RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 RNF17Q9BXT8 1623 aaKnown RBP20■□□□□ 0.79
MBD4-201ENST00000249910 ZBED9Q6R2W3 1325 aa19.99■□□□□ 0.79
MBD4-201ENST00000249910 MYBBP1AQ9BQG0 1328 aaKnown RBP19.99■□□□□ 0.79
MBD4-201ENST00000249910 LAMC1P11047 1609 aa19.98■□□□□ 0.79
MBD4-201ENST00000249910 LMTK2Q8IWU2 1503 aa19.98■□□□□ 0.79
MBD4-201ENST00000249910 SCAF11Q99590 1463 aaKnown RBP19.97■□□□□ 0.79
MBD4-201ENST00000249910 NOS1P29475 1434 aa19.97■□□□□ 0.79
MBD4-201ENST00000249910 KTN1Q86UP2 1357 aaKnown RBP19.96■□□□□ 0.79
MBD4-201ENST00000249910 TMEM132EQ6IEE7 984 aa19.95■□□□□ 0.78
MBD4-201ENST00000249910 MAP3K4Q9Y6R4 1608 aa19.94■□□□□ 0.78
MBD4-201ENST00000249910 ABCC3O15438 1527 aa19.94■□□□□ 0.78
MBD4-201ENST00000249910 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
MBD4-201ENST00000249910 PARD3Q8TEW0 1356 aa19.93■□□□□ 0.78
MBD4-201ENST00000249910 TRAK1Q9UPV9 953 aa19.93■□□□□ 0.78
MBD4-201ENST00000249910 IDI1Q13907 227 aa19.92■□□□□ 0.78
MBD4-201ENST00000249910 NLRP13Q86W25 1043 aa19.92■□□□□ 0.78
MBD4-201ENST00000249910 SALL2Q9Y467 1007 aaPredicted RBP19.92■□□□□ 0.78
MBD4-201ENST00000249910 MROH2AA6NES4 1674 aa19.91■□□□□ 0.78
MBD4-201ENST00000249910 BRD4O60885 1362 aaPredicted RBP19.91■□□□□ 0.78
MBD4-201ENST00000249910 RICTORQ6R327 1708 aa19.9■□□□□ 0.78
MBD4-201ENST00000249910 KIF1BO60333 1816 aa19.9■□□□□ 0.78
MBD4-201ENST00000249910 FBXO31Q5XUX0 539 aaPredicted RBP19.9■□□□□ 0.78
MBD4-201ENST00000249910 KNSTRNQ9Y448 316 aa19.9■□□□□ 0.78
MBD4-201ENST00000249910 TSPOAP1O95153 1857 aa19.89■□□□□ 0.78
MBD4-201ENST00000249910 MYOM2P54296 1465 aa19.89■□□□□ 0.77
MBD4-201ENST00000249910 EIF3AQ14152 1382 aaKnown RBP19.88■□□□□ 0.77
MBD4-201ENST00000249910 IQGAP1P46940 1657 aa19.88■□□□□ 0.77
MBD4-201ENST00000249910 MLECQ14165 292 aa19.87■□□□□ 0.77
MBD4-201ENST00000249910 CDCA8Q53HL2 280 aa19.87■□□□□ 0.77
MBD4-201ENST00000249910 ADGRB3O60242 1522 aa19.87■□□□□ 0.77
MBD4-201ENST00000249910 C14orf93Q9H972 538 aaKnown RBP19.86■□□□□ 0.77
MBD4-201ENST00000249910 GLI2P10070 1586 aa19.86■□□□□ 0.77
MBD4-201ENST00000249910 DIP2BQ9P265 1576 aa19.86■□□□□ 0.77
MBD4-201ENST00000249910 NEURL4Q96JN8 1562 aa19.85■□□□□ 0.77
MBD4-201ENST00000249910 SIGLEC1Q9BZZ2 1709 aa19.85■□□□□ 0.77
MBD4-201ENST00000249910 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
MBD4-201ENST00000249910 AMER1Q5JTC6 1135 aaPredicted RBP19.84■□□□□ 0.77
MBD4-201ENST00000249910 NRXN1Q9ULB1 1477 aa19.83■□□□□ 0.77
MBD4-201ENST00000249910 CAMSAP1Q5T5Y3 1602 aa19.83■□□□□ 0.76
MBD4-201ENST00000249910 PIK3C2GO75747 1445 aa19.82■□□□□ 0.76
MBD4-201ENST00000249910 CENPJQ9HC77 1338 aaPredicted RBP19.81■□□□□ 0.76
MBD4-201ENST00000249910 RPGRIP1LQ68CZ1 1315 aa19.8■□□□□ 0.76
MBD4-201ENST00000249910 VGFO15240 615 aaPredicted RBP19.8■□□□□ 0.76
MBD4-201ENST00000249910 SYNMO15061 1565 aa19.8■□□□□ 0.76
MBD4-201ENST00000249910 SAFB2Q14151 953 aaKnown RBP eCLIP19.8■□□□□ 0.76
MBD4-201ENST00000249910 SLC52A1Q9NWF4 448 aa19.79■□□□□ 0.76
MBD4-201ENST00000249910 ERVK-7P63135 1459 aa19.79■□□□□ 0.76
MBD4-201ENST00000249910 IFT172Q9UG01 1749 aa19.79■□□□□ 0.76
MBD4-201ENST00000249910 CARD14Q9BXL6 1004 aa19.79■□□□□ 0.76
MBD4-201ENST00000249910 ARHGAP31Q2M1Z3 1444 aa19.78■□□□□ 0.76
MBD4-201ENST00000249910 KIAA1210Q9ULL0 1709 aa19.78■□□□□ 0.76
MBD4-201ENST00000249910 NUDCQ9Y266 331 aa19.78■□□□□ 0.76
MBD4-201ENST00000249910 PPP2R1AP30153 589 aa19.77■□□□□ 0.76
MBD4-201ENST00000249910 STK26Q9P289 416 aa19.77■□□□□ 0.76
MBD4-201ENST00000249910 SLC12A5Q9H2X9 1139 aa19.76■□□□□ 0.75
MBD4-201ENST00000249910 STAG3Q9UJ98 1225 aa19.75■□□□□ 0.75
MBD4-201ENST00000249910 ADAMTS8Q9UP79 889 aa19.74■□□□□ 0.75
MBD4-201ENST00000249910 PPLO60437 1756 aa19.74■□□□□ 0.75
MBD4-201ENST00000249910 SMG6Q86US8 1419 aaKnown RBP19.74■□□□□ 0.75
MBD4-201ENST00000249910 ADGRB1O14514 1584 aa19.73■□□□□ 0.75
MBD4-201ENST00000249910 ANP32EQ9BTT0 268 aa19.73■□□□□ 0.75
MBD4-201ENST00000249910 TSHZ2Q9NRE2 1034 aa19.73■□□□□ 0.75
MBD4-201ENST00000249910 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
MBD4-201ENST00000249910 ZMYM4Q5VZL5 1548 aa19.72■□□□□ 0.75
MBD4-201ENST00000249910 CDCA7LQ96GN5 454 aa19.71■□□□□ 0.75
MBD4-201ENST00000249910 PIK3C2BO00750 1634 aa19.71■□□□□ 0.75
MBD4-201ENST00000249910 NEXMIFQ5QGS0 1516 aa19.7■□□□□ 0.74
MBD4-201ENST00000249910 ASXL1Q8IXJ9 1541 aa19.69■□□□□ 0.74
MBD4-201ENST00000249910 SBNO2Q9Y2G9 1366 aa19.69■□□□□ 0.74
MBD4-201ENST00000249910 MYOM1P52179 1685 aa19.68■□□□□ 0.74
MBD4-201ENST00000249910 TNNT2P45379 298 aaPredicted RBP19.68■□□□□ 0.74
MBD4-201ENST00000249910 SETBP1Q9Y6X0 1596 aa19.68■□□□□ 0.74
MBD4-201ENST00000249910 B4GALNT3Q6L9W6 998 aa19.67■□□□□ 0.74
MBD4-201ENST00000249910 CABP2Q9NPB3 220 aa19.67■□□□□ 0.74
MBD4-201ENST00000249910 KDM5AP29375 1690 aaKnown RBP19.67■□□□□ 0.74
MBD4-201ENST00000249910 ZC3H13Q5T200 1668 aaKnown RBP19.65■□□□□ 0.74
MBD4-201ENST00000249910 WDR43Q15061 677 aaKnown RBP eCLIP19.65■□□□□ 0.74
MBD4-201ENST00000249910 PREX1Q8TCU6 1659 aa19.64■□□□□ 0.73
MBD4-201ENST00000249910 PPP4R2Q9NY27 417 aa19.63■□□□□ 0.73
MBD4-201ENST00000249910 MYO5BQ9ULV0 1848 aa19.63■□□□□ 0.73
MBD4-201ENST00000249910 ESF1Q9H501 851 aaKnown RBP19.62■□□□□ 0.73
MBD4-201ENST00000249910 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
MBD4-201ENST00000249910 PRAM1Q96QH2 718 aa19.62■□□□□ 0.73
MBD4-201ENST00000249910 TMEM131LA2VDJ0 1609 aa19.61■□□□□ 0.73
MBD4-201ENST00000249910 EVC2Q86UK5 1308 aa19.61■□□□□ 0.73
MBD4-201ENST00000249910 MINK1Q8N4C8 1332 aaPredicted RBP19.61■□□□□ 0.73
MBD4-201ENST00000249910 NPC1L1Q9UHC9 1359 aa19.61■□□□□ 0.73
MBD4-201ENST00000249910 NSD3Q9BZ95 1437 aa19.61■□□□□ 0.73
MBD4-201ENST00000249910 PPP6R1Q9UPN7 881 aa19.61■□□□□ 0.73
MBD4-201ENST00000249910 SRPK2P78362 688 aaKnown RBP19.6■□□□□ 0.73
MBD4-201ENST00000249910 MYO3AQ8NEV4 1616 aa19.6■□□□□ 0.73
MBD4-201ENST00000249910 BLMP54132 1417 aaPredicted RBP19.59■□□□□ 0.73
MBD4-201ENST00000249910 KIF13AQ9H1H9 1805 aa19.59■□□□□ 0.73
MBD4-201ENST00000249910 POGKQ9P215 609 aa19.59■□□□□ 0.73
MBD4-201ENST00000249910 ZFYVE9O95405 1425 aa19.59■□□□□ 0.73
MBD4-201ENST00000249910 QRICH2Q9H0J4 1663 aa19.59■□□□□ 0.73
MBD4-201ENST00000249910 ERICH6BQ5W0A0 696 aa19.59■□□□□ 0.73
MBD4-201ENST00000249910 RNF123Q5XPI4 1314 aa19.58■□□□□ 0.73
MBD4-201ENST00000249910 AGLP35573 1532 aa19.58■□□□□ 0.72
MBD4-201ENST00000249910 MORC1Q86VD1 984 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms