RNA–Protein interactions for RNA: ENST00000247182.6

SIX1-201, Transcript of SIX homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX1, Length 3,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-201ENST00000247182 PANK1Q8TE04 598 aa12.56□□□□□ -0.4
SIX1-201ENST00000247182 KIF3BO15066 747 aa12.56□□□□□ -0.4
SIX1-201ENST00000247182 DISP3Q9P2K9 1392 aa12.56□□□□□ -0.4
SIX1-201ENST00000247182 CHMP5Q9NZZ3 219 aa12.55□□□□□ -0.4
SIX1-201ENST00000247182 TRAK1Q9UPV9 953 aa12.55□□□□□ -0.4
SIX1-201ENST00000247182 TCOF1Q13428 1488 aaKnown RBP12.55□□□□□ -0.4
SIX1-201ENST00000247182 MCM4P33991 863 aa12.55□□□□□ -0.4
SIX1-201ENST00000247182 PPP2R1AP30153 589 aa12.55□□□□□ -0.4
SIX1-201ENST00000247182 GPATCH8Q9UKJ3 1502 aaKnown RBP12.55□□□□□ -0.4
SIX1-201ENST00000247182 PTPRGP23470 1445 aa12.54□□□□□ -0.4
SIX1-201ENST00000247182 FTSJ3Q8IY81 847 aaKnown RBP12.54□□□□□ -0.4
SIX1-201ENST00000247182 NASPP49321 788 aaPredicted RBP12.54□□□□□ -0.4
SIX1-201ENST00000247182 MPNDQ8N594 471 aa12.54□□□□□ -0.4
SIX1-201ENST00000247182 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
SIX1-201ENST00000247182 U2SURPO15042 1029 aaKnown RBP12.53□□□□□ -0.4
SIX1-201ENST00000247182 CALD1Q05682 793 aaKnown RBP12.53□□□□□ -0.4
SIX1-201ENST00000247182 GGT6Q6P531 493 aa12.53□□□□□ -0.4
SIX1-201ENST00000247182 ZNF771Q7L3S4 317 aaPredicted RBP12.53□□□□□ -0.4
SIX1-201ENST00000247182 UQCRHLA0A096LP55 91 aa12.52□□□□□ -0.4
SIX1-201ENST00000247182 UQCRHP07919 91 aa12.52□□□□□ -0.4
SIX1-201ENST00000247182 STK26Q9P289 416 aa12.52□□□□□ -0.4
SIX1-201ENST00000247182 FOXD4L5Q5VV16 416 aaPredicted RBP12.52□□□□□ -0.41
SIX1-201ENST00000247182 FOXD4L4Q8WXT5 416 aaPredicted RBP12.52□□□□□ -0.41
SIX1-201ENST00000247182 SAMD9Q5K651 1589 aa12.52□□□□□ -0.41
SIX1-201ENST00000247182 MORC1Q86VD1 984 aa12.52□□□□□ -0.41
SIX1-201ENST00000247182 BCL11BQ9C0K0 894 aaPredicted RBP12.52□□□□□ -0.41
SIX1-201ENST00000247182 KIAA0586Q9BVV6 1533 aa12.51□□□□□ -0.41
SIX1-201ENST00000247182 MAP7D2Q96T17 732 aa12.51□□□□□ -0.41
SIX1-201ENST00000247182 LRRIQ1Q96JM4 1722 aa12.5□□□□□ -0.41
SIX1-201ENST00000247182 PER1O15534 1290 aaPredicted RBP12.5□□□□□ -0.41
SIX1-201ENST00000247182 TMEM132EQ6IEE7 984 aa12.5□□□□□ -0.41
SIX1-201ENST00000247182 SPINK5Q9NQ38 1064 aaPredicted RBP12.5□□□□□ -0.41
SIX1-201ENST00000247182 WDR62O43379 1518 aa12.5□□□□□ -0.41
SIX1-201ENST00000247182 KIAA2012Q0VF49 1180 aa12.5□□□□□ -0.41
SIX1-201ENST00000247182 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
SIX1-201ENST00000247182 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
SIX1-201ENST00000247182 CBX1P83916 185 aa12.48□□□□□ -0.41
SIX1-201ENST00000247182 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
SIX1-201ENST00000247182 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
SIX1-201ENST00000247182 CDCA8Q53HL2 280 aa12.48□□□□□ -0.41
SIX1-201ENST00000247182 TESK2Q96S53 571 aa12.48□□□□□ -0.41
SIX1-201ENST00000247182 EFCAB2Q5VUJ9 269 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 PLCD3Q8N3E9 789 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 MRC2Q9UBG0 1479 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 SPAG9O60271 1321 aaKnown RBP12.47□□□□□ -0.41
SIX1-201ENST00000247182 RNF214Q8ND24 703 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 RNF123Q5XPI4 1314 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 DISP1Q96F81 1524 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 MAPK8IP3Q9UPT6 1336 aa12.47□□□□□ -0.41
SIX1-201ENST00000247182 TNNT3P45378 269 aaPredicted RBP12.46□□□□□ -0.41
SIX1-201ENST00000247182 DMRT2Q9Y5R5 561 aa12.46□□□□□ -0.41
SIX1-201ENST00000247182 FOXD4L6Q3SYB3 417 aaPredicted RBP12.46□□□□□ -0.41
SIX1-201ENST00000247182 FOXD4L3Q6VB84 417 aaPredicted RBP12.46□□□□□ -0.41
SIX1-201ENST00000247182 TNNQ9UQP3 1299 aa12.46□□□□□ -0.41
SIX1-201ENST00000247182 ABCA5Q8WWZ7 1642 aa12.46□□□□□ -0.41
SIX1-201ENST00000247182 DUSP27Q5VZP5 1158 aa12.46□□□□□ -0.42
SIX1-201ENST00000247182 GRIN2AQ12879 1464 aa12.46□□□□□ -0.42
SIX1-201ENST00000247182 C22orf23Q9BZE7 217 aa12.45□□□□□ -0.42
SIX1-201ENST00000247182 ERBINQ96RT1 1412 aa12.45□□□□□ -0.42
SIX1-201ENST00000247182 SLC12A5Q9H2X9 1139 aa12.45□□□□□ -0.42
SIX1-201ENST00000247182 CENPJQ9HC77 1338 aaPredicted RBP12.45□□□□□ -0.42
SIX1-201ENST00000247182 ZSCAN30Q86W11 494 aa12.45□□□□□ -0.42
SIX1-201ENST00000247182 KIF21AQ7Z4S6 1674 aa12.45□□□□□ -0.42
SIX1-201ENST00000247182 TBC1D2Q9BYX2 928 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 RWDD1Q9H446 243 aaPredicted RBP12.44□□□□□ -0.42
SIX1-201ENST00000247182 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 PLEKHH1Q9ULM0 1364 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 IGSF3O75054 1194 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 AAMPQ13685 434 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 C8orf34Q49A92 452 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 PLPPR3Q6T4P5 718 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 IGHDP01880 384 aa12.44□□□□□ -0.42
SIX1-201ENST00000247182 SKOR2Q2VWA4 1001 aaPredicted RBP12.43□□□□□ -0.42
SIX1-201ENST00000247182 PLEKHH2Q8IVE3 1493 aa12.43□□□□□ -0.42
SIX1-201ENST00000247182 CHMP4BQ9H444 224 aaKnown RBP12.43□□□□□ -0.42
SIX1-201ENST00000247182 KIF14Q15058 1648 aa12.43□□□□□ -0.42
SIX1-201ENST00000247182 MAGI1Q96QZ7 1491 aaPredicted RBP12.43□□□□□ -0.42
SIX1-201ENST00000247182 LRPPRCP42704 1394 aaKnown RBP12.42□□□□□ -0.42
SIX1-201ENST00000247182 CCDC173Q0VFZ6 552 aa12.42□□□□□ -0.42
SIX1-201ENST00000247182 CAVIN1Q6NZI2 390 aaKnown RBP12.42□□□□□ -0.42
SIX1-201ENST00000247182 VGLL3A8MV65 326 aa12.42□□□□□ -0.42
SIX1-201ENST00000247182 FGD1P98174 961 aa12.42□□□□□ -0.42
SIX1-201ENST00000247182 ELL2O00472 640 aaPredicted RBP12.42□□□□□ -0.42
SIX1-201ENST00000247182 SEC24BO95487 1268 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 MTERF4Q7Z6M4 381 aaKnown RBP12.41□□□□□ -0.42
SIX1-201ENST00000247182 PMFBP1Q8TBY8 1022 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 ATP10BO94823 1461 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 MCTP1Q6DN14 999 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 CGNQ9P2M7 1197 aaKnown RBP12.41□□□□□ -0.42
SIX1-201ENST00000247182 GCC2Q8IWJ2 1684 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 IFT140Q96RY7 1462 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
SIX1-201ENST00000247182 RALGAPBQ86X10 1494 aa12.4□□□□□ -0.42
SIX1-201ENST00000247182 SRPK2P78362 688 aaKnown RBP12.4□□□□□ -0.42
SIX1-201ENST00000247182 ARHGAP5Q13017 1502 aa12.4□□□□□ -0.42
SIX1-201ENST00000247182 DNMT1P26358 1616 aaKnown RBP12.4□□□□□ -0.42
SIX1-201ENST00000247182 SLFN5Q08AF3 891 aa12.4□□□□□ -0.42
SIX1-201ENST00000247182 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
SIX1-201ENST00000247182 TSR2Q969E8 191 aaKnown RBP12.4□□□□□ -0.42
SIX1-201ENST00000247182 RAPGEF6Q8TEU7 1601 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms