RNA–Protein interactions for RNA: ENST00000217957.9

VSIG1-201, Transcript of V-set and immunoglobulin domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VSIG1, Length 2,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG1-201ENST00000217957 PEX14O75381 377 aa12.03□□□□□ -0.48
VSIG1-201ENST00000217957 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
VSIG1-201ENST00000217957 GPATCH3Q96I76 525 aa12.03□□□□□ -0.48
VSIG1-201ENST00000217957 DNAJC14Q6Y2X3 702 aaPredicted RBP12.03□□□□□ -0.48
VSIG1-201ENST00000217957 SPDYE2BA6NHP3 402 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 SPDYE5A6NIY4 337 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 TBC1D12O60347 775 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 SPDYE6P0CI01 402 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 SPDYE2Q495Y8 402 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 EFCAB3Q8N7B9 438 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 CEP164Q9UPV0 1460 aa12.02□□□□□ -0.49
VSIG1-201ENST00000217957 VRTNQ9H8Y1 702 aa12.01□□□□□ -0.49
VSIG1-201ENST00000217957 EMILIN3Q9NT22 766 aa12.01□□□□□ -0.49
VSIG1-201ENST00000217957 TMEM88BA6NKF7 163 aa12.01□□□□□ -0.49
VSIG1-201ENST00000217957 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.01□□□□□ -0.49
VSIG1-201ENST00000217957 NAALADL2Q58DX5 795 aa12□□□□□ -0.49
VSIG1-201ENST00000217957 SHROOM2Q13796 1616 aa12□□□□□ -0.49
VSIG1-201ENST00000217957 CRISPLD2Q9H0B8 497 aa12□□□□□ -0.49
VSIG1-201ENST00000217957 USTQ9Y2C2 406 aa12□□□□□ -0.49
VSIG1-201ENST00000217957 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
VSIG1-201ENST00000217957 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
VSIG1-201ENST00000217957 SRPK2P78362 688 aaKnown RBP11.99□□□□□ -0.49
VSIG1-201ENST00000217957 GLI2P10070 1586 aa11.98□□□□□ -0.49
VSIG1-201ENST00000217957 PATL2C9JE40 543 aaKnown RBP11.97□□□□□ -0.49
VSIG1-201ENST00000217957 FGD1P98174 961 aa11.97□□□□□ -0.49
VSIG1-201ENST00000217957 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
VSIG1-201ENST00000217957 PHOX2BQ99453 314 aa11.97□□□□□ -0.49
VSIG1-201ENST00000217957 MNX1P50219 401 aaPredicted RBP11.97□□□□□ -0.49
VSIG1-201ENST00000217957 DPH6Q7L8W6 267 aa11.97□□□□□ -0.49
VSIG1-201ENST00000217957 GNPATO15228 680 aa11.97□□□□□ -0.49
VSIG1-201ENST00000217957 BEGAINQ9BUH8 593 aa11.97□□□□□ -0.49
VSIG1-201ENST00000217957 MDM2Q00987 491 aaPredicted RBP11.96□□□□□ -0.49
VSIG1-201ENST00000217957 FAM50AQ14320 339 aaKnown RBP11.96□□□□□ -0.49
VSIG1-201ENST00000217957 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
VSIG1-201ENST00000217957 SUGT1Q9Y2Z0 365 aa11.96□□□□□ -0.49
VSIG1-201ENST00000217957 MFSD10Q14728 455 aa11.96□□□□□ -0.5
VSIG1-201ENST00000217957 RFC5P40937 340 aa11.95□□□□□ -0.5
VSIG1-201ENST00000217957 ZC3H4Q9UPT8 1303 aaKnown RBP11.95□□□□□ -0.5
VSIG1-201ENST00000217957 EXOC8Q8IYI6 725 aa11.95□□□□□ -0.5
VSIG1-201ENST00000217957 LMOD1P29536 600 aaPredicted RBP11.94□□□□□ -0.5
VSIG1-201ENST00000217957 FOXD4L6Q3SYB3 417 aaPredicted RBP11.94□□□□□ -0.5
VSIG1-201ENST00000217957 FOXD4L3Q6VB84 417 aaPredicted RBP11.94□□□□□ -0.5
VSIG1-201ENST00000217957 SPATA31D1Q6ZQQ2 1576 aa11.94□□□□□ -0.5
VSIG1-201ENST00000217957 CDCA7Q9BWT1 371 aaPredicted RBP11.94□□□□□ -0.5
VSIG1-201ENST00000217957 NCLP19338 710 aaKnown RBP11.93□□□□□ -0.5
VSIG1-201ENST00000217957 CENPBP07199 599 aaPredicted RBP11.93□□□□□ -0.5
VSIG1-201ENST00000217957 CABP2Q9NPB3 220 aa11.93□□□□□ -0.5
VSIG1-201ENST00000217957 FARP1Q9Y4F1 1045 aaPredicted RBP11.93□□□□□ -0.5
VSIG1-201ENST00000217957 PDE4AP27815 886 aa11.92□□□□□ -0.5
VSIG1-201ENST00000217957 UBXN4Q92575 508 aa11.92□□□□□ -0.5
VSIG1-201ENST00000217957 SERPINB4P48594 390 aa11.91□□□□□ -0.5
VSIG1-201ENST00000217957 TSNAXIP1Q2TAA8 658 aa11.91□□□□□ -0.5
VSIG1-201ENST00000217957 FAM161AQ3B820 660 aa11.91□□□□□ -0.5
VSIG1-201ENST00000217957 MAP4K4O95819 1239 aaPredicted RBP11.91□□□□□ -0.5
VSIG1-201ENST00000217957 RECKO95980 971 aa11.91□□□□□ -0.5
VSIG1-201ENST00000217957 MROH2BQ7Z745 1585 aa11.9□□□□□ -0.5
VSIG1-201ENST00000217957 EIF4G3O43432 1585 aaKnown RBP11.89□□□□□ -0.51
VSIG1-201ENST00000217957 TPD52L2O43399 206 aaKnown RBP11.89□□□□□ -0.51
VSIG1-201ENST00000217957 ZC3H6P61129 1189 aaKnown RBP11.89□□□□□ -0.51
VSIG1-201ENST00000217957 CSPP1Q1MSJ5 1256 aa11.89□□□□□ -0.51
VSIG1-201ENST00000217957 MYSM1Q5VVJ2 828 aa11.89□□□□□ -0.51
VSIG1-201ENST00000217957 HECW2Q9P2P5 1572 aa11.89□□□□□ -0.51
VSIG1-201ENST00000217957 PKNOX2Q96KN3 472 aa11.89□□□□□ -0.51
VSIG1-201ENST00000217957 ZBTB12Q9Y330 459 aaPredicted RBP11.88□□□□□ -0.51
VSIG1-201ENST00000217957 PALM3A6NDB9 673 aaPredicted RBP11.88□□□□□ -0.51
VSIG1-201ENST00000217957 TSR1Q2NL82 804 aaKnown RBP11.88□□□□□ -0.51
VSIG1-201ENST00000217957 EVI5LQ96CN4 794 aa11.88□□□□□ -0.51
VSIG1-201ENST00000217957 TBC1D2Q9BYX2 928 aa11.88□□□□□ -0.51
VSIG1-201ENST00000217957 PPP1R12CQ9BZL4 782 aa11.88□□□□□ -0.51
VSIG1-201ENST00000217957 PDAP1Q13442 181 aaKnown RBP11.88□□□□□ -0.51
VSIG1-201ENST00000217957 TEX2Q8IWB9 1127 aa11.87□□□□□ -0.51
VSIG1-201ENST00000217957 ZEB1P37275 1124 aaPredicted RBP11.86□□□□□ -0.51
VSIG1-201ENST00000217957 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
VSIG1-201ENST00000217957 MYH16Q9H6N6 1097 aa11.86□□□□□ -0.51
VSIG1-201ENST00000217957 PDIA6Q15084 440 aa11.86□□□□□ -0.51
VSIG1-201ENST00000217957 PHLDB3Q6NSJ2 640 aa11.86□□□□□ -0.51
VSIG1-201ENST00000217957 TARBP1Q13395 1621 aaKnown RBP11.86□□□□□ -0.51
VSIG1-201ENST00000217957 KIAA0586Q9BVV6 1533 aa11.86□□□□□ -0.51
VSIG1-201ENST00000217957 MAGI1Q96QZ7 1491 aaPredicted RBP11.85□□□□□ -0.51
VSIG1-201ENST00000217957 RBM46Q8TBY0 533 aaKnown RBP11.85□□□□□ -0.51
VSIG1-201ENST00000217957 UCN2Q96RP3 112 aa11.85□□□□□ -0.51
VSIG1-201ENST00000217957 CFTRP13569 1480 aa11.85□□□□□ -0.51
VSIG1-201ENST00000217957 SBNO2Q9Y2G9 1366 aa11.85□□□□□ -0.51
VSIG1-201ENST00000217957 MS4A4AQ96JQ5 239 aa11.85□□□□□ -0.51
VSIG1-201ENST00000217957 SSTR3P32745 418 aaPredicted RBP11.84□□□□□ -0.51
VSIG1-201ENST00000217957 CANXP27824 592 aaKnown RBP11.84□□□□□ -0.51
VSIG1-201ENST00000217957 PRIM1P49642 420 aaKnown RBP11.84□□□□□ -0.51
VSIG1-201ENST00000217957 PSEN1P49768 467 aa11.84□□□□□ -0.51
VSIG1-201ENST00000217957 SGSM3Q96HU1 749 aa11.84□□□□□ -0.51
VSIG1-201ENST00000217957 TSPYL2Q9H2G4 693 aaPredicted RBP11.84□□□□□ -0.51
VSIG1-201ENST00000217957 GABBR1Q9UBS5 961 aa11.84□□□□□ -0.51
VSIG1-201ENST00000217957 VAC14Q08AM6 782 aa11.83□□□□□ -0.52
VSIG1-201ENST00000217957 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
VSIG1-201ENST00000217957 LIMD1Q9UGP4 676 aa11.83□□□□□ -0.52
VSIG1-201ENST00000217957 IQSEC3Q9UPP2 1182 aaPredicted RBP11.83□□□□□ -0.52
VSIG1-201ENST00000217957 PARNO95453 639 aaKnown RBP11.83□□□□□ -0.52
VSIG1-201ENST00000217957 APBB1IPQ7Z5R6 666 aaPredicted RBP11.82□□□□□ -0.52
VSIG1-201ENST00000217957 DHX38Q92620 1227 aaKnown RBP11.82□□□□□ -0.52
VSIG1-201ENST00000217957 DDX12PQ92771 950 aa11.82□□□□□ -0.52
VSIG1-201ENST00000217957 ANKRD33BA6NCL7 494 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms