RNA–Protein interactions for RNA: ENST00000248437.8

TUBA4A-201, Transcript of tubulin alpha 4a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA4A, Length 2,162 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA4A-201ENST00000248437 SCAF11Q99590 1463 aaKnown RBP25.41■■□□□ 1.66
TUBA4A-201ENST00000248437 SUPT16HQ9Y5B9 1047 aaKnown RBP25.41■■□□□ 1.66
TUBA4A-201ENST00000248437 DISP3Q9P2K9 1392 aa25.39■■□□□ 1.66
TUBA4A-201ENST00000248437 CFAP65Q6ZU64 1925 aaKnown RBP25.38■■□□□ 1.65
TUBA4A-201ENST00000248437 TMF1P82094 1093 aa25.38■■□□□ 1.65
TUBA4A-201ENST00000248437 NRXN1Q9ULB1 1477 aa25.38■■□□□ 1.65
TUBA4A-201ENST00000248437 AGLP35573 1532 aa25.37■■□□□ 1.65
TUBA4A-201ENST00000248437 PPLO60437 1756 aa25.35■■□□□ 1.65
TUBA4A-201ENST00000248437 RALBP1Q15311 655 aa25.35■■□□□ 1.65
TUBA4A-201ENST00000248437 MLECQ14165 292 aa25.34■■□□□ 1.65
TUBA4A-201ENST00000248437 FAM9BQ8IZU0 186 aa25.34■■□□□ 1.65
TUBA4A-201ENST00000248437 PIK3C2BO00750 1634 aa25.33■■□□□ 1.65
TUBA4A-201ENST00000248437 NOS1P29475 1434 aa25.33■■□□□ 1.65
TUBA4A-201ENST00000248437 ARHGAP31Q2M1Z3 1444 aa25.33■■□□□ 1.65
TUBA4A-201ENST00000248437 EIF3AQ14152 1382 aaKnown RBP25.33■■□□□ 1.65
TUBA4A-201ENST00000248437 ZBED9Q6R2W3 1325 aa25.29■■□□□ 1.64
TUBA4A-201ENST00000248437 MYBBP1AQ9BQG0 1328 aaKnown RBP25.29■■□□□ 1.64
TUBA4A-201ENST00000248437 SETBP1Q9Y6X0 1596 aa25.29■■□□□ 1.64
TUBA4A-201ENST00000248437 PER1O15534 1290 aaPredicted RBP25.29■■□□□ 1.64
TUBA4A-201ENST00000248437 BRD4O60885 1362 aaPredicted RBP25.28■■□□□ 1.64
TUBA4A-201ENST00000248437 ADGRF5Q8IZF2 1346 aa25.28■■□□□ 1.64
TUBA4A-201ENST00000248437 PARD3Q8TEW0 1356 aa25.28■■□□□ 1.64
TUBA4A-201ENST00000248437 SYNMO15061 1565 aa25.27■■□□□ 1.64
TUBA4A-201ENST00000248437 MYO3AQ8NEV4 1616 aa25.26■■□□□ 1.63
TUBA4A-201ENST00000248437 RPGRIP1LQ68CZ1 1315 aa25.26■■□□□ 1.63
TUBA4A-201ENST00000248437 CDCA8Q53HL2 280 aa25.26■■□□□ 1.63
TUBA4A-201ENST00000248437 SLC24A1O60721 1099 aa25.25■■□□□ 1.63
TUBA4A-201ENST00000248437 KDM5AP29375 1690 aaKnown RBP25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 CLTCQ00610 1675 aaKnown RBP25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 NEFLP07196 543 aa25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 CNGB1Q14028 1251 aaPredicted RBP25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 CFAP70Q5T0N1 1121 aa25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 TMC1Q8TDI8 760 aa25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 PIK3C2GO75747 1445 aa25.22■■□□□ 1.63
TUBA4A-201ENST00000248437 PNISRQ8TF01 805 aaKnown RBP25.21■■□□□ 1.63
TUBA4A-201ENST00000248437 PREX1Q8TCU6 1659 aa25.21■■□□□ 1.63
TUBA4A-201ENST00000248437 MYOM1P52179 1685 aa25.2■■□□□ 1.63
TUBA4A-201ENST00000248437 PANK3Q9H999 370 aa25.2■■□□□ 1.62
TUBA4A-201ENST00000248437 CHGAP10645 457 aaKnown RBP25.19■■□□□ 1.62
TUBA4A-201ENST00000248437 FKBP8Q14318 412 aa25.18■■□□□ 1.62
TUBA4A-201ENST00000248437 FBXO31Q5XUX0 539 aaPredicted RBP25.18■■□□□ 1.62
TUBA4A-201ENST00000248437 LRPPRCP42704 1394 aaKnown RBP25.18■■□□□ 1.62
TUBA4A-201ENST00000248437 PPP6R1Q9UPN7 881 aa25.18■■□□□ 1.62
TUBA4A-201ENST00000248437 NLRP13Q86W25 1043 aa25.17■■□□□ 1.62
TUBA4A-201ENST00000248437 SBNO2Q9Y2G9 1366 aa25.17■■□□□ 1.62
TUBA4A-201ENST00000248437 NEXMIFQ5QGS0 1516 aa25.16■■□□□ 1.62
TUBA4A-201ENST00000248437 ADGRB1O14514 1584 aa25.15■■□□□ 1.62
TUBA4A-201ENST00000248437 C14orf93Q9H972 538 aaKnown RBP25.14■■□□□ 1.61
TUBA4A-201ENST00000248437 SLC52A1Q9NWF4 448 aa25.14■■□□□ 1.61
TUBA4A-201ENST00000248437 ERVK-7P63135 1459 aa25.12■■□□□ 1.61
TUBA4A-201ENST00000248437 IDI1Q13907 227 aa25.1■■□□□ 1.61
TUBA4A-201ENST00000248437 MYO5BQ9ULV0 1848 aa25.1■■□□□ 1.61
TUBA4A-201ENST00000248437 ZFYVE9O95405 1425 aa25.1■■□□□ 1.61
TUBA4A-201ENST00000248437 PELP1Q8IZL8 1130 aaKnown RBP25.1■■□□□ 1.61
TUBA4A-201ENST00000248437 TMEM131LA2VDJ0 1609 aa25.09■■□□□ 1.61
TUBA4A-201ENST00000248437 ESF1Q9H501 851 aaKnown RBP25.09■■□□□ 1.61
TUBA4A-201ENST00000248437 QRICH2Q9H0J4 1663 aa25.08■■□□□ 1.61
TUBA4A-201ENST00000248437 ZMYM3Q14202 1370 aa25.08■■□□□ 1.61
TUBA4A-201ENST00000248437 VGFO15240 615 aaPredicted RBP25.08■■□□□ 1.61
TUBA4A-201ENST00000248437 CC2D1BQ5T0F9 858 aaKnown RBP25.07■■□□□ 1.6
TUBA4A-201ENST00000248437 ASXL1Q8IXJ9 1541 aa25.06■■□□□ 1.6
TUBA4A-201ENST00000248437 KNSTRNQ9Y448 316 aa25.05■■□□□ 1.6
TUBA4A-201ENST00000248437 INSRP06213 1382 aa25.05■■□□□ 1.6
TUBA4A-201ENST00000248437 NPC1L1Q9UHC9 1359 aa25.05■■□□□ 1.6
TUBA4A-201ENST00000248437 CENPJQ9HC77 1338 aaPredicted RBP25.05■■□□□ 1.6
TUBA4A-201ENST00000248437 SMG6Q86US8 1419 aaKnown RBP25.04■■□□□ 1.6
TUBA4A-201ENST00000248437 SPATA31D1Q6ZQQ2 1576 aa25.04■■□□□ 1.6
TUBA4A-201ENST00000248437 ARHGEF28Q8N1W1 1705 aaKnown RBP25.02■■□□□ 1.6
TUBA4A-201ENST00000248437 AMER1Q5JTC6 1135 aaPredicted RBP25.01■■□□□ 1.59
TUBA4A-201ENST00000248437 NUTM2DQ5VT03 806 aaPredicted RBP24.98■■□□□ 1.59
TUBA4A-201ENST00000248437 CEBPAP49715 358 aaPredicted RBP24.97■■□□□ 1.59
TUBA4A-201ENST00000248437 ERICH6BQ5W0A0 696 aa24.97■■□□□ 1.59
TUBA4A-201ENST00000248437 BCANQ96GW7 911 aa24.97■■□□□ 1.59
TUBA4A-201ENST00000248437 TRAK1Q9UPV9 953 aa24.97■■□□□ 1.59
TUBA4A-201ENST00000248437 FER1L4A9Z1Z3 1794 aa24.96■■□□□ 1.59
TUBA4A-201ENST00000248437 NUDCQ9Y266 331 aa24.95■■□□□ 1.58
TUBA4A-201ENST00000248437 TMEM132EQ6IEE7 984 aa24.94■■□□□ 1.58
TUBA4A-201ENST00000248437 BLMP54132 1417 aaPredicted RBP24.93■■□□□ 1.58
TUBA4A-201ENST00000248437 PLPPR3Q6T4P5 718 aa24.93■■□□□ 1.58
TUBA4A-201ENST00000248437 PPP2R1AP30153 589 aa24.91■■□□□ 1.58
TUBA4A-201ENST00000248437 PUS7Q96PZ0 661 aaKnown RBP24.91■■□□□ 1.58
TUBA4A-201ENST00000248437 C3P01024 1663 aa24.9■■□□□ 1.58
TUBA4A-201ENST00000248437 STAG3Q9UJ98 1225 aa24.9■■□□□ 1.58
TUBA4A-201ENST00000248437 TNRQ92752 1358 aa24.9■■□□□ 1.58
TUBA4A-201ENST00000248437 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
TUBA4A-201ENST00000248437 A2ML1A8K2U0 1454 aa24.87■■□□□ 1.57
TUBA4A-201ENST00000248437 USP32Q8NFA0 1604 aa24.86■■□□□ 1.57
TUBA4A-201ENST00000248437 TULP4Q9NRJ4 1543 aa24.85■■□□□ 1.57
TUBA4A-201ENST00000248437 CARD14Q9BXL6 1004 aa24.84■■□□□ 1.57
TUBA4A-201ENST00000248437 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
TUBA4A-201ENST00000248437 ALKQ9UM73 1620 aa24.83■■□□□ 1.57
TUBA4A-201ENST00000248437 EVC2Q86UK5 1308 aa24.83■■□□□ 1.57
TUBA4A-201ENST00000248437 RNF123Q5XPI4 1314 aa24.82■■□□□ 1.56
TUBA4A-201ENST00000248437 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
TUBA4A-201ENST00000248437 PTPRMP28827 1452 aa24.81■■□□□ 1.56
TUBA4A-201ENST00000248437 IRX6P78412 446 aaPredicted RBP24.81■■□□□ 1.56
TUBA4A-201ENST00000248437 YTHDC2Q9H6S0 1430 aaKnown RBP24.79■■□□□ 1.56
TUBA4A-201ENST00000248437 ADAMTSL3P82987 1691 aa24.79■■□□□ 1.56
TUBA4A-201ENST00000248437 NSD3Q9BZ95 1437 aa24.78■■□□□ 1.56
TUBA4A-201ENST00000248437 SETD1AO15047 1707 aaKnown RBP24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms