RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 APEX2Q9UBZ4 518 aa18.8■□□□□ 0.6
PHGDH-230ENST00000641927 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-230ENST00000641927 TDRD15B5MCY1 1934 aaKnown RBP18.8■□□□□ 0.6
PHGDH-230ENST00000641927 GOLGA6L6A8MZA4 724 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 PPEF2O14830 753 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 EPHB6O15197 1021 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 DGKIO75912 1065 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 TPM1P09493 284 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 DEKP35659 375 aaKnown RBP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 CLCNKBP51801 687 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 POLR2FP61218 127 aaKnown RBP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 NOP14P78316 857 aaKnown RBP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 KLHDC7AQ5VTJ3 777 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 GJB7Q6PEY0 223 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 RRAGAQ7L523 313 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ZNF280BQ86YH2 543 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 CXorf38Q8TB03 319 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 HERVK_113Q902F9 699 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 SIX2Q9NPC8 291 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 UBE2TQ9NPD8 197 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 SLC4A7Q9Y6M7 1214 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 PODXLO00592 558 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ZC3H11AO75152 810 aaKnown RBP eCLIP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 DDHD2O94830 711 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ASS1P00966 412 aaKnown RBP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ATICP31939 592 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 WDR72Q3MJ13 1102 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 PHLDB3Q6NSJ2 640 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ARHGEF19Q8IW93 802 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 LRRC43Q8N309 656 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 TATDN2Q93075 761 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 YME1L1Q96TA2 773 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ZBED2Q9BTP6 218 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 NLRC4Q9NPP4 1024 aa18.79■□□□□ 0.6
PHGDH-230ENST00000641927 NXF1Q9UBU9 619 aaKnown RBP18.79■□□□□ 0.6
PHGDH-230ENST00000641927 ANO9A1A5B4 782 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 PIRO00625 290 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 NOL4O94818 638 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 GYPCP04921 128 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 UCHL3P15374 230 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 LRPAP1P30533 357 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 RPL9P32969 192 aaKnown RBP18.78■□□□□ 0.6
PHGDH-230ENST00000641927 RAPGEF1Q13905 1077 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 TRIM14Q14142 442 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 ZNF667Q5HYK9 610 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 LRRC52Q8N7C0 313 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 RSPH1Q8WYR4 309 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 TAF4BQ92750 862 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 ZNF560Q96MR9 790 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 PAAF1Q9BRP4 392 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 XYLT2Q9H1B5 865 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 GANQ9H2C0 597 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 APOBEC3GQ9HC16 384 aaKnown RBP18.78■□□□□ 0.6
PHGDH-230ENST00000641927 DNAJC12Q9UKB3 198 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 NUB1Q9Y5A7 615 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 FHOD1Q9Y613 1164 aa18.78■□□□□ 0.6
PHGDH-230ENST00000641927 CAPN15O75808 1086 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 CASP14P31944 242 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 PNPLA4P41247 253 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 OR1G1P47890 313 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 UPP1Q16831 310 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 IQCEQ6IPM2 695 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 SCARA5Q6ZMJ2 495 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 DDX27Q96GQ7 796 aaKnown RBP18.77■□□□□ 0.6
PHGDH-230ENST00000641927 UROC1Q96N76 676 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 CEP72Q9P209 647 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 HCSTQ9UBK5 93 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 DNAJB4Q9UDY4 337 aa18.77■□□□□ 0.6
PHGDH-230ENST00000641927 B3GAT3O94766 335 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 ATP2A2P16615 1042 aaKnown RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 TAF6P49848 677 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 TNNC1P63316 161 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 DSC1Q08554 894 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 CCDC173Q0VFZ6 552 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 BTG3Q14201 252 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 ARHGAP44Q17R89 818 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 SV2CQ496J9 727 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 FIGNQ5HY92 759 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 SPOUT1Q5T280 376 aaKnown RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 DPY19L2P1Q6NXN4 242 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 COLGALT2Q8IYK4 626 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 ZNF397Q8NF99 534 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 IQCDQ96DY2 449 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 SPAG5Q96R06 1193 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 MMS19Q96T76 1030 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 NIF3L1Q9GZT8 377 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 NRDE2Q9H7Z3 1164 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 IMPACTQ9P2X3 320 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 POLIQ9UNA4 740 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 LUC7L2Q9Y383 392 aaKnown RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 B4GALT3O60512 393 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 GJB5O95377 273 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 PTMAP06454 111 aaKnown RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 P4HA1P13674 534 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 FXR1P51114 621 aaKnown RBP eCLIP18.76■□□□□ 0.596e-7■■■■□ 19.4
PHGDH-230ENST00000641927 MFAP3P55082 362 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 GOLGA8FQ08AF8 430 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 GOLGA8DPQ0D2H9 430 aa18.76■□□□□ 0.59
PHGDH-230ENST00000641927 TBX2Q13207 712 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-230ENST00000641927 C9orf50Q5SZB4 431 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms