RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W YPR063CQ12160 140 aa4.13□□□□□ -1.75
PRP40YKL012W YLR462WO13556 202 aa4.12□□□□□ -1.75
PRP40YKL012W CDC28P00546 298 aaKnown RBP4.12□□□□□ -1.75
PRP40YKL012W MET2P08465 486 aa4.12□□□□□ -1.75
PRP40YKL012W DBF2P22204 572 aa4.12□□□□□ -1.75
PRP40YKL012W YEL075CP39972 122 aa4.12□□□□□ -1.75
PRP40YKL012W BXI1P48558 297 aa4.12□□□□□ -1.75
PRP40YKL012W PDR17P53844 350 aa4.12□□□□□ -1.75
PRP40YKL012W YRF1-3P0CX14 1859 aa4.12□□□□□ -1.75
PRP40YKL012W YRF1-7P0CX15 1859 aa4.12□□□□□ -1.75
PRP40YKL012W YRF1-6P53819 1859 aa4.12□□□□□ -1.75
PRP40YKL012W IPP1P00817 287 aaKnown RBP4.12□□□□□ -1.75
PRP40YKL012W AST1P35183 429 aa4.12□□□□□ -1.75
PRP40YKL012W YCR087C-AP37263 153 aa4.12□□□□□ -1.75
PRP40YKL012W YER034WP40022 185 aaKnown RBP4.12□□□□□ -1.75
PRP40YKL012W YIR035CP40579 254 aa4.12□□□□□ -1.75
PRP40YKL012W FCF1Q05498 189 aaPredicted RBP4.12□□□□□ -1.75
PRP40YKL012W TKL2P33315 681 aa4.11□□□□□ -1.75
PRP40YKL012W CAT5P41735 233 aa4.11□□□□□ -1.75
PRP40YKL012W FAR8Q05040 523 aa4.11□□□□□ -1.75
PRP40YKL012W YHR139C-AO13536 103 aa4.1□□□□□ -1.75
PRP40YKL012W PRY2P36110 329 aa4.1□□□□□ -1.75
PRP40YKL012W YGL159WP53110 370 aa4.1□□□□□ -1.75
PRP40YKL012W YLR030WQ07967 263 aa4.1□□□□□ -1.75
PRP40YKL012W GEP5Q12393 293 aa4.1□□□□□ -1.75
PRP40YKL012W ERV29P53337 310 aa4.09□□□□□ -1.75
PRP40YKL012W YDR248CQ03786 193 aa4.09□□□□□ -1.75
PRP40YKL012W INM2Q05533 292 aa4.09□□□□□ -1.76
PRP40YKL012W HTL1Q9URQ5 78 aa4.09□□□□□ -1.76
PRP40YKL012W ATP7P30902 174 aa4.08□□□□□ -1.76
PRP40YKL012W OAC1P32332 324 aa4.08□□□□□ -1.76
PRP40YKL012W MSA2P36157 363 aa4.08□□□□□ -1.76
PRP40YKL012W TRM5P38793 499 aa4.08□□□□□ -1.76
PRP40YKL012W YIL059CP40520 121 aa4.08□□□□□ -1.76
PRP40YKL012W PFS2P42841 465 aaKnown RBP4.08□□□□□ -1.76
PRP40YKL012W YML108WQ03759 105 aa4.08□□□□□ -1.76
PRP40YKL012W NKP2Q06162 153 aa4.08□□□□□ -1.76
PRP40YKL012W CDD1Q06549 142 aa4.08□□□□□ -1.76
PRP40YKL012W UTP10P42945 1769 aaKnown RBP4.08□□□□□ -1.76
PRP40YKL012W HIS3P06633 220 aa4.07□□□□□ -1.76
PRP40YKL012W GCN3P14741 305 aa4.07□□□□□ -1.76
PRP40YKL012W ERG24P32462 438 aaKnown RBP4.07□□□□□ -1.76
PRP40YKL012W SPS18P32572 300 aa4.07□□□□□ -1.76
PRP40YKL012W ECM14P38836 430 aa4.07□□□□□ -1.76
PRP40YKL012W FAR7P43592 221 aa4.07□□□□□ -1.76
PRP40YKL012W HOP2P53187 214 aa4.07□□□□□ -1.76
PRP40YKL012W CLP1Q08685 445 aaPredicted RBP4.07□□□□□ -1.76
PRP40YKL012W SGA1P08019 549 aa4.07□□□□□ -1.76
PRP40YKL012W YIL001WP40560 513 aa4.07□□□□□ -1.76
PRP40YKL012W RMR1P53060 241 aa4.07□□□□□ -1.76
PRP40YKL012W DID2P69771 204 aa4.07□□□□□ -1.76
PRP40YKL012W YML096WQ04489 525 aa4.07□□□□□ -1.76
PRP40YKL012W LSO2Q3E772 92 aaKnown RBP4.07□□□□□ -1.76
PRP40YKL012W RAD10P06838 210 aa4.06□□□□□ -1.76
PRP40YKL012W APS1P35181 156 aa4.06□□□□□ -1.76
PRP40YKL012W RCN1P36054 211 aa4.06□□□□□ -1.76
PRP40YKL012W GRE3P38715 327 aaKnown RBP RIP-Chip data4.06□□□□□ -1.76not detected
PRP40YKL012W GTR2P53290 341 aa4.06□□□□□ -1.76
PRP40YKL012W YMR279CQ03263 540 aa4.06□□□□□ -1.76
PRP40YKL012W YPL257WQ08974 193 aa4.06□□□□□ -1.76
PRP40YKL012W AGC1Q12482 902 aa4.06□□□□□ -1.76
PRP40YKL012W RPS23AP0CX29 145 aaKnown RBP4.05□□□□□ -1.76
PRP40YKL012W RPS23BP0CX30 145 aa4.05□□□□□ -1.76
PRP40YKL012W COS8P38723 381 aa4.05□□□□□ -1.76
PRP40YKL012W BUD13P46947 266 aaPredicted RBP4.05□□□□□ -1.76
PRP40YKL012W DIA1P54005 336 aa4.05□□□□□ -1.76
PRP40YKL012W ABF2Q02486 183 aa4.05□□□□□ -1.76
PRP40YKL012W GPM2Q12008 311 aa4.05□□□□□ -1.76
PRP40YKL012W RAD50P12753 1312 aa4.05□□□□□ -1.76
PRP40YKL012W RIM15P43565 1770 aa4.05□□□□□ -1.76
PRP40YKL012W RAD51P25454 400 aa4.04□□□□□ -1.76
PRP40YKL012W RPF1P38805 295 aaKnown RBP4.04□□□□□ -1.76
PRP40YKL012W RPA43P46669 326 aa4.04□□□□□ -1.76
PRP40YKL012W RSM10Q03201 203 aa4.04□□□□□ -1.76
PRP40YKL012W GRH1Q04410 372 aaKnown RBP4.04□□□□□ -1.76
PRP40YKL012W NIP7Q08962 181 aaKnown RBP4.04□□□□□ -1.76
PRP40YKL012W BBP1Q12365 385 aa4.04□□□□□ -1.76
PRP40YKL012W LYS2P07702 1392 aa4.04□□□□□ -1.76
PRP40YKL012W DSF1P0CX08 502 aa4.04□□□□□ -1.76
PRP40YKL012W YNR073CP0CX09 502 aa4.04□□□□□ -1.76
PRP40YKL012W MRPL28P36527 147 aa4.04□□□□□ -1.76
PRP40YKL012W MMS2P53152 137 aa4.04□□□□□ -1.76
PRP40YKL012W PRM8P53174 237 aa4.04□□□□□ -1.76
PRP40YKL012W YOR020W-AQ3E824 90 aa4.04□□□□□ -1.76
PRP40YKL012W ROM2P51862 1356 aaKnown RBP4.04□□□□□ -1.76
PRP40YKL012W YPT52P36018 234 aaKnown RBP4.03□□□□□ -1.76
PRP40YKL012W YGP1P38616 354 aaKnown RBP4.03□□□□□ -1.76
PRP40YKL012W EGD2P38879 174 aaKnown RBP4.03□□□□□ -1.76
PRP40YKL012W IES4Q08561 116 aa4.03□□□□□ -1.76
PRP40YKL012W SEC4P07560 215 aaKnown RBP4.02□□□□□ -1.77
PRP40YKL012W RSM25P40496 264 aa4.02□□□□□ -1.77
PRP40YKL012W OST2P46964 130 aa4.02□□□□□ -1.77
PRP40YKL012W AGA2P32781 87 aa4.02□□□□□ -1.77
PRP40YKL012W SEC72P39742 193 aaKnown RBP4.02□□□□□ -1.77
PRP40YKL012W YOR268CQ08734 132 aa4.02□□□□□ -1.77
PRP40YKL012W FAS2P19097 1887 aaKnown RBP4.01□□□□□ -1.77
PRP40YKL012W DOG2P38773 246 aa4.01□□□□□ -1.77
PRP40YKL012W DOG1P38774 246 aa4.01□□□□□ -1.77
PRP40YKL012W GON7P46984 123 aa4.01□□□□□ -1.77
PRP40YKL012W PET191Q02772 108 aa4.01□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms