RNA–Protein interactions for RNA: ENST00000225842.3

CCL1-201, Transcript of C-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL1, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1-201ENST00000225842 TRIM26Q12899 539 aaPredicted RBP11.82□□□□□ -0.52
CCL1-201ENST00000225842 COL17A1Q9UMD9 1497 aaPredicted RBP11.82□□□□□ -0.52
CCL1-201ENST00000225842 CLCN1P35523 988 aa11.81□□□□□ -0.52
CCL1-201ENST00000225842 SH3D19Q5HYK7 790 aa11.81□□□□□ -0.52
CCL1-201ENST00000225842 PHOX2BQ99453 314 aa11.8□□□□□ -0.52
CCL1-201ENST00000225842 TMUB1Q9BVT8 246 aa11.8□□□□□ -0.52
CCL1-201ENST00000225842 ANO8Q9HCE9 1232 aaPredicted RBP11.8□□□□□ -0.52
CCL1-201ENST00000225842 GPCPD1Q9NPB8 672 aa11.8□□□□□ -0.52
CCL1-201ENST00000225842 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
CCL1-201ENST00000225842 PHF14O94880 888 aa11.78□□□□□ -0.52
CCL1-201ENST00000225842 SSTR3P32745 418 aaPredicted RBP11.78□□□□□ -0.52
CCL1-201ENST00000225842 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
CCL1-201ENST00000225842 PELP1Q8IZL8 1130 aaKnown RBP11.78□□□□□ -0.52
CCL1-201ENST00000225842 EPAS1Q99814 870 aa11.78□□□□□ -0.52
CCL1-201ENST00000225842 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
CCL1-201ENST00000225842 A6NJR5 290 aa11.77□□□□□ -0.53
CCL1-201ENST00000225842 TRAK2O60296 914 aa11.77□□□□□ -0.53
CCL1-201ENST00000225842 MCM6Q14566 821 aa11.77□□□□□ -0.53
CCL1-201ENST00000225842 TTBK1Q5TCY1 1321 aaPredicted RBP11.77□□□□□ -0.53
CCL1-201ENST00000225842 TOP2BQ02880 1626 aa11.76□□□□□ -0.53
CCL1-201ENST00000225842 FAM161AQ3B820 660 aa11.76□□□□□ -0.53
CCL1-201ENST00000225842 NLRP7Q8WX94 980 aa11.75□□□□□ -0.53
CCL1-201ENST00000225842 BEGAINQ9BUH8 593 aa11.75□□□□□ -0.53
CCL1-201ENST00000225842 PCDHGA10Q9Y5H3 936 aa11.75□□□□□ -0.53
CCL1-201ENST00000225842 ASXL2Q76L83 1435 aa11.75□□□□□ -0.53
CCL1-201ENST00000225842 PLB1Q6P1J6 1458 aa11.75□□□□□ -0.53
CCL1-201ENST00000225842 SKIV2LQ15477 1246 aaKnown RBP11.74□□□□□ -0.53
CCL1-201ENST00000225842 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
CCL1-201ENST00000225842 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
CCL1-201ENST00000225842 SLC34A2O95436 690 aa11.73□□□□□ -0.53
CCL1-201ENST00000225842 HRCP23327 699 aa11.73□□□□□ -0.53
CCL1-201ENST00000225842 PROCA1Q8NCQ7 364 aaPredicted RBP11.73□□□□□ -0.53
CCL1-201ENST00000225842 SLAIN1Q8ND83 568 aa11.73□□□□□ -0.53
CCL1-201ENST00000225842 PTPRGP23470 1445 aa11.72□□□□□ -0.53
CCL1-201ENST00000225842 CERKQ8TCT0 537 aa11.72□□□□□ -0.53
CCL1-201ENST00000225842 POLR3EQ9NVU0 708 aa11.72□□□□□ -0.53
CCL1-201ENST00000225842 GLI2P10070 1586 aa11.71□□□□□ -0.53
CCL1-201ENST00000225842 ERICH3Q5RHP9 1530 aa11.71□□□□□ -0.53
CCL1-201ENST00000225842 TEX14Q8IWB6 1497 aa11.71□□□□□ -0.53
CCL1-201ENST00000225842 TYW1BQ6NUM6 668 aa11.71□□□□□ -0.53
CCL1-201ENST00000225842 POTEFA5A3E0 1075 aa11.7□□□□□ -0.54
CCL1-201ENST00000225842 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
CCL1-201ENST00000225842 PPRC1Q5VV67 1664 aaKnown RBP11.69□□□□□ -0.54
CCL1-201ENST00000225842 METTL3Q86U44 580 aaKnown RBP11.69□□□□□ -0.54
CCL1-201ENST00000225842 DCBLD2Q96PD2 775 aa11.69□□□□□ -0.54
CCL1-201ENST00000225842 ABCC2Q92887 1545 aa11.69□□□□□ -0.54
CCL1-201ENST00000225842 POM121Q96HA1 1249 aa11.68□□□□□ -0.54
CCL1-201ENST00000225842 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
CCL1-201ENST00000225842 GABBR2O75899 941 aa11.67□□□□□ -0.54
CCL1-201ENST00000225842 PADI6Q6TGC4 694 aa11.67□□□□□ -0.54
CCL1-201ENST00000225842 PROSER2Q86WR7 435 aaPredicted RBP11.67□□□□□ -0.54
CCL1-201ENST00000225842 SLC39A7Q92504 469 aa11.67□□□□□ -0.54
CCL1-201ENST00000225842 ZNF777Q9ULD5 760 aaPredicted RBP11.67□□□□□ -0.54
CCL1-201ENST00000225842 PCDHGA4Q9Y5G9 962 aa11.67□□□□□ -0.54
CCL1-201ENST00000225842 OATP04181 439 aa11.66□□□□□ -0.54
CCL1-201ENST00000225842 MYSM1Q5VVJ2 828 aa11.65□□□□□ -0.54
CCL1-201ENST00000225842 FBXW7Q969H0 707 aa11.65□□□□□ -0.54
CCL1-201ENST00000225842 EPRSP07814 1512 aaKnown RBP11.65□□□□□ -0.55
CCL1-201ENST00000225842 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.55
CCL1-201ENST00000225842 PTPRMP28827 1452 aa11.64□□□□□ -0.55
CCL1-201ENST00000225842 ADGRG1Q9Y653 693 aa11.64□□□□□ -0.55
CCL1-201ENST00000225842 RAD21O60216 631 aa11.63□□□□□ -0.55
CCL1-201ENST00000225842 PXYLP1Q8TE99 480 aa11.63□□□□□ -0.55
CCL1-201ENST00000225842 C7P10643 843 aa11.62□□□□□ -0.55
CCL1-201ENST00000225842 PDIA4P13667 645 aaKnown RBP11.62□□□□□ -0.55
CCL1-201ENST00000225842 METRNQ9UJH8 293 aa11.62□□□□□ -0.55
CCL1-201ENST00000225842 TNIKQ9UKE5 1360 aa11.62□□□□□ -0.55
CCL1-201ENST00000225842 CLK2P49760 499 aaKnown RBP11.61□□□□□ -0.55
CCL1-201ENST00000225842 HSPA2P54652 639 aa11.61□□□□□ -0.55
CCL1-201ENST00000225842 C6orf132Q5T0Z8 1188 aa11.61□□□□□ -0.55
CCL1-201ENST00000225842 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.61□□□□□ -0.55
CCL1-201ENST00000225842 PCF11O94913 1555 aaKnown RBP11.6□□□□□ -0.55
CCL1-201ENST00000225842 FOSBP53539 338 aa11.59□□□□□ -0.55
CCL1-201ENST00000225842 FNBP4Q8N3X1 1017 aaPredicted RBP11.59□□□□□ -0.55
CCL1-201ENST00000225842 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
CCL1-201ENST00000225842 MAP3K4Q9Y6R4 1608 aa11.59□□□□□ -0.55
CCL1-201ENST00000225842 CARMIL2Q6F5E8 1435 aa11.59□□□□□ -0.55
CCL1-201ENST00000225842 UACAQ9BZF9 1416 aa11.58□□□□□ -0.56
CCL1-201ENST00000225842 SPATA31D1Q6ZQQ2 1576 aa11.58□□□□□ -0.56
CCL1-201ENST00000225842 UHRF1BP1LA0JNW5 1464 aa11.57□□□□□ -0.56
CCL1-201ENST00000225842 SPDYE5A6NIY4 337 aa11.57□□□□□ -0.56
CCL1-201ENST00000225842 ZNF454Q8N9F8 522 aa11.57□□□□□ -0.56
CCL1-201ENST00000225842 SNRKQ9NRH2 765 aa11.57□□□□□ -0.56
CCL1-201ENST00000225842 RFC5P40937 340 aa11.56□□□□□ -0.56
CCL1-201ENST00000225842 ZDHHC16Q969W1 377 aa11.56□□□□□ -0.56
CCL1-201ENST00000225842 CCDC97Q96F63 343 aaPredicted RBP11.56□□□□□ -0.56
CCL1-201ENST00000225842 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.56□□□□□ -0.56
CCL1-201ENST00000225842 COG6Q9Y2V7 657 aa11.56□□□□□ -0.56
CCL1-201ENST00000225842 CD109Q6YHK3 1445 aa11.55□□□□□ -0.56
CCL1-201ENST00000225842 FBXO31Q5XUX0 539 aaPredicted RBP11.55□□□□□ -0.56
CCL1-201ENST00000225842 TTC13Q8NBP0 860 aa11.55□□□□□ -0.56
CCL1-201ENST00000225842 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
CCL1-201ENST00000225842 KIF21BO75037 1637 aa11.54□□□□□ -0.56
CCL1-201ENST00000225842 LIMD1Q9UGP4 676 aa11.54□□□□□ -0.56
CCL1-201ENST00000225842 RANGAP1P46060 587 aaPredicted RBP11.53□□□□□ -0.56
CCL1-201ENST00000225842 RBM46Q8TBY0 533 aaKnown RBP11.53□□□□□ -0.56
CCL1-201ENST00000225842 KCNH8Q96L42 1107 aa11.53□□□□□ -0.56
CCL1-201ENST00000225842 KDM5BQ9UGL1 1544 aa11.53□□□□□ -0.56
CCL1-201ENST00000225842 ZBTB7CA1YPR0 619 aa11.52□□□□□ -0.57
CCL1-201ENST00000225842 PRSS12P56730 875 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms