RNA–Protein interactions for RNA: ENST00000215730.11

SNAP29-201, Transcript of synaptosome associated protein 29, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAP29, Length 4,287 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-201ENST00000215730 SYCP2Q9BX26 1530 aa18.71■□□□□ 0.59
SNAP29-201ENST00000215730 PSME1Q06323 249 aa18.7■□□□□ 0.58
SNAP29-201ENST00000215730 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
SNAP29-201ENST00000215730 PDE4AP27815 886 aa18.69■□□□□ 0.58
SNAP29-201ENST00000215730 RNF123Q5XPI4 1314 aa18.68■□□□□ 0.58
SNAP29-201ENST00000215730 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
SNAP29-201ENST00000215730 KNSTRNQ9Y448 316 aa18.66■□□□□ 0.58
SNAP29-201ENST00000215730 FAM135AQ9P2D6 1515 aa18.66■□□□□ 0.58
SNAP29-201ENST00000215730 BRD4O60885 1362 aaPredicted RBP18.66■□□□□ 0.58
SNAP29-201ENST00000215730 ZCCHC11Q5TAX3 1644 aaKnown RBP18.65■□□□□ 0.58
SNAP29-201ENST00000215730 ZFYVE16Q7Z3T8 1539 aa18.65■□□□□ 0.58
SNAP29-201ENST00000215730 NCKAP5LQ9HCH0 1330 aa18.65■□□□□ 0.58
SNAP29-201ENST00000215730 EIF3AQ14152 1382 aaKnown RBP18.65■□□□□ 0.58
SNAP29-201ENST00000215730 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
SNAP29-201ENST00000215730 NLRP13Q86W25 1043 aa18.65■□□□□ 0.58
SNAP29-201ENST00000215730 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.58
SNAP29-201ENST00000215730 RTN4Q9NQC3 1192 aaKnown RBP18.64■□□□□ 0.58
SNAP29-201ENST00000215730 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
SNAP29-201ENST00000215730 PDE3BQ13370 1112 aa18.63■□□□□ 0.57
SNAP29-201ENST00000215730 ESCO1Q5FWF5 840 aa18.63■□□□□ 0.57
SNAP29-201ENST00000215730 CC2D1BQ5T0F9 858 aaKnown RBP18.63■□□□□ 0.57
SNAP29-201ENST00000215730 DDRGK1Q96HY6 314 aa18.62■□□□□ 0.57
SNAP29-201ENST00000215730 NUTM2BA6NNL0 878 aaPredicted RBP18.62■□□□□ 0.57
SNAP29-201ENST00000215730 NUTM2EB1AL46 878 aaPredicted RBP18.62■□□□□ 0.57
SNAP29-201ENST00000215730 NUTM2AQ8IVF1 878 aaPredicted RBP18.62■□□□□ 0.57
SNAP29-201ENST00000215730 DNMT1P26358 1616 aaKnown RBP18.62■□□□□ 0.57
SNAP29-201ENST00000215730 PZPP20742 1482 aa18.61■□□□□ 0.57
SNAP29-201ENST00000215730 TERF2IPQ9NYB0 399 aa18.6■□□□□ 0.57
SNAP29-201ENST00000215730 PLIN1O60240 522 aa18.6■□□□□ 0.57
SNAP29-201ENST00000215730 MAGI2Q86UL8 1455 aa18.6■□□□□ 0.57
SNAP29-201ENST00000215730 ADCY10Q96PN6 1610 aa18.6■□□□□ 0.57
SNAP29-201ENST00000215730 EVA1CP58658 441 aa18.59■□□□□ 0.57
SNAP29-201ENST00000215730 RPGRIP1LQ68CZ1 1315 aa18.59■□□□□ 0.57
SNAP29-201ENST00000215730 MS4A1P11836 297 aa18.59■□□□□ 0.57
SNAP29-201ENST00000215730 RTEL1-TNFRSF6BF6WH68 1400 aa18.59■□□□□ 0.57
SNAP29-201ENST00000215730 RBM33Q96EV2 1170 aaKnown RBP18.58■□□□□ 0.57
SNAP29-201ENST00000215730 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.58■□□□□ 0.572e-6■■■□□ 16.8
SNAP29-201ENST00000215730 TNNT2P45379 298 aaPredicted RBP18.57■□□□□ 0.56
SNAP29-201ENST00000215730 CDCA7LQ96GN5 454 aa18.57■□□□□ 0.56
SNAP29-201ENST00000215730 BACH2Q9BYV9 841 aa18.57■□□□□ 0.56
SNAP29-201ENST00000215730 CFAP70Q5T0N1 1121 aa18.56■□□□□ 0.56
SNAP29-201ENST00000215730 USP35Q9P2H5 1018 aa18.56■□□□□ 0.56
SNAP29-201ENST00000215730 CFAP74Q9C0B2 1584 aa18.55■□□□□ 0.56
SNAP29-201ENST00000215730 CFAP53Q96M91 514 aa18.55■□□□□ 0.56
SNAP29-201ENST00000215730 AMOTL2Q9Y2J4 779 aa18.55■□□□□ 0.56
SNAP29-201ENST00000215730 CRBNQ96SW2 442 aa18.54■□□□□ 0.56
SNAP29-201ENST00000215730 LMTK3Q96Q04 1460 aa18.54■□□□□ 0.56
SNAP29-201ENST00000215730 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
SNAP29-201ENST00000215730 CADPS2Q86UW7 1296 aa18.54■□□□□ 0.56
SNAP29-201ENST00000215730 ITSN2Q9NZM3 1697 aa18.53■□□□□ 0.56
SNAP29-201ENST00000215730 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
SNAP29-201ENST00000215730 POLR1AO95602 1720 aaPredicted RBP18.53■□□□□ 0.56
SNAP29-201ENST00000215730 BCORL1Q5H9F3 1711 aa18.53■□□□□ 0.56
SNAP29-201ENST00000215730 RALGAPBQ86X10 1494 aa18.52■□□□□ 0.56
SNAP29-201ENST00000215730 LRPPRCP42704 1394 aaKnown RBP18.52■□□□□ 0.55
SNAP29-201ENST00000215730 IL27Q8NEV9 243 aa18.52■□□□□ 0.55
SNAP29-201ENST00000215730 WDR43Q15061 677 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNAP29-201ENST00000215730 GPRASP1Q5JY77 1395 aa18.51■□□□□ 0.55
SNAP29-201ENST00000215730 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNAP29-201ENST00000215730 DUOX2Q9NRD8 1548 aa18.5■□□□□ 0.55
SNAP29-201ENST00000215730 SHROOM2Q13796 1616 aa18.5■□□□□ 0.55
SNAP29-201ENST00000215730 MBD5Q9P267 1494 aa18.5■□□□□ 0.55
SNAP29-201ENST00000215730 ATP7AQ04656 1500 aa18.49■□□□□ 0.55
SNAP29-201ENST00000215730 PRAM1Q96QH2 718 aa18.49■□□□□ 0.55
SNAP29-201ENST00000215730 MSH6P52701 1360 aa18.49■□□□□ 0.55
SNAP29-201ENST00000215730 KDM5CP41229 1560 aa18.49■□□□□ 0.55
SNAP29-201ENST00000215730 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.48■□□□□ 0.55
SNAP29-201ENST00000215730 CENPJQ9HC77 1338 aaPredicted RBP18.48■□□□□ 0.55
SNAP29-201ENST00000215730 SKAP1Q86WV1 359 aa18.47■□□□□ 0.55
SNAP29-201ENST00000215730 AMPHP49418 695 aa18.46■□□□□ 0.55
SNAP29-201ENST00000215730 PANK3Q9H999 370 aa18.46■□□□□ 0.55
SNAP29-201ENST00000215730 SLC4A3P48751 1232 aa18.46■□□□□ 0.55
SNAP29-201ENST00000215730 PMFBP1Q8TBY8 1022 aa18.46■□□□□ 0.55
SNAP29-201ENST00000215730 ARXQ96QS3 562 aa18.46■□□□□ 0.55
SNAP29-201ENST00000215730 RGS3P49796 1198 aa18.45■□□□□ 0.54
SNAP29-201ENST00000215730 MORC1Q86VD1 984 aa18.44■□□□□ 0.54
SNAP29-201ENST00000215730 ANO8Q9HCE9 1232 aaPredicted RBP18.44■□□□□ 0.54
SNAP29-201ENST00000215730 NBPF1Q3BBV0 1214 aa18.44■□□□□ 0.54
SNAP29-201ENST00000215730 MLH3Q9UHC1 1453 aa18.43■□□□□ 0.54
SNAP29-201ENST00000215730 LTV1Q96GA3 475 aaPredicted RBP18.43■□□□□ 0.54
SNAP29-201ENST00000215730 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
SNAP29-201ENST00000215730 ADGRL2O95490 1459 aa18.4■□□□□ 0.54
SNAP29-201ENST00000215730 PARD3Q8TEW0 1356 aa18.39■□□□□ 0.54
SNAP29-201ENST00000215730 U2SURPO15042 1029 aaKnown RBP18.39■□□□□ 0.53
SNAP29-201ENST00000215730 XPCQ01831 940 aaPredicted RBP18.39■□□□□ 0.53
SNAP29-201ENST00000215730 NUTM2GQ5VZR2 741 aa18.39■□□□□ 0.53
SNAP29-201ENST00000215730 TTC37Q6PGP7 1564 aa18.39■□□□□ 0.53
SNAP29-201ENST00000215730 GSE1Q14687 1217 aa18.39■□□□□ 0.53
SNAP29-201ENST00000215730 ADGBQ8N7X0 1667 aa18.39■□□□□ 0.53
SNAP29-201ENST00000215730 ARHGEF12Q9NZN5 1544 aa18.39■□□□□ 0.53
SNAP29-201ENST00000215730 CENPQQ7L2Z9 268 aaPredicted RBP18.39■□□□□ 0.53
SNAP29-201ENST00000215730 NLRP6P59044 892 aa18.38■□□□□ 0.53
SNAP29-201ENST00000215730 DIP2BQ9P265 1576 aa18.38■□□□□ 0.53
SNAP29-201ENST00000215730 SF3B2Q13435 895 aaKnown RBP18.38■□□□□ 0.53
SNAP29-201ENST00000215730 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
SNAP29-201ENST00000215730 ADAMTS2O95450 1211 aa18.37■□□□□ 0.53
SNAP29-201ENST00000215730 CANXP27824 592 aaKnown RBP18.37■□□□□ 0.53
SNAP29-201ENST00000215730 NFKBIBQ15653 356 aa18.37■□□□□ 0.53
SNAP29-201ENST00000215730 ABTB2Q8N961 1025 aa18.37■□□□□ 0.53
SNAP29-201ENST00000215730 COG3Q96JB2 828 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms