RNA–Protein interactions for RNA: ENST00000227474.7

PUS3-201, Transcript of pseudouridylate synthase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PUS3, Length 1,843 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUS3-201ENST00000227474 PPM1GO15355 546 aaPredicted RBP11.79□□□□□ -0.52
PUS3-201ENST00000227474 NEUROD2Q15784 382 aa11.79□□□□□ -0.52
PUS3-201ENST00000227474 MYO5CQ9NQX4 1742 aa11.78□□□□□ -0.52
PUS3-201ENST00000227474 ARAP3Q8WWN8 1544 aa11.78□□□□□ -0.52
PUS3-201ENST00000227474 MAPK8IP2Q13387 824 aaPredicted RBP11.77□□□□□ -0.52
PUS3-201ENST00000227474 RALGAPBQ86X10 1494 aa11.77□□□□□ -0.53
PUS3-201ENST00000227474 TEX2Q8IWB9 1127 aa11.76□□□□□ -0.53
PUS3-201ENST00000227474 MAGI2Q86UL8 1455 aa11.76□□□□□ -0.53
PUS3-201ENST00000227474 APBB1O00213 710 aa11.76□□□□□ -0.53
PUS3-201ENST00000227474 KIF7Q2M1P5 1343 aa11.76□□□□□ -0.53
PUS3-201ENST00000227474 ZNF526Q8TF50 670 aaPredicted RBP11.76□□□□□ -0.53
PUS3-201ENST00000227474 DUOX2Q9NRD8 1548 aa11.76□□□□□ -0.53
PUS3-201ENST00000227474 ABCC1P33527 1531 aa11.75□□□□□ -0.53
PUS3-201ENST00000227474 EFCAB2Q5VUJ9 269 aa11.75□□□□□ -0.53
PUS3-201ENST00000227474 ERBINQ96RT1 1412 aa11.75□□□□□ -0.53
PUS3-201ENST00000227474 CCDC27Q2M243 656 aa11.74□□□□□ -0.53
PUS3-201ENST00000227474 SUPT16HQ9Y5B9 1047 aaKnown RBP11.74□□□□□ -0.53
PUS3-201ENST00000227474 KDM5CP41229 1560 aa11.74□□□□□ -0.53
PUS3-201ENST00000227474 ATP10AO60312 1499 aa11.73□□□□□ -0.53
PUS3-201ENST00000227474 PLA2R1Q13018 1463 aa11.73□□□□□ -0.53
PUS3-201ENST00000227474 POLR1AO95602 1720 aaPredicted RBP11.73□□□□□ -0.53
PUS3-201ENST00000227474 USP47Q96K76 1375 aa11.73□□□□□ -0.53
PUS3-201ENST00000227474 IQGAP3Q86VI3 1631 aa11.73□□□□□ -0.53
PUS3-201ENST00000227474 CNPY4Q8N129 248 aa11.73□□□□□ -0.53
PUS3-201ENST00000227474 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
PUS3-201ENST00000227474 RTEL1-TNFRSF6BF6WH68 1400 aa11.72□□□□□ -0.53
PUS3-201ENST00000227474 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.54
PUS3-201ENST00000227474 TRAPPC8Q9Y2L5 1435 aa11.71□□□□□ -0.54
PUS3-201ENST00000227474 WDR7Q9Y4E6 1490 aa11.7□□□□□ -0.54
PUS3-201ENST00000227474 PLCD4Q9BRC7 762 aa11.7□□□□□ -0.54
PUS3-201ENST00000227474 PRKRIP1Q9H875 184 aaPredicted RBP11.7□□□□□ -0.54
PUS3-201ENST00000227474 TMCO4Q5TGY1 634 aa11.7□□□□□ -0.54
PUS3-201ENST00000227474 CCDC144AA2RUR9 1427 aa11.69□□□□□ -0.54
PUS3-201ENST00000227474 BCORL1Q5H9F3 1711 aa11.69□□□□□ -0.54
PUS3-201ENST00000227474 E9PSI1 815 aa11.68□□□□□ -0.54
PUS3-201ENST00000227474 AEBP1Q8IUX7 1158 aa11.68□□□□□ -0.54
PUS3-201ENST00000227474 SALL2Q9Y467 1007 aaPredicted RBP11.68□□□□□ -0.54
PUS3-201ENST00000227474 DHX29Q7Z478 1369 aaKnown RBP11.68□□□□□ -0.54
PUS3-201ENST00000227474 PRAG1Q86YV5 1406 aa11.68□□□□□ -0.54
PUS3-201ENST00000227474 DCAF8L1A6NGE4 600 aa11.67□□□□□ -0.54
PUS3-201ENST00000227474 CHRM1P11229 460 aaPredicted RBP11.67□□□□□ -0.54
PUS3-201ENST00000227474 ABCA9Q8IUA7 1624 aa11.67□□□□□ -0.54
PUS3-201ENST00000227474 ROCK2O75116 1388 aaKnown RBP11.67□□□□□ -0.54
PUS3-201ENST00000227474 ERICH6BQ5W0A0 696 aa11.67□□□□□ -0.54
PUS3-201ENST00000227474 ZFYVE16Q7Z3T8 1539 aa11.66□□□□□ -0.54
PUS3-201ENST00000227474 GPRASP1Q5JY77 1395 aa11.66□□□□□ -0.54
PUS3-201ENST00000227474 KDM4AO75164 1064 aa11.65□□□□□ -0.54
PUS3-201ENST00000227474 DCAF11Q8TEB1 546 aa11.65□□□□□ -0.54
PUS3-201ENST00000227474 CARD11Q9BXL7 1154 aa11.65□□□□□ -0.54
PUS3-201ENST00000227474 SPAG9O60271 1321 aaKnown RBP11.65□□□□□ -0.54
PUS3-201ENST00000227474 A2MP01023 1474 aa11.65□□□□□ -0.54
PUS3-201ENST00000227474 CCDC184Q52MB2 194 aa11.64□□□□□ -0.55
PUS3-201ENST00000227474 LAMC1P11047 1609 aa11.64□□□□□ -0.55
PUS3-201ENST00000227474 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.63□□□□□ -0.55
PUS3-201ENST00000227474 TRPM1Q7Z4N2 1603 aa11.63□□□□□ -0.55
PUS3-201ENST00000227474 FANCAO15360 1455 aa11.63□□□□□ -0.55
PUS3-201ENST00000227474 INO80Q9ULG1 1556 aaPredicted RBP11.63□□□□□ -0.55
PUS3-201ENST00000227474 TRAIPQ9BWF2 469 aa11.63□□□□□ -0.55
PUS3-201ENST00000227474 DEPDC5O75140 1603 aa11.62□□□□□ -0.55
PUS3-201ENST00000227474 PTPRTO14522 1441 aa11.62□□□□□ -0.55
PUS3-201ENST00000227474 ASXL2Q76L83 1435 aa11.62□□□□□ -0.55
PUS3-201ENST00000227474 SETQ01105 290 aaPredicted RBP11.62□□□□□ -0.55
PUS3-201ENST00000227474 AFAP1Q8N556 730 aa11.62□□□□□ -0.55
PUS3-201ENST00000227474 VWDEQ8N2E2 1590 aa11.62□□□□□ -0.55
PUS3-201ENST00000227474 NAP1L2Q9ULW6 460 aaPredicted RBP11.61□□□□□ -0.55
PUS3-201ENST00000227474 ATP7AQ04656 1500 aa11.61□□□□□ -0.55
PUS3-201ENST00000227474 ST20-MTHFSA0A0A6YYL1 179 aa11.6□□□□□ -0.55
PUS3-201ENST00000227474 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
PUS3-201ENST00000227474 EIF2AK4Q9P2K8 1649 aaKnown RBP11.6□□□□□ -0.55
PUS3-201ENST00000227474 GRIPAP1Q4V328 841 aa11.6□□□□□ -0.55
PUS3-201ENST00000227474 CCDC125Q86Z20 511 aa11.6□□□□□ -0.55
PUS3-201ENST00000227474 GZF1Q9H116 711 aaPredicted RBP11.6□□□□□ -0.55
PUS3-201ENST00000227474 TRPM2O94759 1503 aa11.59□□□□□ -0.55
PUS3-201ENST00000227474 MRS2Q9HD23 443 aa11.59□□□□□ -0.55
PUS3-201ENST00000227474 PRDM15P57071 1507 aaPredicted RBP11.59□□□□□ -0.55
PUS3-201ENST00000227474 VASPP50552 380 aaPredicted RBP11.58□□□□□ -0.56
PUS3-201ENST00000227474 LMOD2Q6P5Q4 547 aa11.58□□□□□ -0.56
PUS3-201ENST00000227474 CCDC82Q8N4S0 544 aa11.58□□□□□ -0.56
PUS3-201ENST00000227474 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
PUS3-201ENST00000227474 ADGRL1O94910 1474 aa11.58□□□□□ -0.56
PUS3-201ENST00000227474 DEKP35659 375 aaKnown RBP11.58□□□□□ -0.56
PUS3-201ENST00000227474 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
PUS3-201ENST00000227474 E9PCH4 1651 aa11.57□□□□□ -0.56
PUS3-201ENST00000227474 KTN1Q86UP2 1357 aaKnown RBP11.57□□□□□ -0.56
PUS3-201ENST00000227474 ANAPC15P60006 121 aa11.57□□□□□ -0.56
PUS3-201ENST00000227474 SECISBP2LQ93073 1101 aaKnown RBP11.57□□□□□ -0.56
PUS3-201ENST00000227474 STAC3Q96MF2 364 aa11.57□□□□□ -0.56
PUS3-201ENST00000227474 NEURL4Q96JN8 1562 aa11.57□□□□□ -0.56
PUS3-201ENST00000227474 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
PUS3-201ENST00000227474 NBPF1Q3BBV0 1214 aa11.56□□□□□ -0.56
PUS3-201ENST00000227474 RGL3Q3MIN7 710 aa11.56□□□□□ -0.56
PUS3-201ENST00000227474 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
PUS3-201ENST00000227474 TET3O43151 1660 aa11.56□□□□□ -0.56
PUS3-201ENST00000227474 MAFGO15525 162 aa11.56□□□□□ -0.56
PUS3-201ENST00000227474 PTMSP20962 102 aa11.56□□□□□ -0.56
PUS3-201ENST00000227474 MROH1Q8NDA8 1641 aa11.55□□□□□ -0.56
PUS3-201ENST00000227474 RNF17Q9BXT8 1623 aaKnown RBP11.55□□□□□ -0.56
PUS3-201ENST00000227474 TESK2Q96S53 571 aa11.55□□□□□ -0.56
PUS3-201ENST00000227474 COL17A1Q9UMD9 1497 aaPredicted RBP11.55□□□□□ -0.56
PUS3-201ENST00000227474 KANK1Q14678 1352 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms