RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 FRMPD1Q5SYB0 1578 aa8.87□□□□□ -0.99
AFP-201ENST00000226359 VPS8Q8N3P4 1428 aa8.87□□□□□ -0.99
AFP-201ENST00000226359 PLEKHH2Q8IVE3 1493 aa8.86□□□□□ -0.99
AFP-201ENST00000226359 LOC105371045A0A1W2PR82 267 aa8.86□□□□□ -0.99
AFP-201ENST00000226359 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.86□□□□□ -0.99
AFP-201ENST00000226359 PREX2Q70Z35 1606 aa8.86□□□□□ -0.99
AFP-201ENST00000226359 HOMEZQ8IX15 550 aa8.86□□□□□ -0.99
AFP-201ENST00000226359 EFCAB3Q8N7B9 438 aa8.86□□□□□ -0.99
AFP-201ENST00000226359 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
AFP-201ENST00000226359 ZNF777Q9ULD5 760 aaPredicted RBP8.86□□□□□ -0.99
AFP-201ENST00000226359 C9orf84Q5VXU9 1444 aa8.85□□□□□ -0.99
AFP-201ENST00000226359 RICTORQ6R327 1708 aa8.85□□□□□ -0.99
AFP-201ENST00000226359 HS3ST6Q96QI5 342 aa8.84□□□□□ -0.99
AFP-201ENST00000226359 LRRIQ1Q96JM4 1722 aa8.84□□□□□ -0.99
AFP-201ENST00000226359 RNF166Q96A37 237 aaPredicted RBP8.84□□□□□ -1
AFP-201ENST00000226359 ABCC1P33527 1531 aa8.83□□□□□ -1
AFP-201ENST00000226359 RYDENQ9NUL5 291 aaKnown RBP8.83□□□□□ -1
AFP-201ENST00000226359 ATP10AO60312 1499 aa8.83□□□□□ -1
AFP-201ENST00000226359 HECW2Q9P2P5 1572 aa8.83□□□□□ -1
AFP-201ENST00000226359 YEATS2Q9ULM3 1422 aa8.82□□□□□ -1
AFP-201ENST00000226359 GPATCH8Q9UKJ3 1502 aaKnown RBP8.82□□□□□ -1
AFP-201ENST00000226359 ESF1Q9H501 851 aaKnown RBP8.82□□□□□ -1
AFP-201ENST00000226359 ITSN2Q9NZM3 1697 aa8.81□□□□□ -1
AFP-201ENST00000226359 KDM5CP41229 1560 aa8.81□□□□□ -1
AFP-201ENST00000226359 AFAP1Q8N556 730 aa8.81□□□□□ -1
AFP-201ENST00000226359 PHF8Q9UPP1 1060 aa8.81□□□□□ -1
AFP-201ENST00000226359 SPAG9O60271 1321 aaKnown RBP8.81□□□□□ -1
AFP-201ENST00000226359 KIAA1107Q9UPP5 1409 aa8.81□□□□□ -1
AFP-201ENST00000226359 TIAM1Q13009 1591 aa8.8□□□□□ -1
AFP-201ENST00000226359 MLECQ14165 292 aa8.8□□□□□ -1
AFP-201ENST00000226359 TMEM106CQ9BVX2 250 aa8.8□□□□□ -1
AFP-201ENST00000226359 MLH3Q9UHC1 1453 aa8.8□□□□□ -1
AFP-201ENST00000226359 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
AFP-201ENST00000226359 SUPT6HQ7KZ85 1726 aaKnown RBP8.8□□□□□ -1
AFP-201ENST00000226359 MAP3K1Q13233 1512 aa8.79□□□□□ -1
AFP-201ENST00000226359 BCORL1Q5H9F3 1711 aa8.79□□□□□ -1
AFP-201ENST00000226359 PPP1R37O75864 691 aa8.79□□□□□ -1
AFP-201ENST00000226359 FBXO22Q8NEZ5 403 aa8.79□□□□□ -1
AFP-201ENST00000226359 TRAPPC8Q9Y2L5 1435 aa8.79□□□□□ -1
AFP-201ENST00000226359 NCOA2Q15596 1464 aa8.79□□□□□ -1
AFP-201ENST00000226359 CDC42BPAQ5VT25 1732 aa8.79□□□□□ -1
AFP-201ENST00000226359 CDC42BPBQ9Y5S2 1711 aa8.79□□□□□ -1
AFP-201ENST00000226359 FAM205CA6NFA0 338 aa8.78□□□□□ -1
AFP-201ENST00000226359 PTPRMP28827 1452 aa8.78□□□□□ -1
AFP-201ENST00000226359 CADPS2Q86UW7 1296 aa8.78□□□□□ -1
AFP-201ENST00000226359 SAMD9LQ8IVG5 1584 aa8.78□□□□□ -1
AFP-201ENST00000226359 LRRC9Q6ZRR7 1453 aa8.78□□□□□ -1
AFP-201ENST00000226359 ADAMTSL3P82987 1691 aa8.77□□□□□ -1.01
AFP-201ENST00000226359 MADDQ8WXG6 1647 aa8.77□□□□□ -1.01
AFP-201ENST00000226359 HNRNPMP52272 730 aaKnown RBP eCLIP8.77□□□□□ -1.01
AFP-201ENST00000226359 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
AFP-201ENST00000226359 REREQ9P2R6 1566 aa8.77□□□□□ -1.01
AFP-201ENST00000226359 DIP2CQ9Y2E4 1556 aa8.77□□□□□ -1.01
AFP-201ENST00000226359 ATP7AQ04656 1500 aa8.75□□□□□ -1.01
AFP-201ENST00000226359 ARHGEF12Q9NZN5 1544 aa8.75□□□□□ -1.01
AFP-201ENST00000226359 CAMSAP2Q08AD1 1489 aa8.75□□□□□ -1.01
AFP-201ENST00000226359 CCDC141Q6ZP82 1450 aa8.75□□□□□ -1.01
AFP-201ENST00000226359 RIMS1Q86UR5 1692 aaKnown RBP8.75□□□□□ -1.01
AFP-201ENST00000226359 AGLP35573 1532 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 SOX12O15370 315 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 TSPY4P0CV99 314 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 TSPY10P0CW01 314 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 NLRP6P59044 892 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 IRX5P78411 483 aaPredicted RBP8.74□□□□□ -1.01
AFP-201ENST00000226359 MS4A4AQ96JQ5 239 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 CNTLNQ9NXG0 1405 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 ABCA6Q8N139 1617 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 GOLGA2Q08379 1002 aa8.74□□□□□ -1.01
AFP-201ENST00000226359 POTEB3A0JP26 581 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 POTEBQ6S5H4 581 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 OCEL1Q9H607 264 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 RTEL1-TNFRSF6BF6WH68 1400 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 MYOM3Q5VTT5 1437 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 MIA2Q96PC5 1412 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 A2MP01023 1474 aa8.73□□□□□ -1.01
AFP-201ENST00000226359 FER1L4A9Z1Z3 1794 aa8.72□□□□□ -1.01
AFP-201ENST00000226359 ZNF644Q9H582 1327 aaPredicted RBP8.72□□□□□ -1.01
AFP-201ENST00000226359 INO80Q9ULG1 1556 aaPredicted RBP8.71□□□□□ -1.01
AFP-201ENST00000226359 MBD5Q9P267 1494 aa8.7□□□□□ -1.02
AFP-201ENST00000226359 ARHGEF5Q12774 1597 aa8.7□□□□□ -1.02
AFP-201ENST00000226359 KIDINS220Q9ULH0 1771 aa8.7□□□□□ -1.02
AFP-201ENST00000226359 KANK4Q5T7N3 995 aaPredicted RBP8.7□□□□□ -1.02
AFP-201ENST00000226359 MKRN3Q13064 507 aaKnown RBP8.69□□□□□ -1.02
AFP-201ENST00000226359 UHRF1BP1Q6BDS2 1440 aa8.69□□□□□ -1.02
AFP-201ENST00000226359 DHX29Q7Z478 1369 aaKnown RBP8.68□□□□□ -1.02
AFP-201ENST00000226359 BRPF1P55201 1214 aaPredicted RBP8.68□□□□□ -1.02
AFP-201ENST00000226359 ADGBQ8N7X0 1667 aa8.68□□□□□ -1.02
AFP-201ENST00000226359 PTGER2P43116 358 aa8.68□□□□□ -1.02
AFP-201ENST00000226359 GGT6Q6P531 493 aa8.68□□□□□ -1.02
AFP-201ENST00000226359 LMOD2Q6P5Q4 547 aa8.68□□□□□ -1.02
AFP-201ENST00000226359 PLXNC1O60486 1568 aa8.67□□□□□ -1.02
AFP-201ENST00000226359 FAM135AQ9P2D6 1515 aa8.67□□□□□ -1.02
AFP-201ENST00000226359 SIGLEC1Q9BZZ2 1709 aa8.67□□□□□ -1.02
AFP-201ENST00000226359 FGD6Q6ZV73 1430 aa8.66□□□□□ -1.02
AFP-201ENST00000226359 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.66□□□□□ -1.022e-6■■■■□ 23.4
AFP-201ENST00000226359 KIF3BO15066 747 aa8.66□□□□□ -1.02
AFP-201ENST00000226359 LMTK3Q96Q04 1460 aa8.65□□□□□ -1.02
AFP-201ENST00000226359 SHANK2Q9UPX8 1470 aa8.65□□□□□ -1.02
AFP-201ENST00000226359 CEBPAP49715 358 aaPredicted RBP8.65□□□□□ -1.02
AFP-201ENST00000226359 C3orf67Q6ZVT6 689 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms