RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 ST20-MTHFSA0A0A6YYL1 179 aa21.29■■□□□ 1
HDHD3-201ENST00000238379 SPATA31D1Q6ZQQ2 1576 aa21.28■■□□□ 1
HDHD3-201ENST00000238379 ZMYM3Q14202 1370 aa21.28■■□□□ 1
HDHD3-201ENST00000238379 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
HDHD3-201ENST00000238379 KIF7Q2M1P5 1343 aa21.28■■□□□ 1
HDHD3-201ENST00000238379 POLR1AO95602 1720 aaPredicted RBP21.27■■□□□ 1
HDHD3-201ENST00000238379 PPLO60437 1756 aa21.27■■□□□ 1
HDHD3-201ENST00000238379 KIAA1210Q9ULL0 1709 aa21.27■■□□□ 1
HDHD3-201ENST00000238379 TMEM131LA2VDJ0 1609 aa21.25■□□□□ 0.99
HDHD3-201ENST00000238379 NEXMIFQ5QGS0 1516 aa21.23■□□□□ 0.99
HDHD3-201ENST00000238379 CFAP70Q5T0N1 1121 aa21.22■□□□□ 0.99
HDHD3-201ENST00000238379 PIK3C2GO75747 1445 aa21.22■□□□□ 0.99
HDHD3-201ENST00000238379 IQGAP1P46940 1657 aa21.2■□□□□ 0.98
HDHD3-201ENST00000238379 SCAF11Q99590 1463 aaKnown RBP21.19■□□□□ 0.98
HDHD3-201ENST00000238379 ZFYVE9O95405 1425 aa21.19■□□□□ 0.98
HDHD3-201ENST00000238379 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
HDHD3-201ENST00000238379 MYO5BQ9ULV0 1848 aa21.19■□□□□ 0.98
HDHD3-201ENST00000238379 TESK2Q96S53 571 aa21.18■□□□□ 0.98
HDHD3-201ENST00000238379 C14orf93Q9H972 538 aaKnown RBP21.18■□□□□ 0.98
HDHD3-201ENST00000238379 A2ML1A8K2U0 1454 aa21.15■□□□□ 0.98
HDHD3-201ENST00000238379 NUTM2DQ5VT03 806 aaPredicted RBP21.15■□□□□ 0.98
HDHD3-201ENST00000238379 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
HDHD3-201ENST00000238379 STAG3Q9UJ98 1225 aa21.14■□□□□ 0.97
HDHD3-201ENST00000238379 ANP32CO43423 234 aa21.13■□□□□ 0.97
HDHD3-201ENST00000238379 TNRQ92752 1358 aa21.13■□□□□ 0.97
HDHD3-201ENST00000238379 ADGRB1O14514 1584 aa21.11■□□□□ 0.97
HDHD3-201ENST00000238379 EIF3AQ14152 1382 aaKnown RBP21.1■□□□□ 0.97
HDHD3-201ENST00000238379 POLR3GLQ9BT43 218 aa21.1■□□□□ 0.97
HDHD3-201ENST00000238379 DISP3Q9P2K9 1392 aa21.09■□□□□ 0.97
HDHD3-201ENST00000238379 FER1L4A9Z1Z3 1794 aa21.09■□□□□ 0.97
HDHD3-201ENST00000238379 CEBPAP49715 358 aaPredicted RBP21.08■□□□□ 0.97
HDHD3-201ENST00000238379 TMF1P82094 1093 aa21.08■□□□□ 0.96
HDHD3-201ENST00000238379 C3P01024 1663 aa21.07■□□□□ 0.96
HDHD3-201ENST00000238379 TMEM132EQ6IEE7 984 aa21.06■□□□□ 0.96
HDHD3-201ENST00000238379 RIMS2Q9UQ26 1411 aa21.05■□□□□ 0.96
HDHD3-201ENST00000238379 KDM5AP29375 1690 aaKnown RBP21.04■□□□□ 0.96
HDHD3-201ENST00000238379 NLRP1Q9C000 1473 aa21.03■□□□□ 0.96
HDHD3-201ENST00000238379 CCER2I3L3R5 266 aa21.03■□□□□ 0.96
HDHD3-201ENST00000238379 MYO3AQ8NEV4 1616 aa21.02■□□□□ 0.96
HDHD3-201ENST00000238379 TRAK1Q9UPV9 953 aa21.01■□□□□ 0.95
HDHD3-201ENST00000238379 AEBP2Q6ZN18 517 aaPredicted RBP21.01■□□□□ 0.95
HDHD3-201ENST00000238379 UBR1Q8IWV7 1749 aa21.01■□□□□ 0.95
HDHD3-201ENST00000238379 ASXL1Q8IXJ9 1541 aa21■□□□□ 0.95
HDHD3-201ENST00000238379 SBNO2Q9Y2G9 1366 aa21■□□□□ 0.95
HDHD3-201ENST00000238379 SLC24A1O60721 1099 aa20.99■□□□□ 0.95
HDHD3-201ENST00000238379 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.99■□□□□ 0.95
HDHD3-201ENST00000238379 ALKQ9UM73 1620 aa20.98■□□□□ 0.95
HDHD3-201ENST00000238379 CENPJQ9HC77 1338 aaPredicted RBP20.98■□□□□ 0.95
HDHD3-201ENST00000238379 PRKRIP1Q9H875 184 aaPredicted RBP20.98■□□□□ 0.95
HDHD3-201ENST00000238379 TMEM2Q9UHN6 1383 aa20.98■□□□□ 0.95
HDHD3-201ENST00000238379 CDCA8Q53HL2 280 aa20.97■□□□□ 0.95
HDHD3-201ENST00000238379 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
HDHD3-201ENST00000238379 YTHDC1Q96MU7 727 aaKnown RBP20.97■□□□□ 0.95
HDHD3-201ENST00000238379 HDGFP51858 240 aaKnown RBP20.96■□□□□ 0.95
HDHD3-201ENST00000238379 ADAMTSL3P82987 1691 aa20.96■□□□□ 0.95
HDHD3-201ENST00000238379 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
HDHD3-201ENST00000238379 RIMS1Q86UR5 1692 aaKnown RBP20.94■□□□□ 0.94
HDHD3-201ENST00000238379 PTPRMP28827 1452 aa20.93■□□□□ 0.94
HDHD3-201ENST00000238379 ARHGEF28Q8N1W1 1705 aaKnown RBP20.93■□□□□ 0.94
HDHD3-201ENST00000238379 YTHDC2Q9H6S0 1430 aaKnown RBP20.92■□□□□ 0.94
HDHD3-201ENST00000238379 NRXN3Q9Y4C0 1643 aa20.92■□□□□ 0.94
HDHD3-201ENST00000238379 QRICH2Q9H0J4 1663 aa20.92■□□□□ 0.94
HDHD3-201ENST00000238379 PER1O15534 1290 aaPredicted RBP20.91■□□□□ 0.94
HDHD3-201ENST00000238379 SETD1AO15047 1707 aaKnown RBP20.91■□□□□ 0.94
HDHD3-201ENST00000238379 STK26Q9P289 416 aa20.9■□□□□ 0.94
HDHD3-201ENST00000238379 PANK3Q9H999 370 aa20.89■□□□□ 0.93
HDHD3-201ENST00000238379 ARHGAP23Q9P227 1491 aa20.88■□□□□ 0.93
HDHD3-201ENST00000238379 SLIT1O75093 1534 aa20.88■□□□□ 0.93
HDHD3-201ENST00000238379 LTKP29376 864 aa20.88■□□□□ 0.93
HDHD3-201ENST00000238379 THEMISQ8N1K5 641 aaPredicted RBP20.86■□□□□ 0.93
HDHD3-201ENST00000238379 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
HDHD3-201ENST00000238379 MYOM1P52179 1685 aa20.85■□□□□ 0.93
HDHD3-201ENST00000238379 CENPBP07199 599 aaPredicted RBP20.85■□□□□ 0.93
HDHD3-201ENST00000238379 PLEKHG1Q9ULL1 1385 aa20.85■□□□□ 0.93
HDHD3-201ENST00000238379 METP08581 1390 aa20.84■□□□□ 0.93
HDHD3-201ENST00000238379 TXNDC2Q86VQ3 553 aa20.84■□□□□ 0.93
HDHD3-201ENST00000238379 ABCC11Q96J66 1382 aa20.83■□□□□ 0.93
HDHD3-201ENST00000238379 DLC1Q96QB1 1528 aa20.83■□□□□ 0.92
HDHD3-201ENST00000238379 CCDC184Q52MB2 194 aa20.83■□□□□ 0.92
HDHD3-201ENST00000238379 PRAM1Q96QH2 718 aa20.83■□□□□ 0.92
HDHD3-201ENST00000238379 EID1Q9Y6B2 187 aa20.83■□□□□ 0.92
HDHD3-201ENST00000238379 ADAMTS13Q76LX8 1427 aa20.82■□□□□ 0.92
HDHD3-201ENST00000238379 KTN1Q86UP2 1357 aaKnown RBP20.82■□□□□ 0.92
HDHD3-201ENST00000238379 CEP170BQ9Y4F5 1589 aaPredicted RBP20.82■□□□□ 0.92
HDHD3-201ENST00000238379 CNGB1Q14028 1251 aaPredicted RBP20.81■□□□□ 0.92
HDHD3-201ENST00000238379 PUS7Q96PZ0 661 aaKnown RBP20.81■□□□□ 0.92
HDHD3-201ENST00000238379 TULP4Q9NRJ4 1543 aa20.81■□□□□ 0.92
HDHD3-201ENST00000238379 EVC2Q86UK5 1308 aa20.81■□□□□ 0.92
HDHD3-201ENST00000238379 SAFB2Q14151 953 aaKnown RBP eCLIP20.81■□□□□ 0.92
HDHD3-201ENST00000238379 BCANQ96GW7 911 aa20.8■□□□□ 0.92
HDHD3-201ENST00000238379 POGKQ9P215 609 aa20.8■□□□□ 0.92
HDHD3-201ENST00000238379 RALBP1Q15311 655 aa20.79■□□□□ 0.92
HDHD3-201ENST00000238379 MED14O60244 1454 aa20.79■□□□□ 0.92
HDHD3-201ENST00000238379 PARD3Q8TEW0 1356 aa20.78■□□□□ 0.92
HDHD3-201ENST00000238379 SETD1BQ9UPS6 1966 aaKnown RBP20.77■□□□□ 0.92
HDHD3-201ENST00000238379 TECPR2O15040 1411 aa20.77■□□□□ 0.91
HDHD3-201ENST00000238379 MRS2Q9HD23 443 aa20.76■□□□□ 0.91
HDHD3-201ENST00000238379 ZNF142P52746 1687 aaPredicted RBP20.76■□□□□ 0.91
HDHD3-201ENST00000238379 MINK1Q8N4C8 1332 aaPredicted RBP20.75■□□□□ 0.91
HDHD3-201ENST00000238379 WAPLQ7Z5K2 1190 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms