RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 CHMP4BQ9H444 224 aaKnown RBP11.62□□□□□ -0.55
COL21A1-201ENST00000244728 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
COL21A1-201ENST00000244728 HSP90AA2PQ14568 343 aaPredicted RBP11.62□□□□□ -0.55
COL21A1-201ENST00000244728 DNTTIP2Q5QJE6 756 aaKnown RBP11.62□□□□□ -0.55
COL21A1-201ENST00000244728 NAP1L2Q9ULW6 460 aaPredicted RBP11.61□□□□□ -0.55
COL21A1-201ENST00000244728 CDK13Q14004 1512 aaKnown RBP11.61□□□□□ -0.55
COL21A1-201ENST00000244728 SNAPC4Q5SXM2 1469 aa11.61□□□□□ -0.55
COL21A1-201ENST00000244728 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
COL21A1-201ENST00000244728 SLC12A5Q9H2X9 1139 aa11.6□□□□□ -0.55
COL21A1-201ENST00000244728 BCAR3O75815 825 aa11.6□□□□□ -0.55
COL21A1-201ENST00000244728 FGD1P98174 961 aa11.6□□□□□ -0.55
COL21A1-201ENST00000244728 HMOX1P09601 288 aa11.59□□□□□ -0.55
COL21A1-201ENST00000244728 PLCB2Q00722 1185 aa11.59□□□□□ -0.55
COL21A1-201ENST00000244728 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
COL21A1-201ENST00000244728 MRC2Q9UBG0 1479 aa11.59□□□□□ -0.55
COL21A1-201ENST00000244728 SCAPERQ9BY12 1400 aa11.59□□□□□ -0.55
COL21A1-201ENST00000244728 FAM43AQ8N2R8 423 aa11.59□□□□□ -0.55
COL21A1-201ENST00000244728 NPHP1O15259 732 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 NECTIN2Q92692 538 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 EPRSP07814 1512 aaKnown RBP11.58□□□□□ -0.56
COL21A1-201ENST00000244728 NUTM2GQ5VZR2 741 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 COG3Q96JB2 828 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 ROCK1Q13464 1354 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 MTHFSP49914 203 aa11.58□□□□□ -0.56
COL21A1-201ENST00000244728 ARHGAP5Q13017 1502 aa11.57□□□□□ -0.56
COL21A1-201ENST00000244728 DDX11L8A8MPP1 907 aa11.57□□□□□ -0.56
COL21A1-201ENST00000244728 CALD1Q05682 793 aaKnown RBP11.57□□□□□ -0.56
COL21A1-201ENST00000244728 ABCA10Q8WWZ4 1543 aa11.57□□□□□ -0.56
COL21A1-201ENST00000244728 TROQ12816 1431 aaPredicted RBP11.57□□□□□ -0.56
COL21A1-201ENST00000244728 ARID3AQ99856 593 aa11.57□□□□□ -0.56
COL21A1-201ENST00000244728 CHMP5Q9NZZ3 219 aa11.57□□□□□ -0.56
COL21A1-201ENST00000244728 RIPK4P57078 832 aa11.56□□□□□ -0.56
COL21A1-201ENST00000244728 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
COL21A1-201ENST00000244728 ABCC5O15440 1437 aa11.56□□□□□ -0.56
COL21A1-201ENST00000244728 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
COL21A1-201ENST00000244728 SYNJ2O15056 1496 aa11.56□□□□□ -0.56
COL21A1-201ENST00000244728 CFAP43Q8NDM7 1665 aa11.56□□□□□ -0.56
COL21A1-201ENST00000244728 PLB1Q6P1J6 1458 aa11.55□□□□□ -0.56
COL21A1-201ENST00000244728 DIAPH1O60610 1272 aaKnown RBP11.55□□□□□ -0.56
COL21A1-201ENST00000244728 ZKSCAN2Q63HK3 967 aa11.55□□□□□ -0.56
COL21A1-201ENST00000244728 IFT140Q96RY7 1462 aa11.54□□□□□ -0.56
COL21A1-201ENST00000244728 NOL8Q76FK4 1167 aaKnown RBP11.54□□□□□ -0.56
COL21A1-201ENST00000244728 C22orf23Q9BZE7 217 aa11.54□□□□□ -0.56
COL21A1-201ENST00000244728 DNMBPQ6XZF7 1577 aa11.53□□□□□ -0.56
COL21A1-201ENST00000244728 PTMSP20962 102 aa11.53□□□□□ -0.56
COL21A1-201ENST00000244728 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
COL21A1-201ENST00000244728 DHX29Q7Z478 1369 aaKnown RBP11.52□□□□□ -0.56
COL21A1-201ENST00000244728 ANKRD45Q5TZF3 282 aa11.52□□□□□ -0.56
COL21A1-201ENST00000244728 CHMP3Q9Y3E7 222 aa11.52□□□□□ -0.56
COL21A1-201ENST00000244728 TCP11L2Q8N4U5 519 aa11.52□□□□□ -0.57
COL21A1-201ENST00000244728 PDZRN3Q9UPQ7 1066 aa11.52□□□□□ -0.57
COL21A1-201ENST00000244728 TRAK2O60296 914 aa11.52□□□□□ -0.57
COL21A1-201ENST00000244728 RNF123Q5XPI4 1314 aa11.52□□□□□ -0.57
COL21A1-201ENST00000244728 ZNF608Q9ULD9 1512 aaPredicted RBP11.52□□□□□ -0.57
COL21A1-201ENST00000244728 NGEFQ8N5V2 710 aa11.51□□□□□ -0.57
COL21A1-201ENST00000244728 EIF2S2P20042 333 aaKnown RBP11.51□□□□□ -0.57
COL21A1-201ENST00000244728 PDE3AQ14432 1141 aa11.51□□□□□ -0.57
COL21A1-201ENST00000244728 PRAM1Q96QH2 718 aa11.51□□□□□ -0.57
COL21A1-201ENST00000244728 DDX49Q9Y6V7 483 aaKnown RBP11.51□□□□□ -0.57
COL21A1-201ENST00000244728 DZIP1LQ8IYY4 767 aaKnown RBP11.51□□□□□ -0.57
COL21A1-201ENST00000244728 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
COL21A1-201ENST00000244728 CCDC9Q9Y3X0 531 aaKnown RBP11.51□□□□□ -0.57
COL21A1-201ENST00000244728 SLFN5Q08AF3 891 aa11.5□□□□□ -0.57
COL21A1-201ENST00000244728 ARHGEF11O15085 1522 aa11.5□□□□□ -0.57
COL21A1-201ENST00000244728 CUL7Q14999 1698 aa11.5□□□□□ -0.57
COL21A1-201ENST00000244728 MRE11P49959 708 aa11.5□□□□□ -0.57
COL21A1-201ENST00000244728 KIAA0586Q9BVV6 1533 aa11.5□□□□□ -0.57
COL21A1-201ENST00000244728 UGGT2Q9NYU1 1516 aa11.5□□□□□ -0.57
COL21A1-201ENST00000244728 ERBINQ96RT1 1412 aa11.49□□□□□ -0.57
COL21A1-201ENST00000244728 RUNDC1Q96C34 613 aa11.49□□□□□ -0.57
COL21A1-201ENST00000244728 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
COL21A1-201ENST00000244728 DUSP27Q5VZP5 1158 aa11.49□□□□□ -0.57
COL21A1-201ENST00000244728 URB2Q14146 1524 aaKnown RBP11.48□□□□□ -0.57
COL21A1-201ENST00000244728 KIAA1211Q6ZU35 1233 aa11.48□□□□□ -0.57
COL21A1-201ENST00000244728 SLC26A8Q96RN1 970 aa11.48□□□□□ -0.57
COL21A1-201ENST00000244728 LNPKQ9C0E8 428 aa11.48□□□□□ -0.57
COL21A1-201ENST00000244728 SKOR2Q2VWA4 1001 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-201ENST00000244728 FOXD4L5Q5VV16 416 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-201ENST00000244728 FOXD4L4Q8WXT5 416 aaPredicted RBP11.48□□□□□ -0.57
COL21A1-201ENST00000244728 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
COL21A1-201ENST00000244728 DDX19BQ9UMR2 479 aa11.47□□□□□ -0.57
COL21A1-201ENST00000244728 TULP1O00294 542 aaPredicted RBP11.46□□□□□ -0.57
COL21A1-201ENST00000244728 MCM4P33991 863 aa11.46□□□□□ -0.57
COL21A1-201ENST00000244728 PSME1Q06323 249 aa11.46□□□□□ -0.57
COL21A1-201ENST00000244728 TEFQ10587 303 aa11.46□□□□□ -0.57
COL21A1-201ENST00000244728 ZRSR1Q15695 479 aaKnown RBP11.46□□□□□ -0.57
COL21A1-201ENST00000244728 TSR2Q969E8 191 aaKnown RBP11.46□□□□□ -0.57
COL21A1-201ENST00000244728 MCCP23508 829 aa11.46□□□□□ -0.58
COL21A1-201ENST00000244728 NLRP6P59044 892 aa11.46□□□□□ -0.58
COL21A1-201ENST00000244728 HMMRO75330 724 aa11.46□□□□□ -0.58
COL21A1-201ENST00000244728 C8orf34Q49A92 452 aa11.46□□□□□ -0.58
COL21A1-201ENST00000244728 CAMSAP2Q08AD1 1489 aa11.45□□□□□ -0.58
COL21A1-201ENST00000244728 AAMPQ13685 434 aa11.45□□□□□ -0.58
COL21A1-201ENST00000244728 RILPL2Q969X0 211 aa11.45□□□□□ -0.58
COL21A1-201ENST00000244728 FOXD4L6Q3SYB3 417 aaPredicted RBP11.44□□□□□ -0.58
COL21A1-201ENST00000244728 FOXD4L3Q6VB84 417 aaPredicted RBP11.44□□□□□ -0.58
COL21A1-201ENST00000244728 ZNF428Q96B54 188 aa11.44□□□□□ -0.58
COL21A1-201ENST00000244728 STAC3Q96MF2 364 aa11.44□□□□□ -0.58
COL21A1-201ENST00000244728 THOC2Q8NI27 1593 aaKnown RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms