RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 NUTM2BA6NNL0 878 aaPredicted RBP19.13■□□□□ 0.65
RFPL3-201ENST00000249007 NUTM2EB1AL46 878 aaPredicted RBP19.13■□□□□ 0.65
RFPL3-201ENST00000249007 NUTM2AQ8IVF1 878 aaPredicted RBP19.13■□□□□ 0.65
RFPL3-201ENST00000249007 KIF15Q9NS87 1388 aa19.12■□□□□ 0.65
RFPL3-201ENST00000249007 AFF2P51816 1311 aa19.12■□□□□ 0.65
RFPL3-201ENST00000249007 ERBINQ96RT1 1412 aa19.12■□□□□ 0.65
RFPL3-201ENST00000249007 KANK1Q14678 1352 aa19.12■□□□□ 0.65
RFPL3-201ENST00000249007 ADGRB3O60242 1522 aa19.12■□□□□ 0.65
RFPL3-201ENST00000249007 CHD2O14647 1828 aaKnown RBP19.11■□□□□ 0.65
RFPL3-201ENST00000249007 NCOA3Q9Y6Q9 1424 aa19.11■□□□□ 0.65
RFPL3-201ENST00000249007 RGS12O14924 1447 aa19.1■□□□□ 0.65
RFPL3-201ENST00000249007 CADPS2Q86UW7 1296 aa19.1■□□□□ 0.65
RFPL3-201ENST00000249007 ATF3P18847 181 aa19.09■□□□□ 0.65
RFPL3-201ENST00000249007 MYOM3Q5VTT5 1437 aa19.07■□□□□ 0.64
RFPL3-201ENST00000249007 NUTM2DQ5VT03 806 aaPredicted RBP19.07■□□□□ 0.64
RFPL3-201ENST00000249007 C19orf44Q9H6X5 657 aa19.07■□□□□ 0.64
RFPL3-201ENST00000249007 RRP7BPQ9NSQ0 103 aa19.07■□□□□ 0.64
RFPL3-201ENST00000249007 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
RFPL3-201ENST00000249007 DIP2AQ14689 1571 aa19.07■□□□□ 0.64
RFPL3-201ENST00000249007 EP400Q96L91 3159 aa19.06■□□□□ 0.64
RFPL3-201ENST00000249007 RBM6P78332 1123 aaKnown RBP19.06■□□□□ 0.64
RFPL3-201ENST00000249007 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.06■□□□□ 0.64
RFPL3-201ENST00000249007 NOS1P29475 1434 aa19.06■□□□□ 0.64
RFPL3-201ENST00000249007 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
RFPL3-201ENST00000249007 SLC52A1Q9NWF4 448 aa19.05■□□□□ 0.64
RFPL3-201ENST00000249007 LMTK2Q8IWU2 1503 aa19.05■□□□□ 0.64
RFPL3-201ENST00000249007 BRINP3Q76B58 766 aa19.04■□□□□ 0.64
RFPL3-201ENST00000249007 QTRT2Q9H974 415 aaKnown RBP19.04■□□□□ 0.64
RFPL3-201ENST00000249007 ZFYVE9O95405 1425 aa19.04■□□□□ 0.64
RFPL3-201ENST00000249007 FOXD1Q16676 465 aa19.03■□□□□ 0.64
RFPL3-201ENST00000249007 ZRANB1Q9UGI0 708 aa19.03■□□□□ 0.64
RFPL3-201ENST00000249007 C8orf37Q96NL8 207 aa19.03■□□□□ 0.64
RFPL3-201ENST00000249007 TBX22Q9Y458 520 aa19.03■□□□□ 0.64
RFPL3-201ENST00000249007 ATAD2Q6PL18 1390 aa19.01■□□□□ 0.63
RFPL3-201ENST00000249007 HDGFP51858 240 aaKnown RBP19.01■□□□□ 0.63
RFPL3-201ENST00000249007 RIMS2Q9UQ26 1411 aa19■□□□□ 0.63
RFPL3-201ENST00000249007 SETD5Q9C0A6 1442 aa19■□□□□ 0.63
RFPL3-201ENST00000249007 CROCC2H7BZ55 1655 aa18.98■□□□□ 0.63
RFPL3-201ENST00000249007 NGLY1Q96IV0 654 aa18.98■□□□□ 0.63
RFPL3-201ENST00000249007 MYO5BQ9ULV0 1848 aa18.97■□□□□ 0.63
RFPL3-201ENST00000249007 ABCC5O15440 1437 aa18.97■□□□□ 0.63
RFPL3-201ENST00000249007 ASXL1Q8IXJ9 1541 aa18.97■□□□□ 0.63
RFPL3-201ENST00000249007 LRRC59Q96AG4 307 aaKnown RBP18.97■□□□□ 0.63
RFPL3-201ENST00000249007 SETBP1Q9Y6X0 1596 aa18.96■□□□□ 0.63
RFPL3-201ENST00000249007 ADAMTS13Q76LX8 1427 aa18.95■□□□□ 0.62
RFPL3-201ENST00000249007 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
RFPL3-201ENST00000249007 DCCP43146 1447 aa18.94■□□□□ 0.62
RFPL3-201ENST00000249007 GCC2Q8IWJ2 1684 aa18.94■□□□□ 0.62
RFPL3-201ENST00000249007 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.93■□□□□ 0.62
RFPL3-201ENST00000249007 NHSL1Q5SYE7 1610 aa18.93■□□□□ 0.62
RFPL3-201ENST00000249007 PNPLA6Q8IY17 1366 aa18.92■□□□□ 0.62
RFPL3-201ENST00000249007 TMEM131LA2VDJ0 1609 aa18.92■□□□□ 0.62
RFPL3-201ENST00000249007 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
RFPL3-201ENST00000249007 KANK4Q5T7N3 995 aaPredicted RBP18.91■□□□□ 0.62
RFPL3-201ENST00000249007 ADAMTS2O95450 1211 aa18.9■□□□□ 0.62
RFPL3-201ENST00000249007 AMOTL2Q9Y2J4 779 aa18.9■□□□□ 0.62
RFPL3-201ENST00000249007 DAPK1P53355 1430 aa18.9■□□□□ 0.62
RFPL3-201ENST00000249007 ANKRD30AQ9BXX3 1397 aa18.9■□□□□ 0.62
RFPL3-201ENST00000249007 MST1RQ04912 1400 aa18.89■□□□□ 0.62
RFPL3-201ENST00000249007 CHGAP10645 457 aaKnown RBP18.88■□□□□ 0.61
RFPL3-201ENST00000249007 TRPM2O94759 1503 aa18.88■□□□□ 0.61
RFPL3-201ENST00000249007 DDX17Q92841 729 aaKnown RBP18.87■□□□□ 0.61
RFPL3-201ENST00000249007 CHIC2Q9UKJ5 165 aa18.87■□□□□ 0.61
RFPL3-201ENST00000249007 PTPRUQ92729 1446 aa18.86■□□□□ 0.61
RFPL3-201ENST00000249007 PTPN23Q9H3S7 1636 aa18.86■□□□□ 0.61
RFPL3-201ENST00000249007 CCDC125Q86Z20 511 aa18.86■□□□□ 0.61
RFPL3-201ENST00000249007 USP21Q9UK80 565 aa18.86■□□□□ 0.61
RFPL3-201ENST00000249007 TRPC5Q9UL62 973 aaPredicted RBP18.86■□□□□ 0.61
RFPL3-201ENST00000249007 VPS8Q8N3P4 1428 aa18.85■□□□□ 0.61
RFPL3-201ENST00000249007 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
RFPL3-201ENST00000249007 FNBP4Q8N3X1 1017 aaPredicted RBP18.8■□□□□ 0.6
RFPL3-201ENST00000249007 ATRNO75882 1429 aa18.79■□□□□ 0.6
RFPL3-201ENST00000249007 UNC13BO14795 1591 aa18.79■□□□□ 0.6
RFPL3-201ENST00000249007 PTCH1Q13635 1447 aa18.77■□□□□ 0.6
RFPL3-201ENST00000249007 ADGRL3Q9HAR2 1447 aa18.77■□□□□ 0.6
RFPL3-201ENST00000249007 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
RFPL3-201ENST00000249007 LRP5O75197 1615 aa18.73■□□□□ 0.59
RFPL3-201ENST00000249007 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
RFPL3-201ENST00000249007 LAMC1P11047 1609 aa18.73■□□□□ 0.59
RFPL3-201ENST00000249007 NRXN3Q9Y4C0 1643 aa18.73■□□□□ 0.59
RFPL3-201ENST00000249007 C1orf167Q5SNV9 1468 aa18.72■□□□□ 0.59
RFPL3-201ENST00000249007 BLMP54132 1417 aaPredicted RBP18.72■□□□□ 0.59
RFPL3-201ENST00000249007 SOS2Q07890 1332 aaPredicted RBP18.72■□□□□ 0.59
RFPL3-201ENST00000249007 NALCNQ8IZF0 1738 aa18.72■□□□□ 0.59
RFPL3-201ENST00000249007 METP08581 1390 aa18.71■□□□□ 0.59
RFPL3-201ENST00000249007 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
RFPL3-201ENST00000249007 E9PCH4 1651 aa18.69■□□□□ 0.58
RFPL3-201ENST00000249007 DEFB132Q7Z7B7 95 aa18.69■□□□□ 0.58
RFPL3-201ENST00000249007 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
RFPL3-201ENST00000249007 COL22A1Q8NFW1 1626 aaPredicted RBP18.67■□□□□ 0.58
RFPL3-201ENST00000249007 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
RFPL3-201ENST00000249007 MYOM2P54296 1465 aa18.66■□□□□ 0.58
RFPL3-201ENST00000249007 SF3B2Q13435 895 aaKnown RBP18.65■□□□□ 0.58
RFPL3-201ENST00000249007 IQGAP3Q86VI3 1631 aa18.63■□□□□ 0.57
RFPL3-201ENST00000249007 MARF1Q9Y4F3 1742 aaKnown RBP18.61■□□□□ 0.57
RFPL3-201ENST00000249007 APLP2Q06481 763 aa18.61■□□□□ 0.57
RFPL3-201ENST00000249007 ZNF326Q5BKZ1 582 aaKnown RBP18.61■□□□□ 0.57
RFPL3-201ENST00000249007 RALGAPBQ86X10 1494 aa18.61■□□□□ 0.57
RFPL3-201ENST00000249007 PSDA5PKW4 1024 aaPredicted RBP18.59■□□□□ 0.57
RFPL3-201ENST00000249007 GLI3P10071 1580 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms