RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 FAM177BA6PVY3 158 aa10.84□□□□□ -0.67
SUPT16H-201ENST00000216297 TERF1P54274 439 aa10.84□□□□□ -0.67
SUPT16H-201ENST00000216297 TSC1Q92574 1164 aa10.84□□□□□ -0.67
SUPT16H-201ENST00000216297 PRPF40AO75400 957 aaKnown RBP10.83□□□□□ -0.68
SUPT16H-201ENST00000216297 CIZ1Q9ULV3 898 aaPredicted RBP10.83□□□□□ -0.68
SUPT16H-201ENST00000216297 CUX1P39880 1505 aa10.83□□□□□ -0.68
SUPT16H-201ENST00000216297 ZNF644Q9H582 1327 aaPredicted RBP10.83□□□□□ -0.68
SUPT16H-201ENST00000216297 DMTNQ08495 405 aa10.83□□□□□ -0.68
SUPT16H-201ENST00000216297 FOXD4L6Q3SYB3 417 aaPredicted RBP10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 FOXD4L3Q6VB84 417 aaPredicted RBP10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 ATAD2BQ9ULI0 1458 aa10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 ZKSCAN5Q9Y2L8 839 aa10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 NUP155O75694 1391 aa10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 PPP2R1AP30153 589 aa10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 HMGN5P82970 282 aaKnown RBP10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 LNPKQ9C0E8 428 aa10.82□□□□□ -0.68
SUPT16H-201ENST00000216297 KDM5BQ9UGL1 1544 aa10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 NOL7Q9UMY1 257 aaKnown RBP10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 PCDHB15Q9Y5E8 787 aa10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 PDCL2Q8N4E4 241 aa10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 GTPBP4Q9BZE4 634 aaKnown RBP10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 KIF3AQ9Y496 699 aa10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 PLEKHH1Q9ULM0 1364 aa10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 LETM1O95202 739 aaPredicted RBP10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 PPP1R9BQ96SB3 815 aa10.81□□□□□ -0.68
SUPT16H-201ENST00000216297 TSPY4P0CV99 314 aa10.8□□□□□ -0.68
SUPT16H-201ENST00000216297 TSPY10P0CW01 314 aa10.8□□□□□ -0.68
SUPT16H-201ENST00000216297 TNNT3P45378 269 aaPredicted RBP10.8□□□□□ -0.68
SUPT16H-201ENST00000216297 KLHL40Q2TBA0 621 aa10.8□□□□□ -0.68
SUPT16H-201ENST00000216297 NBPF1Q3BBV0 1214 aa10.8□□□□□ -0.68
SUPT16H-201ENST00000216297 KIF20AO95235 890 aa10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 SYCE3A1L190 88 aa10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 K7ELQ4 463 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 CHMP4AQ9BY43 222 aa10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 SMC4Q9NTJ3 1288 aa10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 SPINK5Q9NQ38 1064 aaPredicted RBP10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 RBM27Q9P2N5 1060 aaKnown RBP10.79□□□□□ -0.68
SUPT16H-201ENST00000216297 BAG4O95429 457 aaKnown RBP10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 ZSCAN23Q3MJ62 389 aa10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 PRIM1P49642 420 aaKnown RBP10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 UTP14CQ5TAP6 766 aaKnown RBP10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 PAXIP1Q6ZW49 1069 aaPredicted RBP10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 PARD3Q8TEW0 1356 aa10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 NUCB2P80303 420 aa10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 RAB3GAP1Q15042 981 aa10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 FGD5Q6ZNL6 1462 aa10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 RBSNQ9H1K0 784 aa10.78□□□□□ -0.68
SUPT16H-201ENST00000216297 KCNJ4P48050 445 aa10.77□□□□□ -0.68
SUPT16H-201ENST00000216297 CDCA8Q53HL2 280 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 HS1BP3Q53T59 392 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 ANKRD45Q5TZF3 282 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 TAF3Q5VWG9 929 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 ZKSCAN2Q63HK3 967 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 ZNF830Q96NB3 372 aaPredicted RBP10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 PLEKHH2Q8IVE3 1493 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 DZIP1LQ8IYY4 767 aaKnown RBP10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 STAC3Q96MF2 364 aa10.77□□□□□ -0.69
SUPT16H-201ENST00000216297 SYAP1Q96A49 352 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 TNNQ9UQP3 1299 aa10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 MCM5P33992 734 aa10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 ZNF500O60304 480 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 GTF2E1P29083 439 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 NKTRP30414 1462 aaKnown RBP10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 JARID2Q92833 1246 aaPredicted RBP10.76□□□□□ -0.69
SUPT16H-201ENST00000216297 NOL8Q76FK4 1167 aaKnown RBP10.75□□□□□ -0.69
SUPT16H-201ENST00000216297 AEBP1Q8IUX7 1158 aa10.75□□□□□ -0.69
SUPT16H-201ENST00000216297 TRERF1Q96PN7 1200 aa10.75□□□□□ -0.69
SUPT16H-201ENST00000216297 DIAPH3Q9NSV4 1193 aa10.75□□□□□ -0.69
SUPT16H-201ENST00000216297 RBM42Q9BTD8 480 aaKnown RBP10.75□□□□□ -0.69
SUPT16H-201ENST00000216297 TEX14Q8IWB6 1497 aa10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 ERICH4A6NGS2 130 aa10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 SMC5Q8IY18 1101 aa10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 DRC7Q8IY82 874 aa10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 CCDC66A2RUB6 948 aa10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 PER1O15534 1290 aaPredicted RBP10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 ZSCAN20P17040 1043 aaPredicted RBP10.74□□□□□ -0.69
SUPT16H-201ENST00000216297 RLBP1P12271 317 aa10.73□□□□□ -0.69
SUPT16H-201ENST00000216297 TSPY26PQ9H489 355 aa10.73□□□□□ -0.69
SUPT16H-201ENST00000216297 KIF16BQ96L93 1317 aa10.73□□□□□ -0.69
SUPT16H-201ENST00000216297 MYRIPQ8NFW9 859 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 PRIMPOLQ96LW4 560 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 ANKRD30AQ9BXX3 1397 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 APBB1O00213 710 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 RARSP54136 660 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 CASC1Q6TDU7 716 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 GAS2L2Q8NHY3 880 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 KIAA1107Q9UPP5 1409 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 ST18O60284 1047 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 U2AF2P26368 475 aaKnown RBP eCLIP10.72□□□□□ -0.691e-8■■■■□ 26.7
SUPT16H-201ENST00000216297 IPO4Q8TEX9 1081 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 ZBTB22O15209 634 aa10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 MVPQ14764 893 aaKnown RBP10.72□□□□□ -0.69
SUPT16H-201ENST00000216297 NOLC1Q14978 699 aaKnown RBP eCLIP10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 ZNF592Q92610 1267 aa10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.71□□□□□ -0.699e-8■□□□□ 10.7
SUPT16H-201ENST00000216297 U2SURPO15042 1029 aaKnown RBP10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 PHF14O94880 888 aa10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 C17orf53Q8N3J3 647 aaPredicted RBP10.71□□□□□ -0.69
SUPT16H-201ENST00000216297 CFAP43Q8NDM7 1665 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms