RNA–Protein interactions for RNA: ENSMUST00000106441.7

Trim47-202, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Trim47, Length 2,192 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-202ENSMUST00000106441 Ppip5k1A2ARP1 1436 aa25.01■■□□□ 1.59
Trim47-202ENSMUST00000106441 Washc2Q6PGL7 1334 aa24.98■■□□□ 1.59
Trim47-202ENSMUST00000106441 Tecpr2Q3UH45 1423 aa24.98■■□□□ 1.59
Trim47-202ENSMUST00000106441 Rock1P70335 1354 aa24.97■■□□□ 1.59
Trim47-202ENSMUST00000106441 ErbinQ80TH2 1402 aa24.97■■□□□ 1.59
Trim47-202ENSMUST00000106441 Adgrb3Q80ZF8 1522 aa24.96■■□□□ 1.59
Trim47-202ENSMUST00000106441 Med14A2ABV5 1459 aaKnown RBP24.96■■□□□ 1.59
Trim47-202ENSMUST00000106441 Abca8aQ8K442 1620 aa24.96■■□□□ 1.59
Trim47-202ENSMUST00000106441 MyclP10166 368 aa24.95■■□□□ 1.58
Trim47-202ENSMUST00000106441 Dip2bQ3UH60 1574 aa24.94■■□□□ 1.58
Trim47-202ENSMUST00000106441 Ahdc1Q6PAL7 1594 aaKnown RBP24.94■■□□□ 1.58
Trim47-202ENSMUST00000106441 Stk24Q99KH8 431 aa24.94■■□□□ 1.58
Trim47-202ENSMUST00000106441 Abcc6Q9R1S7 1498 aa24.94■■□□□ 1.58
Trim47-202ENSMUST00000106441 Nolc1E9Q5C9 702 aaKnown RBP24.93■■□□□ 1.58
Trim47-202ENSMUST00000106441 Rgl3Q3UYI5 709 aa24.93■■□□□ 1.58
Trim47-202ENSMUST00000106441 Slc24a1Q91WD8 1130 aa24.93■■□□□ 1.58
Trim47-202ENSMUST00000106441 Skint5A7XUY5 1461 aa24.93■■□□□ 1.58
Trim47-202ENSMUST00000106441 Efcab6Q6P1E8 1516 aa24.93■■□□□ 1.58
Trim47-202ENSMUST00000106441 Mrs2Q5NCE8 434 aa24.91■■□□□ 1.58
Trim47-202ENSMUST00000106441 Ehbp1l1Q99MS7 1716 aa24.91■■□□□ 1.58
Trim47-202ENSMUST00000106441 Sall3Q62255 1320 aa24.9■■□□□ 1.58
Trim47-202ENSMUST00000106441 Uggt1Q6P5E4 1551 aa24.9■■□□□ 1.58
Trim47-202ENSMUST00000106441 4930407I10RikD3Z5T8 1512 aa24.87■■□□□ 1.57
Trim47-202ENSMUST00000106441 Ercc6l2Q9JIM3 1537 aa24.87■■□□□ 1.57
Trim47-202ENSMUST00000106441 NrdcQ8BHG1 1161 aa24.86■■□□□ 1.57
Trim47-202ENSMUST00000106441 Cwc22Q8C5N3 908 aaKnown RBP24.86■■□□□ 1.57
Trim47-202ENSMUST00000106441 Slc4a2P13808 1237 aaKnown RBP24.85■■□□□ 1.57
Trim47-202ENSMUST00000106441 Mroh3A0A1D5RM54 893 aa24.84■■□□□ 1.57
Trim47-202ENSMUST00000106441 Kif13aQ9EQW7 1749 aa24.84■■□□□ 1.57
Trim47-202ENSMUST00000106441 Mbd5B1AYB6 1498 aa24.84■■□□□ 1.57
Trim47-202ENSMUST00000106441 Plekhg5Q66T02 1073 aa24.83■■□□□ 1.56
Trim47-202ENSMUST00000106441 AatkQ80YE4 1365 aa24.81■■□□□ 1.56
Trim47-202ENSMUST00000106441 Mroh1E0CZ22 1640 aa24.8■■□□□ 1.56
Trim47-202ENSMUST00000106441 PtprmP28828 1452 aa24.8■■□□□ 1.56
Trim47-202ENSMUST00000106441 PnisrA2AJT4 805 aaKnown RBP24.8■■□□□ 1.56
Trim47-202ENSMUST00000106441 Itsn1Q9Z0R4 1714 aa24.8■■□□□ 1.56
Trim47-202ENSMUST00000106441 Supt16hQ920B9 1047 aa24.8■■□□□ 1.56
Trim47-202ENSMUST00000106441 Exoc6Q8R313 802 aa24.79■■□□□ 1.56
Trim47-202ENSMUST00000106441 Wdr43Q6ZQL4 677 aaKnown RBP24.78■■□□□ 1.56
Trim47-202ENSMUST00000106441 Tulp4Q9JIL5 1547 aa24.77■■□□□ 1.56
Trim47-202ENSMUST00000106441 Kdm5aQ3UXZ9 1690 aa24.77■■□□□ 1.56
Trim47-202ENSMUST00000106441 Iqgap1Q9JKF1 1657 aaKnown RBP24.77■■□□□ 1.56
Trim47-202ENSMUST00000106441 Bcl9Q9D219 1425 aa24.77■■□□□ 1.56
Trim47-202ENSMUST00000106441 Wwc2Q6NXJ0 1187 aa24.76■■□□□ 1.55
Trim47-202ENSMUST00000106441 Adamts13Q769J6 1426 aa24.76■■□□□ 1.55
Trim47-202ENSMUST00000106441 Chd2E9PZM4 1827 aaKnown RBP24.75■■□□□ 1.55
Trim47-202ENSMUST00000106441 Brwd3A2AHJ4 1799 aa24.75■■□□□ 1.55
Trim47-202ENSMUST00000106441 Topaz1E5FYH1 1653 aa24.74■■□□□ 1.55
Trim47-202ENSMUST00000106441 Dapk1Q80YE7 1442 aa24.74■■□□□ 1.55
Trim47-202ENSMUST00000106441 Naip7Q9JIB3 1402 aa24.74■■□□□ 1.55
Trim47-202ENSMUST00000106441 Prrc2bQ7TPM1 1486 aaKnown RBP24.72■■□□□ 1.55
Trim47-202ENSMUST00000106441 Eif5bQ05D44 1216 aaKnown RBP24.72■■□□□ 1.55
Trim47-202ENSMUST00000106441 Grwd1Q810D6 446 aaKnown RBP24.72■■□□□ 1.55
Trim47-202ENSMUST00000106441 Ifit1bl1D3Z6F0 470 aa24.7■■□□□ 1.55
Trim47-202ENSMUST00000106441 Plxnc1Q9QZC2 1574 aa24.7■■□□□ 1.54
Trim47-202ENSMUST00000106441 Ppp4r2Q0VGB7 417 aa24.69■■□□□ 1.54
Trim47-202ENSMUST00000106441 Mug2P28666 1451 aa24.68■■□□□ 1.54
Trim47-202ENSMUST00000106441 Rims1Q99NE5 1463 aa24.68■■□□□ 1.54
Trim47-202ENSMUST00000106441 Polr3aB2RXC6 1390 aa24.67■■□□□ 1.54
Trim47-202ENSMUST00000106441 Cdk13Q69ZA1 1511 aaKnown RBP24.67■■□□□ 1.54
Trim47-202ENSMUST00000106441 Cpsf1Q9EPU4 1441 aaKnown RBP24.66■■□□□ 1.54
Trim47-202ENSMUST00000106441 Myom1Q62234 1667 aaKnown RBP24.65■■□□□ 1.54
Trim47-202ENSMUST00000106441 Cep152A2AUM9 1736 aaKnown RBP24.65■■□□□ 1.54
Trim47-202ENSMUST00000106441 Zc3h13E9Q784 1729 aaKnown RBP24.63■■□□□ 1.53
Trim47-202ENSMUST00000106441 Rundc1Q0VDN7 615 aa24.62■■□□□ 1.53
Trim47-202ENSMUST00000106441 Rock2P70336 1388 aa24.62■■□□□ 1.53
Trim47-202ENSMUST00000106441 AU022751B1B0V2 589 aa24.61■■□□□ 1.53
Trim47-202ENSMUST00000106441 GphnQ8BUV3 769 aaKnown RBP24.61■■□□□ 1.53
Trim47-202ENSMUST00000106441 Gemin5Q8BX17 1502 aaKnown RBP24.61■■□□□ 1.53
Trim47-202ENSMUST00000106441 P3h3Q8CG70 732 aa24.61■■□□□ 1.53
Trim47-202ENSMUST00000106441 Txndc2Q6P902 515 aa24.6■■□□□ 1.53
Trim47-202ENSMUST00000106441 PplQ9R269 1755 aa24.6■■□□□ 1.53
Trim47-202ENSMUST00000106441 RalgapbQ8BQZ4 1484 aa24.59■■□□□ 1.53
Trim47-202ENSMUST00000106441 Card11Q8CIS0 1159 aa24.59■■□□□ 1.53
Trim47-202ENSMUST00000106441 Myo3aQ8K3H5 1613 aa24.58■■□□□ 1.53
Trim47-202ENSMUST00000106441 Kdm2aP59997 1161 aa24.58■■□□□ 1.53
Trim47-202ENSMUST00000106441 Os9Q8K2C7 672 aa24.56■■□□□ 1.52
Trim47-202ENSMUST00000106441 Srpk2O54781 681 aaKnown RBP24.54■■□□□ 1.52
Trim47-202ENSMUST00000106441 Atp1b4Q99ME6 356 aa24.54■■□□□ 1.52
Trim47-202ENSMUST00000106441 Eif2ak4Q9QZ05 1648 aa24.53■■□□□ 1.52
Trim47-202ENSMUST00000106441 Arhgef28P97433 1693 aa24.53■■□□□ 1.52
Trim47-202ENSMUST00000106441 Psme1P97371 249 aa24.53■■□□□ 1.52
Trim47-202ENSMUST00000106441 Ofd1Q80Z25 1017 aa24.52■■□□□ 1.52
Trim47-202ENSMUST00000106441 Arid4bA2CG63 1314 aaKnown RBP24.52■■□□□ 1.52
Trim47-202ENSMUST00000106441 Cdk5rap2Q8K389 1822 aa24.51■■□□□ 1.51
Trim47-202ENSMUST00000106441 Gm20521D3Z5F7 333 aa24.5■■□□□ 1.51
Trim47-202ENSMUST00000106441 Rimbp3Q3V0F0 1606 aa24.5■■□□□ 1.51
Trim47-202ENSMUST00000106441 Fan1Q69ZT1 1020 aa24.49■■□□□ 1.51
Trim47-202ENSMUST00000106441 Shq1Q7TMX5 569 aa24.47■■□□□ 1.51
Trim47-202ENSMUST00000106441 Slc52a2Q9D8F3 450 aa24.47■■□□□ 1.51
Trim47-202ENSMUST00000106441 Setd1aE9PYH6 1716 aa24.47■■□□□ 1.51
Trim47-202ENSMUST00000106441 Scaf11E9PZM7 1456 aaKnown RBP24.45■■□□□ 1.51
Trim47-202ENSMUST00000106441 Dip2aQ8BWT5 1523 aa24.45■■□□□ 1.5
Trim47-202ENSMUST00000106441 Rims2Q9EQZ7 1530 aa24.44■■□□□ 1.5
Trim47-202ENSMUST00000106441 Phlpp1Q8CHE4 1687 aa24.43■■□□□ 1.5
Trim47-202ENSMUST00000106441 Q9D9H8 365 aa24.43■■□□□ 1.5
Trim47-202ENSMUST00000106441 Scn4aQ9ER60 1841 aa24.43■■□□□ 1.5
Trim47-202ENSMUST00000106441 Puf60Q3UEB3 564 aaKnown RBP24.43■■□□□ 1.5
Trim47-202ENSMUST00000106441 Liat1Q810M6 228 aa24.42■■□□□ 1.5
Trim47-202ENSMUST00000106441 PalldQ9ET54 1408 aa24.42■■□□□ 1.5
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms