RNA–Protein interactions for RNA: ENST00000251654.8

PCCB-201, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCCB, Length 1,833 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-201ENST00000251654 SLC52A1Q9NWF4 448 aa24.06■■□□□ 1.44
PCCB-201ENST00000251654 TMEM131LA2VDJ0 1609 aa24.06■■□□□ 1.44
PCCB-201ENST00000251654 CHGAP10645 457 aaKnown RBP24.05■■□□□ 1.44
PCCB-201ENST00000251654 SPATA31D1Q6ZQQ2 1576 aa24.05■■□□□ 1.44
PCCB-201ENST00000251654 MYO5BQ9ULV0 1848 aa24.05■■□□□ 1.44
PCCB-201ENST00000251654 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
PCCB-201ENST00000251654 ANP32CO43423 234 aa24.05■■□□□ 1.44
PCCB-201ENST00000251654 IDI1Q13907 227 aa24.05■■□□□ 1.44
PCCB-201ENST00000251654 PIK3C2GO75747 1445 aa24.03■■□□□ 1.44
PCCB-201ENST00000251654 RPGRIP1LQ68CZ1 1315 aa24.03■■□□□ 1.44
PCCB-201ENST00000251654 MLECQ14165 292 aa24.03■■□□□ 1.44
PCCB-201ENST00000251654 FBXO31Q5XUX0 539 aaPredicted RBP24.03■■□□□ 1.44
PCCB-201ENST00000251654 SCAF11Q99590 1463 aaKnown RBP24.02■■□□□ 1.44
PCCB-201ENST00000251654 TESK2Q96S53 571 aa24.01■■□□□ 1.43
PCCB-201ENST00000251654 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
PCCB-201ENST00000251654 YTHDC1Q96MU7 727 aaKnown RBP23.98■■□□□ 1.43
PCCB-201ENST00000251654 CFAP70Q5T0N1 1121 aa23.98■■□□□ 1.43
PCCB-201ENST00000251654 CCER2I3L3R5 266 aa23.96■■□□□ 1.43
PCCB-201ENST00000251654 ZMYM3Q14202 1370 aa23.94■■□□□ 1.42
PCCB-201ENST00000251654 DISP3Q9P2K9 1392 aa23.94■■□□□ 1.42
PCCB-201ENST00000251654 ZFYVE9O95405 1425 aa23.94■■□□□ 1.42
PCCB-201ENST00000251654 ADGRB1O14514 1584 aa23.94■■□□□ 1.42
PCCB-201ENST00000251654 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
PCCB-201ENST00000251654 EIF3AQ14152 1382 aaKnown RBP23.91■■□□□ 1.42
PCCB-201ENST00000251654 C14orf93Q9H972 538 aaKnown RBP23.91■■□□□ 1.42
PCCB-201ENST00000251654 MYO3AQ8NEV4 1616 aa23.91■■□□□ 1.42
PCCB-201ENST00000251654 VGFO15240 615 aaPredicted RBP23.9■■□□□ 1.42
PCCB-201ENST00000251654 ESF1Q9H501 851 aaKnown RBP23.9■■□□□ 1.42
PCCB-201ENST00000251654 CENPBP07199 599 aaPredicted RBP23.89■■□□□ 1.42
PCCB-201ENST00000251654 A2ML1A8K2U0 1454 aa23.88■■□□□ 1.41
PCCB-201ENST00000251654 TMF1P82094 1093 aa23.87■■□□□ 1.41
PCCB-201ENST00000251654 PRKRIP1Q9H875 184 aaPredicted RBP23.87■■□□□ 1.41
PCCB-201ENST00000251654 NUTM2DQ5VT03 806 aaPredicted RBP23.86■■□□□ 1.41
PCCB-201ENST00000251654 FER1L4A9Z1Z3 1794 aa23.83■■□□□ 1.4
PCCB-201ENST00000251654 KDM5AP29375 1690 aaKnown RBP23.82■■□□□ 1.4
PCCB-201ENST00000251654 ASXL1Q8IXJ9 1541 aa23.81■■□□□ 1.4
PCCB-201ENST00000251654 TNRQ92752 1358 aa23.8■■□□□ 1.4
PCCB-201ENST00000251654 SBNO2Q9Y2G9 1366 aa23.8■■□□□ 1.4
PCCB-201ENST00000251654 C3P01024 1663 aa23.8■■□□□ 1.4
PCCB-201ENST00000251654 ARHGEF28Q8N1W1 1705 aaKnown RBP23.79■■□□□ 1.4
PCCB-201ENST00000251654 STAG3Q9UJ98 1225 aa23.79■■□□□ 1.4
PCCB-201ENST00000251654 QRICH2Q9H0J4 1663 aa23.78■■□□□ 1.4
PCCB-201ENST00000251654 TMEM132EQ6IEE7 984 aa23.78■■□□□ 1.4
PCCB-201ENST00000251654 MYOM1P52179 1685 aa23.78■■□□□ 1.4
PCCB-201ENST00000251654 UBR1Q8IWV7 1749 aa23.77■■□□□ 1.4
PCCB-201ENST00000251654 RIMS2Q9UQ26 1411 aa23.75■■□□□ 1.39
PCCB-201ENST00000251654 ALKQ9UM73 1620 aa23.75■■□□□ 1.39
PCCB-201ENST00000251654 CENPJQ9HC77 1338 aaPredicted RBP23.74■■□□□ 1.39
PCCB-201ENST00000251654 CDCA8Q53HL2 280 aa23.73■■□□□ 1.39
PCCB-201ENST00000251654 TRAK1Q9UPV9 953 aa23.73■■□□□ 1.39
PCCB-201ENST00000251654 SETD1AO15047 1707 aaKnown RBP23.73■■□□□ 1.39
PCCB-201ENST00000251654 PER1O15534 1290 aaPredicted RBP23.72■■□□□ 1.39
PCCB-201ENST00000251654 SLC24A1O60721 1099 aa23.72■■□□□ 1.39
PCCB-201ENST00000251654 NLRP1Q9C000 1473 aa23.71■■□□□ 1.39
PCCB-201ENST00000251654 NRXN3Q9Y4C0 1643 aa23.7■■□□□ 1.38
PCCB-201ENST00000251654 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
PCCB-201ENST00000251654 PTPRMP28827 1452 aa23.68■■□□□ 1.38
PCCB-201ENST00000251654 CEBPAP49715 358 aaPredicted RBP23.68■■□□□ 1.38
PCCB-201ENST00000251654 KTN1Q86UP2 1357 aaKnown RBP23.67■■□□□ 1.38
PCCB-201ENST00000251654 PANK3Q9H999 370 aa23.67■■□□□ 1.38
PCCB-201ENST00000251654 YTHDC2Q9H6S0 1430 aaKnown RBP23.66■■□□□ 1.38
PCCB-201ENST00000251654 SENP3Q9H4L4 574 aaPredicted RBP23.65■■□□□ 1.38
PCCB-201ENST00000251654 TMEM2Q9UHN6 1383 aa23.65■■□□□ 1.38
PCCB-201ENST00000251654 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.63■■□□□ 1.37
PCCB-201ENST00000251654 PARD3Q8TEW0 1356 aa23.63■■□□□ 1.37
PCCB-201ENST00000251654 TULP4Q9NRJ4 1543 aa23.62■■□□□ 1.37
PCCB-201ENST00000251654 CNGB1Q14028 1251 aaPredicted RBP23.62■■□□□ 1.37
PCCB-201ENST00000251654 MRS2Q9HD23 443 aa23.62■■□□□ 1.37
PCCB-201ENST00000251654 RIMS1Q86UR5 1692 aaKnown RBP23.61■■□□□ 1.37
PCCB-201ENST00000251654 RALBP1Q15311 655 aa23.6■■□□□ 1.37
PCCB-201ENST00000251654 ADAMTSL3P82987 1691 aa23.6■■□□□ 1.37
PCCB-201ENST00000251654 STK26Q9P289 416 aa23.58■■□□□ 1.37
PCCB-201ENST00000251654 DLC1Q96QB1 1528 aa23.57■■□□□ 1.36
PCCB-201ENST00000251654 MYBBP1AQ9BQG0 1328 aaKnown RBP23.56■■□□□ 1.36
PCCB-201ENST00000251654 SLIT1O75093 1534 aa23.56■■□□□ 1.36
PCCB-201ENST00000251654 HDGFP51858 240 aaKnown RBP23.56■■□□□ 1.36
PCCB-201ENST00000251654 ARHGAP23Q9P227 1491 aa23.55■■□□□ 1.36
PCCB-201ENST00000251654 LRPPRCP42704 1394 aaKnown RBP23.55■■□□□ 1.36
PCCB-201ENST00000251654 KNDC1Q76NI1 1749 aa23.53■■□□□ 1.36
PCCB-201ENST00000251654 PRAM1Q96QH2 718 aa23.52■■□□□ 1.36
PCCB-201ENST00000251654 METP08581 1390 aa23.52■■□□□ 1.36
PCCB-201ENST00000251654 BRD4O60885 1362 aaPredicted RBP23.52■■□□□ 1.36
PCCB-201ENST00000251654 AMER1Q5JTC6 1135 aaPredicted RBP23.52■■□□□ 1.36
PCCB-201ENST00000251654 EVC2Q86UK5 1308 aa23.52■■□□□ 1.36
PCCB-201ENST00000251654 PUS7Q96PZ0 661 aaKnown RBP23.52■■□□□ 1.36
PCCB-201ENST00000251654 ABCC11Q96J66 1382 aa23.51■■□□□ 1.35
PCCB-201ENST00000251654 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
PCCB-201ENST00000251654 CC2D1BQ5T0F9 858 aaKnown RBP23.51■■□□□ 1.35
PCCB-201ENST00000251654 KNSTRNQ9Y448 316 aa23.51■■□□□ 1.35
PCCB-201ENST00000251654 ADAMTS13Q76LX8 1427 aa23.5■■□□□ 1.35
PCCB-201ENST00000251654 NPC1L1Q9UHC9 1359 aa23.5■■□□□ 1.35
PCCB-201ENST00000251654 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
PCCB-201ENST00000251654 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
PCCB-201ENST00000251654 PLPPR3Q6T4P5 718 aa23.5■■□□□ 1.35
PCCB-201ENST00000251654 CEP170BQ9Y4F5 1589 aaPredicted RBP23.5■■□□□ 1.35
PCCB-201ENST00000251654 LTKP29376 864 aa23.49■■□□□ 1.35
PCCB-201ENST00000251654 FAM9BQ8IZU0 186 aa23.48■■□□□ 1.35
PCCB-201ENST00000251654 TECPR2O15040 1411 aa23.48■■□□□ 1.35
PCCB-201ENST00000251654 NLRP13Q86W25 1043 aa23.47■■□□□ 1.35
PCCB-201ENST00000251654 CPS1P31327 1500 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms