRAFD1-201ENST00000257604 GOLGA2Q08379 1002 aa19.2■□□□□ 0.66
TRAFD1-201ENST00000257604 PLEKHH1Q9ULM0 1364 aa19.2■□□□□ 0.66
TRAFD1-201ENST00000257604 DMRT2Q9Y5R5 561 aa19.2■□□□□ 0.66
TRAFD1-201ENST00000257604 CDK19Q9BWU1 502 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms