RNA–Protein interactions for RNA: ENST00000251241.8

DHX40-201, Transcript of DEAH-box helicase 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHX40, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-201ENST00000251241 GSE1Q14687 1217 aa12.74□□□□□ -0.37
DHX40-201ENST00000251241 CARD11Q9BXL7 1154 aa12.74□□□□□ -0.37
DHX40-201ENST00000251241 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
DHX40-201ENST00000251241 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
DHX40-201ENST00000251241 DHX29Q7Z478 1369 aaKnown RBP12.73□□□□□ -0.37
DHX40-201ENST00000251241 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
DHX40-201ENST00000251241 MLH3Q9UHC1 1453 aa12.72□□□□□ -0.37
DHX40-201ENST00000251241 MAST1Q9Y2H9 1570 aa12.72□□□□□ -0.37
DHX40-201ENST00000251241 E9PSI1 815 aa12.72□□□□□ -0.37
DHX40-201ENST00000251241 A2MP01023 1474 aa12.72□□□□□ -0.37
DHX40-201ENST00000251241 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
DHX40-201ENST00000251241 DUOX2Q9NRD8 1548 aa12.72□□□□□ -0.37
DHX40-201ENST00000251241 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
DHX40-201ENST00000251241 RICTORQ6R327 1708 aa12.71□□□□□ -0.37
DHX40-201ENST00000251241 KDM5CP41229 1560 aa12.71□□□□□ -0.38
DHX40-201ENST00000251241 INO80Q9ULG1 1556 aaPredicted RBP12.7□□□□□ -0.38
DHX40-201ENST00000251241 TULP1O00294 542 aaPredicted RBP12.69□□□□□ -0.38
DHX40-201ENST00000251241 ESF1Q9H501 851 aaKnown RBP12.69□□□□□ -0.38
DHX40-201ENST00000251241 PLXNC1O60486 1568 aa12.69□□□□□ -0.38
DHX40-201ENST00000251241 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
DHX40-201ENST00000251241 KANK1Q14678 1352 aa12.68□□□□□ -0.38
DHX40-201ENST00000251241 WASHC2CQ9Y4E1 1318 aa12.68□□□□□ -0.38
DHX40-201ENST00000251241 RPRD2Q5VT52 1461 aaKnown RBP12.68□□□□□ -0.38
DHX40-201ENST00000251241 ERBINQ96RT1 1412 aa12.68□□□□□ -0.38
DHX40-201ENST00000251241 CCDC7Q96M83 1385 aa12.68□□□□□ -0.38
DHX40-201ENST00000251241 KIF7Q2M1P5 1343 aa12.67□□□□□ -0.38
DHX40-201ENST00000251241 ABCA6Q8N139 1617 aa12.67□□□□□ -0.38
DHX40-201ENST00000251241 ATP10AO60312 1499 aa12.66□□□□□ -0.38
DHX40-201ENST00000251241 ZFP91Q96JP5 570 aaPredicted RBP12.66□□□□□ -0.38
DHX40-201ENST00000251241 CCDC184Q52MB2 194 aa12.66□□□□□ -0.38
DHX40-201ENST00000251241 USP47Q96K76 1375 aa12.66□□□□□ -0.38
DHX40-201ENST00000251241 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
DHX40-201ENST00000251241 DIP2CQ9Y2E4 1556 aa12.65□□□□□ -0.38
DHX40-201ENST00000251241 MAGI2Q86UL8 1455 aa12.65□□□□□ -0.38
DHX40-201ENST00000251241 PRKRIP1Q9H875 184 aaPredicted RBP12.65□□□□□ -0.38
DHX40-201ENST00000251241 RRAGDQ9NQL2 400 aaPredicted RBP12.65□□□□□ -0.38
DHX40-201ENST00000251241 PZPP20742 1482 aa12.64□□□□□ -0.39
DHX40-201ENST00000251241 ST20-MTHFSA0A0A6YYL1 179 aa12.63□□□□□ -0.39
DHX40-201ENST00000251241 ZMYM4Q5VZL5 1548 aa12.63□□□□□ -0.39
DHX40-201ENST00000251241 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
DHX40-201ENST00000251241 CNTLNQ9NXG0 1405 aa12.62□□□□□ -0.39
DHX40-201ENST00000251241 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
DHX40-201ENST00000251241 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
DHX40-201ENST00000251241 TMC1Q8TDI8 760 aa12.61□□□□□ -0.39
DHX40-201ENST00000251241 ROCK2O75116 1388 aaKnown RBP12.61□□□□□ -0.39
DHX40-201ENST00000251241 FAM135AQ9P2D6 1515 aa12.61□□□□□ -0.39
DHX40-201ENST00000251241 CERS3Q8IU89 383 aa12.6□□□□□ -0.39
DHX40-201ENST00000251241 AEBP1Q8IUX7 1158 aa12.6□□□□□ -0.39
DHX40-201ENST00000251241 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
DHX40-201ENST00000251241 CCDC144AA2RUR9 1427 aa12.6□□□□□ -0.39
DHX40-201ENST00000251241 ZBTB7CA1YPR0 619 aa12.59□□□□□ -0.39
DHX40-201ENST00000251241 ARHGEF40Q8TER5 1519 aa12.58□□□□□ -0.4
DHX40-201ENST00000251241 CDK11BP21127 795 aaKnown RBP12.58□□□□□ -0.4
DHX40-201ENST00000251241 CFAP65Q6ZU64 1925 aaKnown RBP12.58□□□□□ -0.4
DHX40-201ENST00000251241 ANP32BQ92688 251 aaKnown RBP12.57□□□□□ -0.4
DHX40-201ENST00000251241 PPP4R2Q9NY27 417 aa12.56□□□□□ -0.4
DHX40-201ENST00000251241 FAM13BQ9NYF5 915 aa12.56□□□□□ -0.4
DHX40-201ENST00000251241 STAC3Q96MF2 364 aa12.56□□□□□ -0.4
DHX40-201ENST00000251241 NBPF1Q3BBV0 1214 aa12.56□□□□□ -0.4
DHX40-201ENST00000251241 UNC13BO14795 1591 aa12.55□□□□□ -0.4
DHX40-201ENST00000251241 FBXO31Q5XUX0 539 aaPredicted RBP12.55□□□□□ -0.4
DHX40-201ENST00000251241 EIF2AK4Q9P2K8 1649 aaKnown RBP12.55□□□□□ -0.4
DHX40-201ENST00000251241 SECISBP2LQ93073 1101 aaKnown RBP12.55□□□□□ -0.4
DHX40-201ENST00000251241 CEBPAP49715 358 aaPredicted RBP12.54□□□□□ -0.4
DHX40-201ENST00000251241 NFKBIBQ15653 356 aa12.54□□□□□ -0.4
DHX40-201ENST00000251241 PPM1GO15355 546 aaPredicted RBP12.54□□□□□ -0.4
DHX40-201ENST00000251241 BRD2P25440 801 aaKnown RBP12.53□□□□□ -0.4
DHX40-201ENST00000251241 GZF1Q9H116 711 aaPredicted RBP12.53□□□□□ -0.4
DHX40-201ENST00000251241 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.4
DHX40-201ENST00000251241 KDM5DQ9BY66 1539 aa12.52□□□□□ -0.4
DHX40-201ENST00000251241 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
DHX40-201ENST00000251241 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
DHX40-201ENST00000251241 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.41
DHX40-201ENST00000251241 CEP152O94986 1710 aa12.52□□□□□ -0.41
DHX40-201ENST00000251241 PRDM15P57071 1507 aaPredicted RBP12.52□□□□□ -0.41
DHX40-201ENST00000251241 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
DHX40-201ENST00000251241 ZNF526Q8TF50 670 aaPredicted RBP12.51□□□□□ -0.41
DHX40-201ENST00000251241 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
DHX40-201ENST00000251241 MROH1Q8NDA8 1641 aa12.51□□□□□ -0.41
DHX40-201ENST00000251241 SIGLEC1Q9BZZ2 1709 aa12.51□□□□□ -0.41
DHX40-201ENST00000251241 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
DHX40-201ENST00000251241 AGLP35573 1532 aa12.5□□□□□ -0.41
DHX40-201ENST00000251241 ABCC3O15438 1527 aa12.5□□□□□ -0.41
DHX40-201ENST00000251241 DEPDC5O75140 1603 aa12.5□□□□□ -0.41
DHX40-201ENST00000251241 ZBTB9Q96C00 473 aa12.5□□□□□ -0.41
DHX40-201ENST00000251241 PPP6R1Q9UPN7 881 aa12.5□□□□□ -0.41
DHX40-201ENST00000251241 RNF17Q9BXT8 1623 aaKnown RBP12.49□□□□□ -0.41
DHX40-201ENST00000251241 NPATQ14207 1427 aa12.49□□□□□ -0.41
DHX40-201ENST00000251241 ZBTB22O15209 634 aa12.49□□□□□ -0.41
DHX40-201ENST00000251241 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
DHX40-201ENST00000251241 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
DHX40-201ENST00000251241 IPO4Q8TEX9 1081 aaKnown RBP12.48□□□□□ -0.41
DHX40-201ENST00000251241 PRDM4Q9UKN5 801 aa12.48□□□□□ -0.41
DHX40-201ENST00000251241 SPATA31E1Q6ZUB1 1445 aa12.48□□□□□ -0.41
DHX40-201ENST00000251241 REREQ9P2R6 1566 aa12.48□□□□□ -0.41
DHX40-201ENST00000251241 DNTTIP2Q5QJE6 756 aaKnown RBP12.47□□□□□ -0.41
DHX40-201ENST00000251241 TET3O43151 1660 aa12.47□□□□□ -0.41
DHX40-201ENST00000251241 E9PCH4 1651 aa12.47□□□□□ -0.41
DHX40-201ENST00000251241 NUTM2DQ5VT03 806 aaPredicted RBP12.47□□□□□ -0.41
DHX40-201ENST00000251241 CNPY4Q8N129 248 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms