RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 UNC13AQ9UPW8 1703 aa13.72□□□□□ -0.21
CCDC170-201ENST00000239374 AAMPQ13685 434 aa13.71□□□□□ -0.21
CCDC170-201ENST00000239374 PLPPR3Q6T4P5 718 aa13.71□□□□□ -0.21
CCDC170-201ENST00000239374 TROQ12816 1431 aaPredicted RBP13.71□□□□□ -0.21
CCDC170-201ENST00000239374 ERBINQ96RT1 1412 aa13.71□□□□□ -0.21
CCDC170-201ENST00000239374 KIAA2012Q0VF49 1180 aa13.7□□□□□ -0.22
CCDC170-201ENST00000239374 NOL8Q76FK4 1167 aaKnown RBP13.7□□□□□ -0.22
CCDC170-201ENST00000239374 PTPRGP23470 1445 aa13.7□□□□□ -0.22
CCDC170-201ENST00000239374 DNMBPQ6XZF7 1577 aa13.69□□□□□ -0.22
CCDC170-201ENST00000239374 SOX12O15370 315 aa13.69□□□□□ -0.22
CCDC170-201ENST00000239374 CHAF1AQ13111 956 aaPredicted RBP13.69□□□□□ -0.22
CCDC170-201ENST00000239374 DUSP27Q5VZP5 1158 aa13.69□□□□□ -0.22
CCDC170-201ENST00000239374 ST18O60284 1047 aa13.69□□□□□ -0.22
CCDC170-201ENST00000239374 TERF2IPQ9NYB0 399 aa13.69□□□□□ -0.22
CCDC170-201ENST00000239374 MCM4P33991 863 aa13.68□□□□□ -0.22
CCDC170-201ENST00000239374 MTHFSP49914 203 aa13.68□□□□□ -0.22
CCDC170-201ENST00000239374 HAP1P54257 671 aaPredicted RBP13.68□□□□□ -0.22
CCDC170-201ENST00000239374 CFAP70Q5T0N1 1121 aa13.67□□□□□ -0.22
CCDC170-201ENST00000239374 DHX29Q7Z478 1369 aaKnown RBP13.67□□□□□ -0.22
CCDC170-201ENST00000239374 SYAP1Q96A49 352 aaPredicted RBP13.67□□□□□ -0.22
CCDC170-201ENST00000239374 RIPK4P57078 832 aa13.66□□□□□ -0.22
CCDC170-201ENST00000239374 KCNJ4P48050 445 aa13.66□□□□□ -0.22
CCDC170-201ENST00000239374 FAM13BQ9NYF5 915 aa13.66□□□□□ -0.22
CCDC170-201ENST00000239374 RNF123Q5XPI4 1314 aa13.66□□□□□ -0.22
CCDC170-201ENST00000239374 OS9Q13438 667 aaPredicted RBP13.65□□□□□ -0.22
CCDC170-201ENST00000239374 PLEKHG5O94827 1062 aa13.65□□□□□ -0.22
CCDC170-201ENST00000239374 GOLGA6L4A6NEF3 574 aa13.65□□□□□ -0.22
CCDC170-201ENST00000239374 FOXD4L6Q3SYB3 417 aaPredicted RBP13.65□□□□□ -0.22
CCDC170-201ENST00000239374 FOXD4L3Q6VB84 417 aaPredicted RBP13.65□□□□□ -0.22
CCDC170-201ENST00000239374 C14orf37Q86TY3 774 aa13.65□□□□□ -0.22
CCDC170-201ENST00000239374 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC170-201ENST00000239374 GRIN2BQ13224 1484 aa13.65□□□□□ -0.23
CCDC170-201ENST00000239374 NASPP49321 788 aaPredicted RBP13.64□□□□□ -0.23
CCDC170-201ENST00000239374 CUL7Q14999 1698 aa13.64□□□□□ -0.23
CCDC170-201ENST00000239374 TSR2Q969E8 191 aaKnown RBP13.63□□□□□ -0.23
CCDC170-201ENST00000239374 GRPEL1Q9HAV7 217 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 TRIM6-TRIM34B2RNG4 842 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
CCDC170-201ENST00000239374 SLC4A10Q6U841 1118 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 WWC1Q8IX03 1113 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 STAC3Q96MF2 364 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 CFAP43Q8NDM7 1665 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 MCTP1Q6DN14 999 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 C8orf34Q49A92 452 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 DRC7Q8IY82 874 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 EVC2Q86UK5 1308 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 IGHDP01880 384 aa13.63□□□□□ -0.23
CCDC170-201ENST00000239374 KIF16BQ96L93 1317 aa13.62□□□□□ -0.23
CCDC170-201ENST00000239374 CAMSAP2Q08AD1 1489 aa13.62□□□□□ -0.23
CCDC170-201ENST00000239374 ZRSR1Q15695 479 aaKnown RBP13.62□□□□□ -0.23
CCDC170-201ENST00000239374 TBC1D2Q9BYX2 928 aa13.62□□□□□ -0.23
CCDC170-201ENST00000239374 HMMRO75330 724 aa13.61□□□□□ -0.23
CCDC170-201ENST00000239374 SLC12A5Q9H2X9 1139 aa13.61□□□□□ -0.23
CCDC170-201ENST00000239374 PLEKHH2Q8IVE3 1493 aa13.61□□□□□ -0.23
CCDC170-201ENST00000239374 ESPNB1AK53 854 aa13.61□□□□□ -0.23
CCDC170-201ENST00000239374 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
CCDC170-201ENST00000239374 MVPQ14764 893 aaKnown RBP13.6□□□□□ -0.23
CCDC170-201ENST00000239374 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
CCDC170-201ENST00000239374 RTF1Q92541 710 aaKnown RBP13.6□□□□□ -0.23
CCDC170-201ENST00000239374 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
CCDC170-201ENST00000239374 TMEM132EQ6IEE7 984 aa13.6□□□□□ -0.23
CCDC170-201ENST00000239374 LRPPRCP42704 1394 aaKnown RBP13.6□□□□□ -0.23
CCDC170-201ENST00000239374 KIAA1211Q6ZU35 1233 aa13.6□□□□□ -0.23
CCDC170-201ENST00000239374 GGNBP2Q9H3C7 697 aa13.6□□□□□ -0.23
CCDC170-201ENST00000239374 DISP3Q9P2K9 1392 aa13.59□□□□□ -0.23
CCDC170-201ENST00000239374 NUCB2P80303 420 aa13.59□□□□□ -0.23
CCDC170-201ENST00000239374 R3HCC1Q9Y3T6 440 aaKnown RBP13.59□□□□□ -0.23
CCDC170-201ENST00000239374 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.23
CCDC170-201ENST00000239374 SNAPC4Q5SXM2 1469 aa13.58□□□□□ -0.23
CCDC170-201ENST00000239374 CC2D2AQ9P2K1 1620 aa13.58□□□□□ -0.23
CCDC170-201ENST00000239374 IQGAP2Q13576 1575 aa13.58□□□□□ -0.24
CCDC170-201ENST00000239374 PARD3Q8TEW0 1356 aa13.58□□□□□ -0.24
CCDC170-201ENST00000239374 FGD1P98174 961 aa13.58□□□□□ -0.24
CCDC170-201ENST00000239374 LMOD3Q0VAK6 560 aa13.58□□□□□ -0.24
CCDC170-201ENST00000239374 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
CCDC170-201ENST00000239374 WDR63Q8IWG1 891 aa13.58□□□□□ -0.24
CCDC170-201ENST00000239374 NOB1Q9ULX3 412 aaKnown RBP13.58□□□□□ -0.24
CCDC170-201ENST00000239374 RARSP54136 660 aaKnown RBP13.57□□□□□ -0.24
CCDC170-201ENST00000239374 MINK1Q8N4C8 1332 aaPredicted RBP13.57□□□□□ -0.24
CCDC170-201ENST00000239374 THOC2Q8NI27 1593 aaKnown RBP13.57□□□□□ -0.24
CCDC170-201ENST00000239374 AFAP1Q8N556 730 aa13.57□□□□□ -0.24
CCDC170-201ENST00000239374 PKNOX2Q96KN3 472 aa13.57□□□□□ -0.24
CCDC170-201ENST00000239374 PHF14O94880 888 aa13.57□□□□□ -0.24
CCDC170-201ENST00000239374 C1orf115Q9H7X2 142 aa13.56□□□□□ -0.24
CCDC170-201ENST00000239374 REC8O95072 547 aa13.56□□□□□ -0.24
CCDC170-201ENST00000239374 RILPL2Q969X0 211 aa13.56□□□□□ -0.24
CCDC170-201ENST00000239374 CDC45O75419 566 aa13.56□□□□□ -0.24
CCDC170-201ENST00000239374 ISY1Q9ULR0 285 aaKnown RBP13.56□□□□□ -0.24
CCDC170-201ENST00000239374 RALGAPBQ86X10 1494 aa13.56□□□□□ -0.24
CCDC170-201ENST00000239374 ATF7IPQ6VMQ6 1270 aa13.55□□□□□ -0.24
CCDC170-201ENST00000239374 RNF214Q8ND24 703 aa13.55□□□□□ -0.24
CCDC170-201ENST00000239374 CABP2Q9NPB3 220 aa13.55□□□□□ -0.24
CCDC170-201ENST00000239374 STK31Q9BXU1 1019 aa13.55□□□□□ -0.24
CCDC170-201ENST00000239374 API5Q9BZZ5 524 aaKnown RBP13.55□□□□□ -0.24
CCDC170-201ENST00000239374 VGFO15240 615 aaPredicted RBP13.55□□□□□ -0.24
CCDC170-201ENST00000239374 TPM2P07951 284 aa13.54□□□□□ -0.24
CCDC170-201ENST00000239374 HMOX1P09601 288 aa13.54□□□□□ -0.24
CCDC170-201ENST00000239374 CCDC173Q0VFZ6 552 aa13.54□□□□□ -0.24
CCDC170-201ENST00000239374 TCOF1Q13428 1488 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms