RNA–Protein interactions for RNA: YJR060W

CBF1, Transcript of Basic helix-loop-helix (bHLH) protein, yeastyeast

Gene CBF1, Length 1,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF1YJR060W MRPL4P36517 319 aa4.47□□□□□ -1.69
CBF1YJR060W MBA1P38300 278 aa4.47□□□□□ -1.69
CBF1YJR060W ECM14P38836 430 aa4.47□□□□□ -1.69
CBF1YJR060W SYG1P40528 902 aa4.47□□□□□ -1.69
CBF1YJR060W SBH2P52871 88 aa4.47□□□□□ -1.69
CBF1YJR060W POP6P53218 158 aa4.47□□□□□ -1.69
CBF1YJR060W CTF19Q02732 369 aa4.47□□□□□ -1.69
CBF1YJR060W YPL077CQ02831 240 aa4.47□□□□□ -1.69
CBF1YJR060W YDR248CQ03786 193 aa4.47□□□□□ -1.69
CBF1YJR060W PIN3Q06449 215 aa4.47□□□□□ -1.69
CBF1YJR060W TMC1Q08422 150 aaPredicted RBP4.47□□□□□ -1.69
CBF1YJR060W TIR4Q12218 487 aaPredicted RBP4.47□□□□□ -1.69
CBF1YJR060W Q0297Q9ZZV8 51 aa4.47□□□□□ -1.69
CBF1YJR060W HXT2P23585 541 aa4.46□□□□□ -1.7
CBF1YJR060W RFA3P26755 122 aaKnown RBP4.46□□□□□ -1.7
CBF1YJR060W ERG24P32462 438 aaKnown RBP4.46□□□□□ -1.7
CBF1YJR060W NAT2P37293 288 aa4.46□□□□□ -1.7
CBF1YJR060W YBR137WP38276 179 aa4.46□□□□□ -1.7
CBF1YJR060W PAM16P42949 149 aa4.46□□□□□ -1.7
CBF1YJR060W NSA1P53136 463 aaPredicted RBP4.46□□□□□ -1.7
CBF1YJR060W RNH201P53942 307 aa4.46□□□□□ -1.7
CBF1YJR060W MSS11Q03825 758 aa4.46□□□□□ -1.7
CBF1YJR060W YMR254CQ04838 102 aa4.46□□□□□ -1.7
CBF1YJR060W YTH1Q06102 208 aaPredicted RBP4.46□□□□□ -1.7
CBF1YJR060W YLR112WQ12130 139 aa4.46□□□□□ -1.7
CBF1YJR060W GEP5Q12393 293 aa4.46□□□□□ -1.7
CBF1YJR060W UTP20P35194 2493 aaKnown RBP4.45□□□□□ -1.7
CBF1YJR060W HIS3P06633 220 aa4.45□□□□□ -1.7
CBF1YJR060W MSI1P13712 422 aa4.45□□□□□ -1.7
CBF1YJR060W HOM6P31116 359 aaKnown RBP4.45□□□□□ -1.7
CBF1YJR060W UTP11P34247 250 aaPredicted RBP4.45□□□□□ -1.7
CBF1YJR060W YND1P40009 630 aa4.45□□□□□ -1.7
CBF1YJR060W FCY21P40039 528 aa4.45□□□□□ -1.7
CBF1YJR060W SYS1P41544 203 aa4.45□□□□□ -1.7
CBF1YJR060W GLR1P41921 483 aaKnown RBP4.45□□□□□ -1.7
CBF1YJR060W GNA1P43577 159 aaPredicted RBP4.45□□□□□ -1.7
CBF1YJR060W HNT1Q04344 158 aaKnown RBP4.45□□□□□ -1.7
CBF1YJR060W NMA1Q06178 401 aaKnown RBP4.45□□□□□ -1.7
CBF1YJR060W ASR1Q06834 288 aa4.45□□□□□ -1.7
CBF1YJR060W YOR186WQ08560 144 aa4.45□□□□□ -1.7
CBF1YJR060W ATG41Q12048 136 aa4.45□□□□□ -1.7
CBF1YJR060W MSH5Q12175 901 aa4.45□□□□□ -1.7
CBF1YJR060W HUT1Q12520 339 aa4.45□□□□□ -1.7
CBF1YJR060W TDH2P00358 332 aaKnown RBP4.44□□□□□ -1.7
CBF1YJR060W RPS18AP0CX55 146 aaKnown RBP4.44□□□□□ -1.7
CBF1YJR060W RPS18BP0CX56 146 aaPredicted RBP4.44□□□□□ -1.7
CBF1YJR060W RPS2P25443 254 aaKnown RBP4.44□□□□□ -1.7
CBF1YJR060W PEX4P29340 183 aa4.44□□□□□ -1.7
CBF1YJR060W YER079WP40052 210 aaKnown RBP4.44□□□□□ -1.7
CBF1YJR060W AIM20P40451 204 aa4.44□□□□□ -1.7
CBF1YJR060W YIL012WP40551 113 aa4.44□□□□□ -1.7
CBF1YJR060W MRX5P47007 382 aa4.44□□□□□ -1.7
CBF1YJR060W YJR011CP47086 261 aaPredicted RBP4.44□□□□□ -1.7
CBF1YJR060W SSN8P47821 323 aa4.44□□□□□ -1.7
CBF1YJR060W UFD1P53044 361 aa4.44□□□□□ -1.7
CBF1YJR060W GIM3P53900 129 aa4.44□□□□□ -1.7
CBF1YJR060W UPS1Q05776 175 aa4.44□□□□□ -1.7
CBF1YJR060W YLR283WQ05867 314 aa4.44□□□□□ -1.7
CBF1YJR060W PHO92Q06390 306 aa4.44□□□□□ -1.7
CBF1YJR060W HEM25Q07534 307 aa4.44□□□□□ -1.7
CBF1YJR060W YFH1Q07540 174 aa4.44□□□□□ -1.7
CBF1YJR060W FCY22Q12119 530 aa4.44□□□□□ -1.7
CBF1YJR060W YOR097CQ12274 175 aaPredicted RBP4.44□□□□□ -1.7
CBF1YJR060W DCP1Q12517 231 aaPredicted RBP4.44□□□□□ -1.7
CBF1YJR060W CDC28P00546 298 aaKnown RBP4.43□□□□□ -1.7
CBF1YJR060W PET18P25362 215 aa4.43□□□□□ -1.7
CBF1YJR060W YCR101CP25607 182 aa4.43□□□□□ -1.7
CBF1YJR060W YBL010CP32788 280 aa4.43□□□□□ -1.7
CBF1YJR060W YOX1P34161 385 aa4.43□□□□□ -1.7
CBF1YJR060W SOR1P35497 357 aaKnown RBP4.43□□□□□ -1.7
CBF1YJR060W PHD1P36093 366 aa4.43□□□□□ -1.7
CBF1YJR060W UMP1P38293 148 aa4.43□□□□□ -1.7
CBF1YJR060W PRS2P38620 318 aaKnown RBP4.43□□□□□ -1.7
CBF1YJR060W RRF1P38771 230 aa4.43□□□□□ -1.7
CBF1YJR060W FLO5P38894 1075 aa4.43□□□□□ -1.7
CBF1YJR060W YIL024CP40543 189 aa4.43□□□□□ -1.7
CBF1YJR060W SAS2P40963 338 aa4.43□□□□□ -1.7
CBF1YJR060W ABM1P47146 123 aa4.43□□□□□ -1.7
CBF1YJR060W XPT1P47165 209 aa4.43□□□□□ -1.7
CBF1YJR060W BXI1P48558 297 aa4.43□□□□□ -1.7
CBF1YJR060W MRH4P53166 561 aa4.43□□□□□ -1.7
CBF1YJR060W GEP7P53171 287 aa4.43□□□□□ -1.7
CBF1YJR060W VHT1P53241 593 aa4.43□□□□□ -1.7
CBF1YJR060W YNR064CP53750 290 aa4.43□□□□□ -1.7
CBF1YJR060W YIF1P53845 314 aaKnown RBP4.43□□□□□ -1.7
CBF1YJR060W ECM18Q04623 453 aa4.43□□□□□ -1.7
CBF1YJR060W MRPL35Q06678 367 aa4.43□□□□□ -1.7
CBF1YJR060W SNA4Q07549 140 aa4.43□□□□□ -1.7
CBF1YJR060W SOR2Q07786 357 aa4.43□□□□□ -1.7
CBF1YJR060W RPL39P04650 51 aa4.42□□□□□ -1.7
CBF1YJR060W APA2P22108 325 aa4.42□□□□□ -1.7
CBF1YJR060W RIB7P33312 244 aa4.42□□□□□ -1.7
CBF1YJR060W GPI18P38211 433 aa4.42□□□□□ -1.7
CBF1YJR060W HTD2P38790 280 aaKnown RBP4.42□□□□□ -1.7
CBF1YJR060W IPI1P38803 334 aaPredicted RBP4.42□□□□□ -1.7
CBF1YJR060W RMD6P39975 231 aa4.42□□□□□ -1.7
CBF1YJR060W NCA3P46955 337 aa4.42□□□□□ -1.7
CBF1YJR060W GPI14P47088 403 aaKnown RBP4.42□□□□□ -1.7
CBF1YJR060W PHB2P50085 310 aa4.42□□□□□ -1.7
CBF1YJR060W ERV29P53337 310 aa4.42□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms