RNA–Protein interactions for RNA: ENST00000225719.8

CPD-201, Transcript of carboxypeptidase D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPD, Length 9,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPD-201ENST00000225719 HSP90AB3PQ58FF7 597 aa18.71■□□□□ 0.59
CPD-201ENST00000225719 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
CPD-201ENST00000225719 MARCH6O60337 910 aa18.7■□□□□ 0.58
CPD-201ENST00000225719 ERLIN1O75477 346 aa18.7■□□□□ 0.58
CPD-201ENST00000225719 TXLNBQ8N3L3 684 aa18.7■□□□□ 0.58
CPD-201ENST00000225719 IQCEQ6IPM2 695 aa18.7■□□□□ 0.58
CPD-201ENST00000225719 SMARCA2P51531 1590 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 E9PSI1 815 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 PRDM2Q13029 1718 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 DDX11Q96FC9 970 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 SYNE3Q6ZMZ3 975 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 PKD2Q13563 968 aa18.69■□□□□ 0.58
CPD-201ENST00000225719 RRP1P56182 461 aaKnown RBP18.68■□□□□ 0.58
CPD-201ENST00000225719 TRIM29Q14134 588 aa18.68■□□□□ 0.58
CPD-201ENST00000225719 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.68■□□□□ 0.58
CPD-201ENST00000225719 CUX2O14529 1486 aa18.68■□□□□ 0.58
CPD-201ENST00000225719 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
CPD-201ENST00000225719 ZKSCAN1P17029 563 aaPredicted RBP18.67■□□□□ 0.58
CPD-201ENST00000225719 RABEP1Q15276 862 aa18.67■□□□□ 0.58
CPD-201ENST00000225719 CALCOCO1Q9P1Z2 691 aa18.67■□□□□ 0.58
CPD-201ENST00000225719 GIMAP7Q8NHV1 300 aa18.66■□□□□ 0.58
CPD-201ENST00000225719 ERLIN2O94905 339 aa18.66■□□□□ 0.58
CPD-201ENST00000225719 UBE2Q2Q8WVN8 375 aa18.65■□□□□ 0.58
CPD-201ENST00000225719 NUP155O75694 1391 aa18.65■□□□□ 0.58
CPD-201ENST00000225719 RSPH4AQ5TD94 716 aa18.64■□□□□ 0.57
CPD-201ENST00000225719 SLC4A10Q6U841 1118 aa18.64■□□□□ 0.57
CPD-201ENST00000225719 CCDC73Q6ZRK6 1079 aa18.64■□□□□ 0.57
CPD-201ENST00000225719 SOX12O15370 315 aa18.64■□□□□ 0.57
CPD-201ENST00000225719 OLFM4Q6UX06 510 aa18.63■□□□□ 0.57
CPD-201ENST00000225719 CT47B1P0C2W7 299 aaPredicted RBP18.63■□□□□ 0.57
CPD-201ENST00000225719 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
CPD-201ENST00000225719 ANKRD45Q5TZF3 282 aa18.62■□□□□ 0.57
CPD-201ENST00000225719 SMARCE1Q969G3 411 aa18.62■□□□□ 0.57
CPD-201ENST00000225719 PCMTD1Q96MG8 357 aaPredicted RBP18.62■□□□□ 0.57
CPD-201ENST00000225719 ZKSCAN2Q63HK3 967 aa18.62■□□□□ 0.57
CPD-201ENST00000225719 AMOTL1Q8IY63 956 aa18.62■□□□□ 0.57
CPD-201ENST00000225719 BICD2Q8TD16 824 aa18.62■□□□□ 0.57
CPD-201ENST00000225719 DDX19BQ9UMR2 479 aa18.62■□□□□ 0.57
CPD-201ENST00000225719 AXDND1Q5T1B0 1012 aaPredicted RBP18.62■□□□□ 0.57
CPD-201ENST00000225719 ANKRD18AQ8IVF6 992 aa18.61■□□□□ 0.57
CPD-201ENST00000225719 KIF2AO00139 706 aaPredicted RBP18.61■□□□□ 0.57
CPD-201ENST00000225719 RILPL2Q969X0 211 aa18.61■□□□□ 0.57
CPD-201ENST00000225719 NOL8Q76FK4 1167 aaKnown RBP18.6■□□□□ 0.57
CPD-201ENST00000225719 MCM2P49736 904 aa18.6■□□□□ 0.57
CPD-201ENST00000225719 MCTP1Q6DN14 999 aa18.6■□□□□ 0.57
CPD-201ENST00000225719 PDCL3Q9H2J4 239 aa18.6■□□□□ 0.57
CPD-201ENST00000225719 G3V3G9 751 aa18.59■□□□□ 0.57
CPD-201ENST00000225719 PAK3O75914 559 aaPredicted RBP18.59■□□□□ 0.57
CPD-201ENST00000225719 DCAF8Q5TAQ9 597 aa18.59■□□□□ 0.57
CPD-201ENST00000225719 VPS53Q5VIR6 699 aa18.59■□□□□ 0.57
CPD-201ENST00000225719 TSPY26PQ9H489 355 aa18.59■□□□□ 0.57
CPD-201ENST00000225719 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.59■□□□□ 0.57
CPD-201ENST00000225719 LUC7LQ9NQ29 371 aaKnown RBP18.59■□□□□ 0.57
CPD-201ENST00000225719 TCEAL9Q9UHQ7 104 aa18.59■□□□□ 0.57
CPD-201ENST00000225719 ABCC8Q09428 1581 aa18.59■□□□□ 0.57
CPD-201ENST00000225719 PIP4K2AP48426 406 aaPredicted RBP18.59■□□□□ 0.57
CPD-201ENST00000225719 INTS3Q68E01 1043 aaKnown RBP18.58■□□□□ 0.57
CPD-201ENST00000225719 CCDC112Q8NEF3 446 aa18.58■□□□□ 0.57
CPD-201ENST00000225719 UQCRHLA0A096LP55 91 aa18.58■□□□□ 0.56
CPD-201ENST00000225719 UQCRHP07919 91 aa18.58■□□□□ 0.56
CPD-201ENST00000225719 PDCP20941 246 aa18.57■□□□□ 0.56
CPD-201ENST00000225719 PDE4CQ08493 712 aa18.57■□□□□ 0.56
CPD-201ENST00000225719 STK26Q9P289 416 aa18.57■□□□□ 0.56
CPD-201ENST00000225719 SAFB2Q14151 953 aaKnown RBP eCLIP18.57■□□□□ 0.56
CPD-201ENST00000225719 ANO8Q9HCE9 1232 aaPredicted RBP18.57■□□□□ 0.56
CPD-201ENST00000225719 TRAK2O60296 914 aa18.56■□□□□ 0.56
CPD-201ENST00000225719 FRAT2O75474 233 aaPredicted RBP18.56■□□□□ 0.56
CPD-201ENST00000225719 TOMM22Q9NS69 142 aa18.56■□□□□ 0.56
CPD-201ENST00000225719 PDIA4P13667 645 aaKnown RBP18.55■□□□□ 0.56
CPD-201ENST00000225719 FOXD4L5Q5VV16 416 aaPredicted RBP18.55■□□□□ 0.56
CPD-201ENST00000225719 FOXD4L4Q8WXT5 416 aaPredicted RBP18.55■□□□□ 0.56
CPD-201ENST00000225719 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
CPD-201ENST00000225719 CSB-PGBD3P0DP91 1061 aa18.55■□□□□ 0.56
CPD-201ENST00000225719 MCM3P25205 808 aa18.55■□□□□ 0.56
CPD-201ENST00000225719 NAP1L1P55209 391 aaKnown RBP18.55■□□□□ 0.56
CPD-201ENST00000225719 TRDNQ13061 729 aa18.55■□□□□ 0.56
CPD-201ENST00000225719 CPLX1O14810 134 aa18.54■□□□□ 0.56
CPD-201ENST00000225719 TRIM5Q9C035 493 aa18.54■□□□□ 0.56
CPD-201ENST00000225719 CCDC144AA2RUR9 1427 aa18.54■□□□□ 0.56
CPD-201ENST00000225719 EZRP15311 586 aaKnown RBP18.53■□□□□ 0.56
CPD-201ENST00000225719 ODF2Q5BJF6 829 aa18.53■□□□□ 0.56
CPD-201ENST00000225719 CT47A1Q5JQC4 288 aaPredicted RBP18.53■□□□□ 0.56
CPD-201ENST00000225719 SMC3Q9UQE7 1217 aa18.53■□□□□ 0.56
CPD-201ENST00000225719 WWC1Q8IX03 1113 aa18.53■□□□□ 0.56
CPD-201ENST00000225719 NOL10Q9BSC4 688 aaKnown RBP18.53■□□□□ 0.56
CPD-201ENST00000225719 PLCD4Q9BRC7 762 aa18.52■□□□□ 0.56
CPD-201ENST00000225719 SAFBQ15424 915 aaKnown RBP eCLIP18.52■□□□□ 0.56
CPD-201ENST00000225719 C22orf23Q9BZE7 217 aa18.52■□□□□ 0.56
CPD-201ENST00000225719 ZNF330Q9Y3S2 320 aaPredicted RBP18.52■□□□□ 0.56
CPD-201ENST00000225719 GOLGA6L10A0A0M3HER8 536 aa18.52■□□□□ 0.56
CPD-201ENST00000225719 CUX1P39880 1505 aa18.52■□□□□ 0.55
CPD-201ENST00000225719 AMPHP49418 695 aa18.51■□□□□ 0.55
CPD-201ENST00000225719 WIZO95785 1651 aa18.51■□□□□ 0.55
CPD-201ENST00000225719 NINLQ9Y2I6 1382 aa18.51■□□□□ 0.55
CPD-201ENST00000225719 POLR3GO15318 223 aaPredicted RBP18.51■□□□□ 0.55
CPD-201ENST00000225719 GBP3Q9H0R5 595 aa18.51■□□□□ 0.55
CPD-201ENST00000225719 EPS15P42566 896 aa18.51■□□□□ 0.55
CPD-201ENST00000225719 CCDC146Q8IYE0 955 aa18.5■□□□□ 0.55
CPD-201ENST00000225719 SLC26A8Q96RN1 970 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms