RNA–Protein interactions for RNA: ENST00000243498.9

EXOSC9-201, Transcript of exosome component 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC9, Length 1,481 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC9-201ENST00000243498 LMTK2Q8IWU2 1503 aa13.12□□□□□ -0.31
EXOSC9-201ENST00000243498 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
EXOSC9-201ENST00000243498 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
EXOSC9-201ENST00000243498 ESF1Q9H501 851 aaKnown RBP13.1□□□□□ -0.31
EXOSC9-201ENST00000243498 RPRD2Q5VT52 1461 aaKnown RBP13.09□□□□□ -0.31
EXOSC9-201ENST00000243498 CEP152O94986 1710 aa13.08□□□□□ -0.31
EXOSC9-201ENST00000243498 E9PCH4 1651 aa13.08□□□□□ -0.32
EXOSC9-201ENST00000243498 CCDC144AA2RUR9 1427 aa13.08□□□□□ -0.32
EXOSC9-201ENST00000243498 ARID4BQ4LE39 1312 aaPredicted RBP13.08□□□□□ -0.32
EXOSC9-201ENST00000243498 EFCAB6Q5THR3 1501 aa13.07□□□□□ -0.32
EXOSC9-201ENST00000243498 SPHKAPQ2M3C7 1700 aa13.06□□□□□ -0.32
EXOSC9-201ENST00000243498 ABCC3O15438 1527 aa13.05□□□□□ -0.32
EXOSC9-201ENST00000243498 CAMSAP1Q5T5Y3 1602 aa13.05□□□□□ -0.32
EXOSC9-201ENST00000243498 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
EXOSC9-201ENST00000243498 ARHGAP31Q2M1Z3 1444 aa13.04□□□□□ -0.32
EXOSC9-201ENST00000243498 PTPRTO14522 1441 aa13.02□□□□□ -0.32
EXOSC9-201ENST00000243498 TRPM2O94759 1503 aa13.02□□□□□ -0.32
EXOSC9-201ENST00000243498 PPP1R15AO75807 674 aaPredicted RBP13.02□□□□□ -0.33
EXOSC9-201ENST00000243498 MLECQ14165 292 aa13.02□□□□□ -0.33
EXOSC9-201ENST00000243498 CNTLNQ9NXG0 1405 aa13.02□□□□□ -0.33
EXOSC9-201ENST00000243498 DCBLD2Q96PD2 775 aa13.01□□□□□ -0.33
EXOSC9-201ENST00000243498 CFAP65Q6ZU64 1925 aaKnown RBP13□□□□□ -0.33
EXOSC9-201ENST00000243498 STAC3Q96MF2 364 aa13□□□□□ -0.33
EXOSC9-201ENST00000243498 KIF1BO60333 1816 aa13□□□□□ -0.33
EXOSC9-201ENST00000243498 CLTCQ00610 1675 aaKnown RBP13□□□□□ -0.33
EXOSC9-201ENST00000243498 NPATQ14207 1427 aa12.99□□□□□ -0.33
EXOSC9-201ENST00000243498 FKBP8Q14318 412 aa12.99□□□□□ -0.33
EXOSC9-201ENST00000243498 PLA2R1Q13018 1463 aa12.99□□□□□ -0.33
EXOSC9-201ENST00000243498 L3MBTL2Q969R5 705 aa12.98□□□□□ -0.33
EXOSC9-201ENST00000243498 SIGLEC1Q9BZZ2 1709 aa12.98□□□□□ -0.33
EXOSC9-201ENST00000243498 SLC52A1Q9NWF4 448 aa12.97□□□□□ -0.33
EXOSC9-201ENST00000243498 NEURL4Q96JN8 1562 aa12.97□□□□□ -0.33
EXOSC9-201ENST00000243498 MROH2AA6NES4 1674 aa12.97□□□□□ -0.33
EXOSC9-201ENST00000243498 MIER1Q8N108 512 aa12.97□□□□□ -0.33
EXOSC9-201ENST00000243498 NOS1P29475 1434 aa12.96□□□□□ -0.33
EXOSC9-201ENST00000243498 POTEIP0CG38 1075 aa12.96□□□□□ -0.34
EXOSC9-201ENST00000243498 PREX1Q8TCU6 1659 aa12.96□□□□□ -0.34
EXOSC9-201ENST00000243498 PHF12Q96QT6 1004 aa12.95□□□□□ -0.34
EXOSC9-201ENST00000243498 CLTCL1P53675 1640 aa12.95□□□□□ -0.34
EXOSC9-201ENST00000243498 ZMYM3Q14202 1370 aa12.94□□□□□ -0.34
EXOSC9-201ENST00000243498 FER1L4A9Z1Z3 1794 aa12.93□□□□□ -0.34
EXOSC9-201ENST00000243498 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
EXOSC9-201ENST00000243498 DCAF11Q8TEB1 546 aa12.93□□□□□ -0.34
EXOSC9-201ENST00000243498 GALR2O43603 387 aaPredicted RBP12.92□□□□□ -0.34
EXOSC9-201ENST00000243498 ERVK-7P63135 1459 aa12.92□□□□□ -0.34
EXOSC9-201ENST00000243498 LHX8Q68G74 356 aa12.91□□□□□ -0.34
EXOSC9-201ENST00000243498 SPATA31D1Q6ZQQ2 1576 aa12.91□□□□□ -0.34
EXOSC9-201ENST00000243498 RPGRIP1LQ68CZ1 1315 aa12.91□□□□□ -0.34
EXOSC9-201ENST00000243498 SPATA31E1Q6ZUB1 1445 aa12.91□□□□□ -0.34
EXOSC9-201ENST00000243498 PIK3C2BO00750 1634 aa12.91□□□□□ -0.34
EXOSC9-201ENST00000243498 CHGAP10645 457 aaKnown RBP12.91□□□□□ -0.34
EXOSC9-201ENST00000243498 PLCD3Q8N3E9 789 aa12.9□□□□□ -0.34
EXOSC9-201ENST00000243498 KDM2AQ9Y2K7 1162 aa12.9□□□□□ -0.34
EXOSC9-201ENST00000243498 UHRF1BP1Q6BDS2 1440 aa12.89□□□□□ -0.35
EXOSC9-201ENST00000243498 SYNMO15061 1565 aa12.89□□□□□ -0.35
EXOSC9-201ENST00000243498 ZNF326Q5BKZ1 582 aaKnown RBP12.89□□□□□ -0.35
EXOSC9-201ENST00000243498 ZNF316A6NFI3 1004 aaPredicted RBP12.88□□□□□ -0.35
EXOSC9-201ENST00000243498 IDI1Q13907 227 aa12.88□□□□□ -0.35
EXOSC9-201ENST00000243498 HDGFP51858 240 aaKnown RBP12.87□□□□□ -0.35
EXOSC9-201ENST00000243498 FBXO31Q5XUX0 539 aaPredicted RBP12.87□□□□□ -0.35
EXOSC9-201ENST00000243498 ADGRB3O60242 1522 aa12.86□□□□□ -0.35
EXOSC9-201ENST00000243498 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
EXOSC9-201ENST00000243498 ZBTB47Q9UFB7 747 aaPredicted RBP12.86□□□□□ -0.35
EXOSC9-201ENST00000243498 UGGT1Q9NYU2 1555 aa12.86□□□□□ -0.35
EXOSC9-201ENST00000243498 C3P01024 1663 aa12.86□□□□□ -0.35
EXOSC9-201ENST00000243498 TNRQ92752 1358 aa12.86□□□□□ -0.35
EXOSC9-201ENST00000243498 ADAMTSL3P82987 1691 aa12.85□□□□□ -0.35
EXOSC9-201ENST00000243498 VGFO15240 615 aaPredicted RBP12.85□□□□□ -0.35
EXOSC9-201ENST00000243498 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
EXOSC9-201ENST00000243498 KDM5AP29375 1690 aaKnown RBP12.84□□□□□ -0.35
EXOSC9-201ENST00000243498 MYOM2P54296 1465 aa12.84□□□□□ -0.35
EXOSC9-201ENST00000243498 EIF4G2P78344 907 aaKnown RBP eCLIP12.84□□□□□ -0.35
EXOSC9-201ENST00000243498 IFT172Q9UG01 1749 aa12.84□□□□□ -0.35
EXOSC9-201ENST00000243498 MADDQ8WXG6 1647 aa12.83□□□□□ -0.36
EXOSC9-201ENST00000243498 PRAG1Q86YV5 1406 aa12.83□□□□□ -0.36
EXOSC9-201ENST00000243498 RIMS1Q86UR5 1692 aaKnown RBP12.83□□□□□ -0.36
EXOSC9-201ENST00000243498 NLRP1Q9C000 1473 aa12.83□□□□□ -0.36
EXOSC9-201ENST00000243498 PPLO60437 1756 aa12.83□□□□□ -0.36
EXOSC9-201ENST00000243498 TMEM131LA2VDJ0 1609 aa12.83□□□□□ -0.36
EXOSC9-201ENST00000243498 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
EXOSC9-201ENST00000243498 SETD1BQ9UPS6 1966 aaKnown RBP12.82□□□□□ -0.36
EXOSC9-201ENST00000243498 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.81□□□□□ -0.36
EXOSC9-201ENST00000243498 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
EXOSC9-201ENST00000243498 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
EXOSC9-201ENST00000243498 TRPM1Q7Z4N2 1603 aa12.8□□□□□ -0.36
EXOSC9-201ENST00000243498 MYO5BQ9ULV0 1848 aa12.8□□□□□ -0.36
EXOSC9-201ENST00000243498 CARD11Q9BXL7 1154 aa12.8□□□□□ -0.36
EXOSC9-201ENST00000243498 ROCK2O75116 1388 aaKnown RBP12.8□□□□□ -0.36
EXOSC9-201ENST00000243498 ZFYVE9O95405 1425 aa12.8□□□□□ -0.36
EXOSC9-201ENST00000243498 CEBPAP49715 358 aaPredicted RBP12.79□□□□□ -0.36
EXOSC9-201ENST00000243498 LAMC1P11047 1609 aa12.78□□□□□ -0.36
EXOSC9-201ENST00000243498 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
EXOSC9-201ENST00000243498 FBXO3Q9UK99 471 aa12.78□□□□□ -0.36
EXOSC9-201ENST00000243498 NEXMIFQ5QGS0 1516 aa12.78□□□□□ -0.36
EXOSC9-201ENST00000243498 A2ML1A8K2U0 1454 aa12.77□□□□□ -0.37
EXOSC9-201ENST00000243498 RASEFQ8IZ41 740 aa12.77□□□□□ -0.37
EXOSC9-201ENST00000243498 THEMISQ8N1K5 641 aaPredicted RBP12.77□□□□□ -0.37
EXOSC9-201ENST00000243498 NRXN1Q9ULB1 1477 aa12.76□□□□□ -0.37
EXOSC9-201ENST00000243498 GPRASP1Q5JY77 1395 aa12.76□□□□□ -0.37
EXOSC9-201ENST00000243498 UBR1Q8IWV7 1749 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms