RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 C22orf23Q9BZE7 217 aa12.7□□□□□ -0.38
CLDN18-201ENST00000183605 PLEKHG5O94827 1062 aa12.7□□□□□ -0.38
CLDN18-201ENST00000183605 FTSJ3Q8IY81 847 aaKnown RBP12.7□□□□□ -0.38
CLDN18-201ENST00000183605 R3HCC1Q9Y3T6 440 aaKnown RBP12.69□□□□□ -0.38
CLDN18-201ENST00000183605 ABCA8O94911 1581 aa12.68□□□□□ -0.38
CLDN18-201ENST00000183605 NBPF1Q3BBV0 1214 aa12.68□□□□□ -0.38
CLDN18-201ENST00000183605 DENND4BO75064 1496 aaPredicted RBP12.68□□□□□ -0.38
CLDN18-201ENST00000183605 E9PSI1 815 aa12.67□□□□□ -0.38
CLDN18-201ENST00000183605 DNTTIP2Q5QJE6 756 aaKnown RBP12.67□□□□□ -0.38
CLDN18-201ENST00000183605 PDZRN3Q9UPQ7 1066 aa12.67□□□□□ -0.38
CLDN18-201ENST00000183605 DISP1Q96F81 1524 aa12.67□□□□□ -0.38
CLDN18-201ENST00000183605 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
CLDN18-201ENST00000183605 HECW1Q76N89 1606 aa12.67□□□□□ -0.38
CLDN18-201ENST00000183605 TNNT2P45379 298 aaPredicted RBP12.66□□□□□ -0.38
CLDN18-201ENST00000183605 SLFN5Q08AF3 891 aa12.66□□□□□ -0.38
CLDN18-201ENST00000183605 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.66□□□□□ -0.38
CLDN18-201ENST00000183605 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
CLDN18-201ENST00000183605 NASPP49321 788 aaPredicted RBP12.66□□□□□ -0.38
CLDN18-201ENST00000183605 KDM6BO15054 1643 aa12.65□□□□□ -0.38
CLDN18-201ENST00000183605 PARD3Q8TEW0 1356 aa12.65□□□□□ -0.38
CLDN18-201ENST00000183605 DAPK1P53355 1430 aa12.65□□□□□ -0.38
CLDN18-201ENST00000183605 PTMAP06454 111 aaKnown RBP12.65□□□□□ -0.38
CLDN18-201ENST00000183605 DDX49Q9Y6V7 483 aaKnown RBP12.65□□□□□ -0.38
CLDN18-201ENST00000183605 PPP2R1AP30153 589 aa12.65□□□□□ -0.38
CLDN18-201ENST00000183605 EIF3AQ14152 1382 aaKnown RBP12.65□□□□□ -0.38
CLDN18-201ENST00000183605 ANKRD30AQ9BXX3 1397 aa12.65□□□□□ -0.38
CLDN18-201ENST00000183605 FSD2A1L4K1 749 aa12.64□□□□□ -0.39
CLDN18-201ENST00000183605 SKOR2Q2VWA4 1001 aaPredicted RBP12.64□□□□□ -0.39
CLDN18-201ENST00000183605 RRP7AQ9Y3A4 280 aaKnown RBP12.64□□□□□ -0.39
CLDN18-201ENST00000183605 PDE3AQ14432 1141 aa12.63□□□□□ -0.39
CLDN18-201ENST00000183605 ISY1Q9ULR0 285 aaKnown RBP12.63□□□□□ -0.39
CLDN18-201ENST00000183605 PLEKHH1Q9ULM0 1364 aa12.63□□□□□ -0.39
CLDN18-201ENST00000183605 USP19O94966 1318 aa12.63□□□□□ -0.39
CLDN18-201ENST00000183605 ANTXR1Q9H6X2 564 aa12.62□□□□□ -0.39
CLDN18-201ENST00000183605 ABCC2Q92887 1545 aa12.62□□□□□ -0.39
CLDN18-201ENST00000183605 ROCK1Q13464 1354 aa12.62□□□□□ -0.39
CLDN18-201ENST00000183605 PER1O15534 1290 aaPredicted RBP12.62□□□□□ -0.39
CLDN18-201ENST00000183605 CCDC173Q0VFZ6 552 aa12.61□□□□□ -0.39
CLDN18-201ENST00000183605 CDCA8Q53HL2 280 aa12.61□□□□□ -0.39
CLDN18-201ENST00000183605 ZSCAN30Q86W11 494 aa12.61□□□□□ -0.39
CLDN18-201ENST00000183605 ABCC5O15440 1437 aa12.61□□□□□ -0.39
CLDN18-201ENST00000183605 ZCCHC11Q5TAX3 1644 aaKnown RBP12.61□□□□□ -0.39
CLDN18-201ENST00000183605 PTMSP20962 102 aa12.61□□□□□ -0.39
CLDN18-201ENST00000183605 MAP7D2Q96T17 732 aa12.61□□□□□ -0.39
CLDN18-201ENST00000183605 PLEKHH2Q8IVE3 1493 aa12.6□□□□□ -0.39
CLDN18-201ENST00000183605 ERBB4Q15303 1308 aa12.6□□□□□ -0.39
CLDN18-201ENST00000183605 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
CLDN18-201ENST00000183605 PRDM10Q9NQV6 1147 aa12.6□□□□□ -0.39
CLDN18-201ENST00000183605 SPINK5Q9NQ38 1064 aaPredicted RBP12.59□□□□□ -0.39
CLDN18-201ENST00000183605 BCORL1Q5H9F3 1711 aa12.58□□□□□ -0.39
CLDN18-201ENST00000183605 TNPO1Q92973 898 aaKnown RBP12.58□□□□□ -0.4
CLDN18-201ENST00000183605 ABCC10Q5T3U5 1492 aa12.58□□□□□ -0.4
CLDN18-201ENST00000183605 CDK13Q14004 1512 aaKnown RBP12.58□□□□□ -0.4
CLDN18-201ENST00000183605 UQCRHLA0A096LP55 91 aa12.58□□□□□ -0.4
CLDN18-201ENST00000183605 UQCRHP07919 91 aa12.58□□□□□ -0.4
CLDN18-201ENST00000183605 ITPRIPQ8IWB1 547 aa12.58□□□□□ -0.4
CLDN18-201ENST00000183605 ANKRD50Q9ULJ7 1429 aa12.57□□□□□ -0.4
CLDN18-201ENST00000183605 ZHX1Q9UKY1 873 aaPredicted RBP12.57□□□□□ -0.4
CLDN18-201ENST00000183605 TCOF1Q13428 1488 aaKnown RBP12.57□□□□□ -0.4
CLDN18-201ENST00000183605 PCDHB15Q9Y5E8 787 aa12.56□□□□□ -0.4
CLDN18-201ENST00000183605 RALGAPBQ86X10 1494 aa12.56□□□□□ -0.4
CLDN18-201ENST00000183605 XPCQ01831 940 aaPredicted RBP12.55□□□□□ -0.4
CLDN18-201ENST00000183605 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
CLDN18-201ENST00000183605 GAS2L3Q86XJ1 694 aa12.55□□□□□ -0.4
CLDN18-201ENST00000183605 CCDC144AA2RUR9 1427 aa12.55□□□□□ -0.4
CLDN18-201ENST00000183605 EPRSP07814 1512 aaKnown RBP12.55□□□□□ -0.4
CLDN18-201ENST00000183605 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
CLDN18-201ENST00000183605 DISP3Q9P2K9 1392 aa12.54□□□□□ -0.4
CLDN18-201ENST00000183605 FBLN2P98095 1184 aa12.54□□□□□ -0.4
CLDN18-201ENST00000183605 TPRNQ4KMQ1 711 aa12.54□□□□□ -0.4
CLDN18-201ENST00000183605 GCC2Q8IWJ2 1684 aa12.54□□□□□ -0.4
CLDN18-201ENST00000183605 PLEKHD1A6NEE1 506 aa12.54□□□□□ -0.4
CLDN18-201ENST00000183605 CAVIN1Q6NZI2 390 aaKnown RBP12.54□□□□□ -0.4
CLDN18-201ENST00000183605 OFD1O75665 1012 aa12.53□□□□□ -0.4
CLDN18-201ENST00000183605 ZMYM4Q5VZL5 1548 aa12.53□□□□□ -0.4
CLDN18-201ENST00000183605 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
CLDN18-201ENST00000183605 MCTP1Q6DN14 999 aa12.53□□□□□ -0.4
CLDN18-201ENST00000183605 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
CLDN18-201ENST00000183605 ABCA9Q8IUA7 1624 aa12.53□□□□□ -0.4
CLDN18-201ENST00000183605 HNRNPMP52272 730 aaKnown RBP eCLIP12.52□□□□□ -0.4
CLDN18-201ENST00000183605 LNPKQ9C0E8 428 aa12.52□□□□□ -0.4
CLDN18-201ENST00000183605 TNNQ9UQP3 1299 aa12.52□□□□□ -0.4
CLDN18-201ENST00000183605 PZPP20742 1482 aa12.52□□□□□ -0.4
CLDN18-201ENST00000183605 ZKSCAN2Q63HK3 967 aa12.51□□□□□ -0.41
CLDN18-201ENST00000183605 MTERF4Q7Z6M4 381 aaKnown RBP12.51□□□□□ -0.41
CLDN18-201ENST00000183605 ERBINQ96RT1 1412 aa12.51□□□□□ -0.41
CLDN18-201ENST00000183605 CSPP1Q1MSJ5 1256 aa12.51□□□□□ -0.41
CLDN18-201ENST00000183605 KDM5CP41229 1560 aa12.51□□□□□ -0.41
CLDN18-201ENST00000183605 PRG4Q92954 1404 aaPredicted RBP12.51□□□□□ -0.41
CLDN18-201ENST00000183605 DZIP1LQ8IYY4 767 aaKnown RBP12.51□□□□□ -0.41
CLDN18-201ENST00000183605 MAGI3Q5TCQ9 1506 aa12.5□□□□□ -0.41
CLDN18-201ENST00000183605 PLCB2Q00722 1185 aa12.5□□□□□ -0.41
CLDN18-201ENST00000183605 MORC1Q86VD1 984 aa12.5□□□□□ -0.41
CLDN18-201ENST00000183605 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
CLDN18-201ENST00000183605 AAMPQ13685 434 aa12.5□□□□□ -0.41
CLDN18-201ENST00000183605 FOXD4L5Q5VV16 416 aaPredicted RBP12.5□□□□□ -0.41
CLDN18-201ENST00000183605 WWC1Q8IX03 1113 aa12.5□□□□□ -0.41
CLDN18-201ENST00000183605 FOXD4L4Q8WXT5 416 aaPredicted RBP12.5□□□□□ -0.41
CLDN18-201ENST00000183605 CIZ1Q9ULV3 898 aaPredicted RBP12.5□□□□□ -0.41
CLDN18-201ENST00000183605 SSFA2P28290 1259 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms