RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 PRDM15P57071 1507 aaPredicted RBP20.85■□□□□ 0.93
DDX1-201ENST00000233084 DDRGK1Q96HY6 314 aa20.84■□□□□ 0.93
DDX1-201ENST00000233084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.84■□□□□ 0.937e-7■■□□□ 12.5
DDX1-201ENST00000233084 VWDEQ8N2E2 1590 aa20.83■□□□□ 0.92
DDX1-201ENST00000233084 NBPF8Q3BBV2 869 aa20.83■□□□□ 0.92
DDX1-201ENST00000233084 KIF3BO15066 747 aa20.82■□□□□ 0.92
DDX1-201ENST00000233084 PKD2Q13563 968 aa20.82■□□□□ 0.92
DDX1-201ENST00000233084 ANKRD30BQ9BXX2 1392 aa20.82■□□□□ 0.92
DDX1-201ENST00000233084 MS4A1P11836 297 aa20.81■□□□□ 0.92
DDX1-201ENST00000233084 TMC1Q8TDI8 760 aa20.81■□□□□ 0.92
DDX1-201ENST00000233084 DCAF11Q8TEB1 546 aa20.81■□□□□ 0.92
DDX1-201ENST00000233084 ARHGEF40Q8TER5 1519 aa20.8■□□□□ 0.92
DDX1-201ENST00000233084 SIGLEC1Q9BZZ2 1709 aa20.79■□□□□ 0.92
DDX1-201ENST00000233084 REREQ9P2R6 1566 aa20.78■□□□□ 0.92
DDX1-201ENST00000233084 FRAT2O75474 233 aaPredicted RBP20.78■□□□□ 0.92
DDX1-201ENST00000233084 ATP10AO60312 1499 aa20.78■□□□□ 0.92
DDX1-201ENST00000233084 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.92
DDX1-201ENST00000233084 PNISRQ8TF01 805 aaKnown RBP20.77■□□□□ 0.92
DDX1-201ENST00000233084 RCAN3Q9UKA8 241 aa20.77■□□□□ 0.92
DDX1-201ENST00000233084 E9PCH4 1651 aa20.77■□□□□ 0.92
DDX1-201ENST00000233084 TET3O43151 1660 aa20.77■□□□□ 0.92
DDX1-201ENST00000233084 CEP152O94986 1710 aa20.76■□□□□ 0.91
DDX1-201ENST00000233084 PLIN1O60240 522 aa20.74■□□□□ 0.91
DDX1-201ENST00000233084 KANK1Q14678 1352 aa20.73■□□□□ 0.91
DDX1-201ENST00000233084 RPRD2Q5VT52 1461 aaKnown RBP20.72■□□□□ 0.91
DDX1-201ENST00000233084 LMTK2Q8IWU2 1503 aa20.71■□□□□ 0.91
DDX1-201ENST00000233084 AGLP35573 1532 aa20.7■□□□□ 0.9
DDX1-201ENST00000233084 PLA2R1Q13018 1463 aa20.7■□□□□ 0.9
DDX1-201ENST00000233084 EFCAB6Q5THR3 1501 aa20.69■□□□□ 0.9
DDX1-201ENST00000233084 ZNF326Q5BKZ1 582 aaKnown RBP20.69■□□□□ 0.9
DDX1-201ENST00000233084 GGT6Q6P531 493 aa20.69■□□□□ 0.9
DDX1-201ENST00000233084 VSIG10Q8N0Z9 540 aa20.68■□□□□ 0.9
DDX1-201ENST00000233084 ABCC3O15438 1527 aa20.68■□□□□ 0.9
DDX1-201ENST00000233084 SPHKAPQ2M3C7 1700 aa20.67■□□□□ 0.9
DDX1-201ENST00000233084 ZC3H13Q5T200 1668 aaKnown RBP20.66■□□□□ 0.9
DDX1-201ENST00000233084 SPATA31E1Q6ZUB1 1445 aa20.66■□□□□ 0.9
DDX1-201ENST00000233084 CAMSAP1Q5T5Y3 1602 aa20.65■□□□□ 0.9
DDX1-201ENST00000233084 GLIPR1L2Q4G1C9 344 aa20.65■□□□□ 0.9
DDX1-201ENST00000233084 RRAGDQ9NQL2 400 aaPredicted RBP20.64■□□□□ 0.9
DDX1-201ENST00000233084 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
DDX1-201ENST00000233084 CDCA7LQ96GN5 454 aa20.63■□□□□ 0.89
DDX1-201ENST00000233084 ZMYND15Q9H091 742 aa20.63■□□□□ 0.89
DDX1-201ENST00000233084 ARXQ96QS3 562 aa20.62■□□□□ 0.89
DDX1-201ENST00000233084 CFAP65Q6ZU64 1925 aaKnown RBP20.62■□□□□ 0.89
DDX1-201ENST00000233084 TRPM2O94759 1503 aa20.62■□□□□ 0.89
DDX1-201ENST00000233084 PTPRTO14522 1441 aa20.61■□□□□ 0.89
DDX1-201ENST00000233084 CCDC144AA2RUR9 1427 aa20.6■□□□□ 0.89
DDX1-201ENST00000233084 NPATQ14207 1427 aa20.59■□□□□ 0.89
DDX1-201ENST00000233084 POGKQ9P215 609 aa20.59■□□□□ 0.89
DDX1-201ENST00000233084 CLTCL1P53675 1640 aa20.58■□□□□ 0.88
DDX1-201ENST00000233084 CLTCQ00610 1675 aaKnown RBP20.56■□□□□ 0.88
DDX1-201ENST00000233084 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
DDX1-201ENST00000233084 POLR1AO95602 1720 aaPredicted RBP20.55■□□□□ 0.88
DDX1-201ENST00000233084 LRPPRCP42704 1394 aaKnown RBP20.53■□□□□ 0.88
DDX1-201ENST00000233084 USP47Q96K76 1375 aa20.53■□□□□ 0.88
DDX1-201ENST00000233084 ARHGAP31Q2M1Z3 1444 aa20.53■□□□□ 0.88
DDX1-201ENST00000233084 UGGT1Q9NYU2 1555 aa20.53■□□□□ 0.88
DDX1-201ENST00000233084 C20orf194Q5TEA3 1177 aa20.53■□□□□ 0.88
DDX1-201ENST00000233084 RGS3P49796 1198 aa20.52■□□□□ 0.88
DDX1-201ENST00000233084 FAM161AQ3B820 660 aa20.52■□□□□ 0.87
DDX1-201ENST00000233084 MLECQ14165 292 aa20.51■□□□□ 0.87
DDX1-201ENST00000233084 C8orf34Q49A92 452 aa20.51■□□□□ 0.87
DDX1-201ENST00000233084 PREX1Q8TCU6 1659 aa20.5■□□□□ 0.87
DDX1-201ENST00000233084 PPP6R1Q9UPN7 881 aa20.5■□□□□ 0.87
DDX1-201ENST00000233084 SYNMO15061 1565 aa20.49■□□□□ 0.87
DDX1-201ENST00000233084 MYBBP1AQ9BQG0 1328 aaKnown RBP20.49■□□□□ 0.87
DDX1-201ENST00000233084 HSP90AA2PQ14568 343 aaPredicted RBP20.49■□□□□ 0.87
DDX1-201ENST00000233084 NOS1P29475 1434 aa20.49■□□□□ 0.87
DDX1-201ENST00000233084 KIF1BO60333 1816 aa20.48■□□□□ 0.87
DDX1-201ENST00000233084 ARID4BQ4LE39 1312 aaPredicted RBP20.48■□□□□ 0.87
DDX1-201ENST00000233084 PIK3C2BO00750 1634 aa20.47■□□□□ 0.87
DDX1-201ENST00000233084 MROH2AA6NES4 1674 aa20.46■□□□□ 0.87
DDX1-201ENST00000233084 BRD4O60885 1362 aaPredicted RBP20.46■□□□□ 0.87
DDX1-201ENST00000233084 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
DDX1-201ENST00000233084 PDE3BQ13370 1112 aa20.45■□□□□ 0.86
DDX1-201ENST00000233084 KTN1Q86UP2 1357 aaKnown RBP20.45■□□□□ 0.86
DDX1-201ENST00000233084 NEURL4Q96JN8 1562 aa20.44■□□□□ 0.86
DDX1-201ENST00000233084 PNNQ9H307 717 aaKnown RBP20.44■□□□□ 0.86
DDX1-201ENST00000233084 HSP90AA1P07900 732 aaKnown RBP20.43■□□□□ 0.86
DDX1-201ENST00000233084 KDM2BQ8NHM5 1336 aa20.43■□□□□ 0.86
DDX1-201ENST00000233084 RGL3Q3MIN7 710 aa20.42■□□□□ 0.86
DDX1-201ENST00000233084 CENPQQ7L2Z9 268 aaPredicted RBP20.41■□□□□ 0.86
DDX1-201ENST00000233084 ERVK-7P63135 1459 aa20.41■□□□□ 0.86
DDX1-201ENST00000233084 FER1L4A9Z1Z3 1794 aa20.41■□□□□ 0.86
DDX1-201ENST00000233084 UHRF1BP1Q6BDS2 1440 aa20.4■□□□□ 0.86
DDX1-201ENST00000233084 ADGRB3O60242 1522 aa20.4■□□□□ 0.86
DDX1-201ENST00000233084 RALBP1Q15311 655 aa20.4■□□□□ 0.86
DDX1-201ENST00000233084 L1TD1Q5T7N2 865 aaKnown RBP20.4■□□□□ 0.86
DDX1-201ENST00000233084 SPATA31D1Q6ZQQ2 1576 aa20.39■□□□□ 0.86
DDX1-201ENST00000233084 FBXO31Q5XUX0 539 aaPredicted RBP20.39■□□□□ 0.85
DDX1-201ENST00000233084 IFT172Q9UG01 1749 aa20.39■□□□□ 0.85
DDX1-201ENST00000233084 ZMYM3Q14202 1370 aa20.37■□□□□ 0.85
DDX1-201ENST00000233084 MYO5BQ9ULV0 1848 aa20.36■□□□□ 0.85
DDX1-201ENST00000233084 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
DDX1-201ENST00000233084 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
DDX1-201ENST00000233084 NLRP13Q86W25 1043 aa20.36■□□□□ 0.85
DDX1-201ENST00000233084 PANK2Q9BZ23 570 aa20.36■□□□□ 0.85
DDX1-201ENST00000233084 GZF1Q9H116 711 aaPredicted RBP20.36■□□□□ 0.85
DDX1-201ENST00000233084 ROCK2O75116 1388 aaKnown RBP20.36■□□□□ 0.85
DDX1-201ENST00000233084 ESF1Q9H501 851 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms