RNA–Protein interactions for RNA: ENST00000254271.8

LRRC9-201, Transcript of leucine rich repeat containing 9, humanhuman

TSL 2

Gene LRRC9, Length 4,915 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC9-201ENST00000254271 PAPPAQ13219 1627 aa4.28□□□□□ -1.72
LRRC9-201ENST00000254271 VIRMAQ69YN4 1812 aaKnown RBP4.28□□□□□ -1.72
LRRC9-201ENST00000254271 PHLPP1O60346 1717 aa4.28□□□□□ -1.72
LRRC9-201ENST00000254271 ARHGEF28Q8N1W1 1705 aaKnown RBP4.28□□□□□ -1.72
LRRC9-201ENST00000254271 PHRF1Q9P1Y6 1649 aaKnown RBP4.28□□□□□ -1.72
LRRC9-201ENST00000254271 NWD2Q9ULI1 1742 aa4.28□□□□□ -1.72
LRRC9-201ENST00000254271 ADGRB2O60241 1585 aa4.28□□□□□ -1.73
LRRC9-201ENST00000254271 ADGRB1O14514 1584 aa4.27□□□□□ -1.73
LRRC9-201ENST00000254271 GLI3P10071 1580 aa4.27□□□□□ -1.73
LRRC9-201ENST00000254271 CLIP1P30622 1438 aa4.27□□□□□ -1.73
LRRC9-201ENST00000254271 ANKRD26Q9UPS8 1709 aa4.27□□□□□ -1.73
LRRC9-201ENST00000254271 RGPD5Q99666 1765 aa4.26□□□□□ -1.73
LRRC9-201ENST00000254271 ABCC5O15440 1437 aa4.26□□□□□ -1.73
LRRC9-201ENST00000254271 BRCA1P38398 1863 aaKnown RBP4.26□□□□□ -1.73
LRRC9-201ENST00000254271 ARHGAP5Q13017 1502 aa4.26□□□□□ -1.73
LRRC9-201ENST00000254271 ADAMTS7Q9UKP4 1686 aa4.26□□□□□ -1.73
LRRC9-201ENST00000254271 FBXO41Q8TF61 875 aa4.26□□□□□ -1.73
LRRC9-201ENST00000254271 USP34Q70CQ2 3546 aa4.25□□□□□ -1.73
LRRC9-201ENST00000254271 TRPM2O94759 1503 aa4.25□□□□□ -1.73
LRRC9-201ENST00000254271 FMN1Q68DA7 1419 aa4.25□□□□□ -1.73
LRRC9-201ENST00000254271 AKAP12Q02952 1782 aa4.24□□□□□ -1.73
LRRC9-201ENST00000254271 DUOX2Q9NRD8 1548 aa4.24□□□□□ -1.73
LRRC9-201ENST00000254271 TOGARAM1Q9Y4F4 1720 aa4.24□□□□□ -1.73
LRRC9-201ENST00000254271 CAMTA1Q9Y6Y1 1673 aa4.24□□□□□ -1.73
LRRC9-201ENST00000254271 TRPM1Q7Z4N2 1603 aa4.24□□□□□ -1.73
LRRC9-201ENST00000254271 NLRP1Q9C000 1473 aa4.24□□□□□ -1.73
LRRC9-201ENST00000254271 MST1RQ04912 1400 aa4.23□□□□□ -1.73
LRRC9-201ENST00000254271 VPS8Q8N3P4 1428 aa4.23□□□□□ -1.73
LRRC9-201ENST00000254271 TRHP20396 242 aaPredicted RBP4.23□□□□□ -1.73
LRRC9-201ENST00000254271 CCDC141Q6ZP82 1450 aa4.23□□□□□ -1.73
LRRC9-201ENST00000254271 KIF1BO60333 1816 aa4.23□□□□□ -1.73
LRRC9-201ENST00000254271 ZMYM3Q14202 1370 aa4.22□□□□□ -1.73
LRRC9-201ENST00000254271 ZNF644Q9H582 1327 aaPredicted RBP4.22□□□□□ -1.73
LRRC9-201ENST00000254271 PLEKHH2Q8IVE3 1493 aa4.22□□□□□ -1.73
LRRC9-201ENST00000254271 AFAP1Q8N556 730 aa4.22□□□□□ -1.73
LRRC9-201ENST00000254271 MAP2P11137 1827 aaKnown RBP4.22□□□□□ -1.73
LRRC9-201ENST00000254271 DHX29Q7Z478 1369 aaKnown RBP4.21□□□□□ -1.74
LRRC9-201ENST00000254271 KIAA1210Q9ULL0 1709 aa4.21□□□□□ -1.74
LRRC9-201ENST00000254271 PARP4Q9UKK3 1724 aaKnown RBP4.21□□□□□ -1.74
LRRC9-201ENST00000254271 PXDNQ92626 1479 aa4.21□□□□□ -1.74
LRRC9-201ENST00000254271 TAF1LQ8IZX4 1826 aa4.21□□□□□ -1.74
LRRC9-201ENST00000254271 NKTRP30414 1462 aaKnown RBP4.21□□□□□ -1.74
LRRC9-201ENST00000254271 RPRD2Q5VT52 1461 aaKnown RBP4.21□□□□□ -1.74
LRRC9-201ENST00000254271 CNTLNQ9NXG0 1405 aa4.21□□□□□ -1.74
LRRC9-201ENST00000254271 CSRNP3Q8WYN3 585 aa4.2□□□□□ -1.74
LRRC9-201ENST00000254271 DNAH14Q0VDD8 3507 aa4.2□□□□□ -1.74
LRRC9-201ENST00000254271 CICQ96RK0 1608 aaPredicted RBP4.2□□□□□ -1.74
LRRC9-201ENST00000254271 ERBINQ96RT1 1412 aa4.2□□□□□ -1.74
LRRC9-201ENST00000254271 KIF13BQ9NQT8 1826 aa4.2□□□□□ -1.74
LRRC9-201ENST00000254271 FAM208AQ9UK61 1670 aaKnown RBP4.2□□□□□ -1.74
LRRC9-201ENST00000254271 MYO15AQ9UKN7 3530 aa4.2□□□□□ -1.74
LRRC9-201ENST00000254271 LY75O60449 1722 aa4.19□□□□□ -1.74
LRRC9-201ENST00000254271 ZNF646O15015 1829 aaPredicted RBP4.19□□□□□ -1.74
LRRC9-201ENST00000254271 CDC42BPGQ6DT37 1551 aa4.19□□□□□ -1.74
LRRC9-201ENST00000254271 MIA2Q96PC5 1412 aa4.19□□□□□ -1.74
LRRC9-201ENST00000254271 MYOM1P52179 1685 aa4.18□□□□□ -1.74
LRRC9-201ENST00000254271 TECPR2O15040 1411 aa4.18□□□□□ -1.74
LRRC9-201ENST00000254271 RGPD2P0DJD1 1756 aa4.18□□□□□ -1.74
LRRC9-201ENST00000254271 MON2Q7Z3U7 1717 aa4.18□□□□□ -1.74
LRRC9-201ENST00000254271 A0A0C4DFX4 3053 aa4.18□□□□□ -1.74
LRRC9-201ENST00000254271 DAPK1P53355 1430 aa4.18□□□□□ -1.74
LRRC9-201ENST00000254271 PLPPR3Q6T4P5 718 aa4.17□□□□□ -1.74
LRRC9-201ENST00000254271 HSPA2P54652 639 aa4.17□□□□□ -1.74
LRRC9-201ENST00000254271 SPATA31E1Q6ZUB1 1445 aa4.17□□□□□ -1.74
LRRC9-201ENST00000254271 LAMB1P07942 1786 aa4.17□□□□□ -1.74
LRRC9-201ENST00000254271 MYOM2P54296 1465 aa4.17□□□□□ -1.74
LRRC9-201ENST00000254271 CEBPAP49715 358 aaPredicted RBP4.17□□□□□ -1.74
LRRC9-201ENST00000254271 PIK3C2AO00443 1686 aa4.17□□□□□ -1.74
LRRC9-201ENST00000254271 CDK12Q9NYV4 1490 aaPredicted RBP4.16□□□□□ -1.74
LRRC9-201ENST00000254271 FAM135BQ49AJ0 1406 aa4.16□□□□□ -1.74
LRRC9-201ENST00000254271 ZNF335Q9H4Z2 1342 aaPredicted RBP4.16□□□□□ -1.74
LRRC9-201ENST00000254271 PIAS4Q8N2W9 510 aaPredicted RBP4.16□□□□□ -1.74
LRRC9-201ENST00000254271 UHRF1BP1Q6BDS2 1440 aa4.16□□□□□ -1.74
LRRC9-201ENST00000254271 CERKQ8TCT0 537 aa4.16□□□□□ -1.74
LRRC9-201ENST00000254271 MYOM3Q5VTT5 1437 aa4.15□□□□□ -1.74
LRRC9-201ENST00000254271 LRRC37A3O60309 1634 aa4.15□□□□□ -1.75
LRRC9-201ENST00000254271 PPP6R1Q9UPN7 881 aa4.15□□□□□ -1.75
LRRC9-201ENST00000254271 LTKP29376 864 aa4.14□□□□□ -1.75
LRRC9-201ENST00000254271 KANK4Q5T7N3 995 aaPredicted RBP4.14□□□□□ -1.75
LRRC9-201ENST00000254271 ZNF831Q5JPB2 1677 aa4.14□□□□□ -1.75
LRRC9-201ENST00000254271 RRBP1Q9P2E9 1410 aaKnown RBP4.13□□□□□ -1.75
LRRC9-201ENST00000254271 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.13□□□□□ -1.75
LRRC9-201ENST00000254271 WDFY4Q6ZS81 3184 aa4.13□□□□□ -1.75
LRRC9-201ENST00000254271 SUPT5HO00267 1087 aaKnown RBP4.13□□□□□ -1.75
LRRC9-201ENST00000254271 FGD6Q6ZV73 1430 aa4.13□□□□□ -1.75
LRRC9-201ENST00000254271 SETD5Q9C0A6 1442 aa4.13□□□□□ -1.75
LRRC9-201ENST00000254271 SIPA1L3O60292 1781 aaPredicted RBP4.12□□□□□ -1.75
LRRC9-201ENST00000254271 SOCS7O14512 581 aa4.12□□□□□ -1.75
LRRC9-201ENST00000254271 NCOA3Q9Y6Q9 1424 aa4.12□□□□□ -1.75
LRRC9-201ENST00000254271 RGPD1P0DJD0 1748 aa4.11□□□□□ -1.75
LRRC9-201ENST00000254271 ZFHX4Q86UP3 3567 aa4.11□□□□□ -1.75
LRRC9-201ENST00000254271 DLC1Q96QB1 1528 aa4.11□□□□□ -1.75
LRRC9-201ENST00000254271 NPHP4O75161 1426 aaPredicted RBP4.11□□□□□ -1.75
LRRC9-201ENST00000254271 CACNB1Q02641 598 aaPredicted RBP4.11□□□□□ -1.75
LRRC9-201ENST00000254271 COL5A3P25940 1745 aaPredicted RBP4.11□□□□□ -1.75
LRRC9-201ENST00000254271 SLIT2O94813 1529 aa4.11□□□□□ -1.75
LRRC9-201ENST00000254271 DCCP43146 1447 aa4.1□□□□□ -1.75
LRRC9-201ENST00000254271 LTN1O94822 1766 aa4.1□□□□□ -1.75
LRRC9-201ENST00000254271 NAIPQ13075 1403 aa4.1□□□□□ -1.75
LRRC9-201ENST00000254271 ITSN1Q15811 1721 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms