RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 TRPM2O94759 1503 aa12.03□□□□□ -0.48
MTHFD1-201ENST00000216605 PTPRTO14522 1441 aa12.03□□□□□ -0.48
MTHFD1-201ENST00000216605 SENP3-EIF4A1A0A087X0R7 540 aa12.03□□□□□ -0.48
MTHFD1-201ENST00000216605 ADGRF5Q8IZF2 1346 aa12.03□□□□□ -0.48
MTHFD1-201ENST00000216605 BCORL1Q5H9F3 1711 aa12.02□□□□□ -0.49
MTHFD1-201ENST00000216605 EIF2AK4Q9P2K8 1649 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-201ENST00000216605 CC2D1BQ5T0F9 858 aaKnown RBP12.02□□□□□ -0.49
MTHFD1-201ENST00000216605 SPHKAPQ2M3C7 1700 aa12.01□□□□□ -0.49
MTHFD1-201ENST00000216605 PRDM15P57071 1507 aaPredicted RBP12.01□□□□□ -0.49
MTHFD1-201ENST00000216605 DEPDC5O75140 1603 aa12.01□□□□□ -0.49
MTHFD1-201ENST00000216605 CLTCL1P53675 1640 aa12.01□□□□□ -0.49
MTHFD1-201ENST00000216605 NPATQ14207 1427 aa12□□□□□ -0.49
MTHFD1-201ENST00000216605 PANK3Q9H999 370 aa12□□□□□ -0.49
MTHFD1-201ENST00000216605 RBM19Q9Y4C8 960 aaKnown RBP12□□□□□ -0.49
MTHFD1-201ENST00000216605 TRAK1Q9UPV9 953 aa12□□□□□ -0.49
MTHFD1-201ENST00000216605 TRPM1Q7Z4N2 1603 aa12□□□□□ -0.49
MTHFD1-201ENST00000216605 CEP152O94986 1710 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 TRHP20396 242 aaPredicted RBP11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 CDCA8Q53HL2 280 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 EFCAB6Q5THR3 1501 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 TESK2Q96S53 571 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 GPRASP1Q5JY77 1395 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 DISP3Q9P2K9 1392 aa11.99□□□□□ -0.49
MTHFD1-201ENST00000216605 TMEM132EQ6IEE7 984 aa11.98□□□□□ -0.49
MTHFD1-201ENST00000216605 EIF3AQ14152 1382 aaKnown RBP11.98□□□□□ -0.49
MTHFD1-201ENST00000216605 MROH1Q8NDA8 1641 aa11.98□□□□□ -0.49
MTHFD1-201ENST00000216605 IDI1Q13907 227 aa11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 FBXO31Q5XUX0 539 aaPredicted RBP11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 NOS1P29475 1434 aa11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 VWDEQ8N2E2 1590 aa11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 KNSTRNQ9Y448 316 aa11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 FRMPD1Q5SYB0 1578 aa11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 PPRC1Q5VV67 1664 aaKnown RBP11.97□□□□□ -0.49
MTHFD1-201ENST00000216605 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
MTHFD1-201ENST00000216605 PDIA4P13667 645 aaKnown RBP11.96□□□□□ -0.49
MTHFD1-201ENST00000216605 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.5
MTHFD1-201ENST00000216605 DIP2BQ9P265 1576 aa11.96□□□□□ -0.5
MTHFD1-201ENST00000216605 RALBP1Q15311 655 aa11.95□□□□□ -0.5
MTHFD1-201ENST00000216605 DIP2CQ9Y2E4 1556 aa11.95□□□□□ -0.5
MTHFD1-201ENST00000216605 SAFB2Q14151 953 aaKnown RBP eCLIP11.95□□□□□ -0.5
MTHFD1-201ENST00000216605 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
MTHFD1-201ENST00000216605 STK26Q9P289 416 aa11.95□□□□□ -0.5
MTHFD1-201ENST00000216605 GLI2P10070 1586 aa11.95□□□□□ -0.5
MTHFD1-201ENST00000216605 ABCC3O15438 1527 aa11.94□□□□□ -0.5
MTHFD1-201ENST00000216605 SCAF11Q99590 1463 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-201ENST00000216605 RNF17Q9BXT8 1623 aaKnown RBP11.94□□□□□ -0.5
MTHFD1-201ENST00000216605 KIF1BO60333 1816 aa11.94□□□□□ -0.5
MTHFD1-201ENST00000216605 SLC52A1Q9NWF4 448 aa11.94□□□□□ -0.5
MTHFD1-201ENST00000216605 POLR1AO95602 1720 aaPredicted RBP11.93□□□□□ -0.5
MTHFD1-201ENST00000216605 MYBBP1AQ9BQG0 1328 aaKnown RBP11.93□□□□□ -0.5
MTHFD1-201ENST00000216605 LMTK2Q8IWU2 1503 aa11.93□□□□□ -0.5
MTHFD1-201ENST00000216605 RICTORQ6R327 1708 aa11.92□□□□□ -0.5
MTHFD1-201ENST00000216605 RPGRIP1LQ68CZ1 1315 aa11.92□□□□□ -0.5
MTHFD1-201ENST00000216605 MADDQ8WXG6 1647 aa11.92□□□□□ -0.5
MTHFD1-201ENST00000216605 CENPJQ9HC77 1338 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-201ENST00000216605 COL17A1Q9UMD9 1497 aaPredicted RBP11.91□□□□□ -0.5
MTHFD1-201ENST00000216605 NLRP13Q86W25 1043 aa11.9□□□□□ -0.5
MTHFD1-201ENST00000216605 IRX6P78412 446 aaPredicted RBP11.89□□□□□ -0.51
MTHFD1-201ENST00000216605 C14orf93Q9H972 538 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-201ENST00000216605 DHX37Q8IY37 1157 aaKnown RBP11.89□□□□□ -0.51
MTHFD1-201ENST00000216605 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
MTHFD1-201ENST00000216605 POGKQ9P215 609 aa11.88□□□□□ -0.51
MTHFD1-201ENST00000216605 CAMSAP1Q5T5Y3 1602 aa11.88□□□□□ -0.51
MTHFD1-201ENST00000216605 PER1O15534 1290 aaPredicted RBP11.88□□□□□ -0.51
MTHFD1-201ENST00000216605 MYOM2P54296 1465 aa11.87□□□□□ -0.51
MTHFD1-201ENST00000216605 PNISRQ8TF01 805 aaKnown RBP11.87□□□□□ -0.51
MTHFD1-201ENST00000216605 LAMC1P11047 1609 aa11.86□□□□□ -0.51
MTHFD1-201ENST00000216605 MROH2AA6NES4 1674 aa11.86□□□□□ -0.51
MTHFD1-201ENST00000216605 CHMP4AQ9BY43 222 aa11.86□□□□□ -0.51
MTHFD1-201ENST00000216605 BRD4O60885 1362 aaPredicted RBP11.85□□□□□ -0.51
MTHFD1-201ENST00000216605 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
MTHFD1-201ENST00000216605 PPP6R1Q9UPN7 881 aa11.85□□□□□ -0.51
MTHFD1-201ENST00000216605 ADGRB3O60242 1522 aa11.85□□□□□ -0.51
MTHFD1-201ENST00000216605 SRPK2P78362 688 aaKnown RBP11.85□□□□□ -0.51
MTHFD1-201ENST00000216605 ARHGAP31Q2M1Z3 1444 aa11.85□□□□□ -0.51
MTHFD1-201ENST00000216605 TNNT2P45379 298 aaPredicted RBP11.84□□□□□ -0.51
MTHFD1-201ENST00000216605 DEKP35659 375 aaKnown RBP11.84□□□□□ -0.51
MTHFD1-201ENST00000216605 WDR43Q15061 677 aaKnown RBP eCLIP11.84□□□□□ -0.51
MTHFD1-201ENST00000216605 FANCIQ9NVI1 1328 aa11.84□□□□□ -0.51
MTHFD1-201ENST00000216605 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
MTHFD1-201ENST00000216605 MINK1Q8N4C8 1332 aaPredicted RBP11.83□□□□□ -0.52
MTHFD1-201ENST00000216605 SLC12A5Q9H2X9 1139 aa11.83□□□□□ -0.52
MTHFD1-201ENST00000216605 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
MTHFD1-201ENST00000216605 PIK3C2GO75747 1445 aa11.82□□□□□ -0.52
MTHFD1-201ENST00000216605 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.82□□□□□ -0.52
MTHFD1-201ENST00000216605 PDE4CQ08493 712 aa11.82□□□□□ -0.52
MTHFD1-201ENST00000216605 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
MTHFD1-201ENST00000216605 PARD3Q8TEW0 1356 aa11.82□□□□□ -0.52
MTHFD1-201ENST00000216605 SYNMO15061 1565 aa11.81□□□□□ -0.52
MTHFD1-201ENST00000216605 SIGLEC1Q9BZZ2 1709 aa11.81□□□□□ -0.52
MTHFD1-201ENST00000216605 IQGAP1P46940 1657 aa11.81□□□□□ -0.52
MTHFD1-201ENST00000216605 ZMYM3Q14202 1370 aa11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 PRAM1Q96QH2 718 aa11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 MSH5O43196 834 aa11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 CEBPAP49715 358 aaPredicted RBP11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 TMEM132AQ24JP5 1023 aa11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
MTHFD1-201ENST00000216605 ZC3H13Q5T200 1668 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms