RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
PHGDH-227ENST00000641811 SUSD6Q92537 303 aa18.78■□□□□ 0.6
PHGDH-227ENST00000641811 TSPAN18Q96SJ8 248 aa18.78■□□□□ 0.6
PHGDH-227ENST00000641811 MAN1C1Q9NR34 630 aa18.78■□□□□ 0.6
PHGDH-227ENST00000641811 AGPAT3Q9NRZ7 376 aa18.78■□□□□ 0.6
PHGDH-227ENST00000641811 RBAKQ9NYW8 714 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-227ENST00000641811 DERAQ9Y315 318 aa18.78■□□□□ 0.6
PHGDH-227ENST00000641811 TGM5O43548 720 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 IL18RAPO95256 599 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 LDHAP00338 332 aaKnown RBP18.77■□□□□ 0.6
PHGDH-227ENST00000641811 MYL1P05976 194 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 POU5F1Q01860 360 aaKnown RBP18.77■□□□□ 0.6
PHGDH-227ENST00000641811 CREMQ03060 361 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 ZP2Q05996 745 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 BMT2Q1RMZ1 405 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 LILRA6Q6PI73 481 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 CBWD2Q8IUF1 395 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 ADHFE1Q8IWW8 467 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 GPD1LQ8N335 351 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 ENGASEQ8NFI3 743 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 SUSD3Q96L08 255 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 ADAM7Q9H2U9 754 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 HSPBP1Q9NZL4 362 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 MTRRQ9UBK8 725 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 C2CD2Q9Y426 696 aa18.77■□□□□ 0.6
PHGDH-227ENST00000641811 UBE4BO95155 1302 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 SPDYE4A6NLX3 237 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 TNFRSF10AO00220 468 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 OR1D2P34982 312 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 CYP2J2P51589 502 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 PSMD2Q13200 908 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 SNW1Q13573 536 aaKnown RBP18.76■□□□□ 0.59
PHGDH-227ENST00000641811 CBX2Q14781 532 aaPredicted RBP18.76■□□□□ 0.59
PHGDH-227ENST00000641811 VARS2Q5ST30 1063 aaKnown RBP18.76■□□□□ 0.59
PHGDH-227ENST00000641811 C9orf57Q5W0N0 161 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 PDE11AQ9HCR9 933 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 DPP3Q9NY33 737 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 CHMP5Q9NZZ3 219 aa18.76■□□□□ 0.59
PHGDH-227ENST00000641811 ANO9A1A5B4 782 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 SPTLC1O15269 473 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 GADD45BO75293 160 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-227ENST00000641811 RFPL2O75678 378 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 SSTR3P32745 418 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-227ENST00000641811 TFAMQ00059 246 aaKnown RBP18.75■□□□□ 0.59
PHGDH-227ENST00000641811 ITIH3Q06033 890 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 KNOP1Q1ED39 458 aaKnown RBP18.75■□□□□ 0.59
PHGDH-227ENST00000641811 SCARA3Q6AZY7 606 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 CES5AQ6NT32 575 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 PDXDC1Q6P996 788 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 ANKS3Q6ZW76 656 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 GJD3Q8N144 294 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 RDH13Q8NBN7 331 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 KREMEN2Q8NCW0 462 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 SFXN1Q9H9B4 322 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 PRKAG3Q9UGI9 489 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 TIMM13Q9Y5L4 95 aaPredicted RBP18.75■□□□□ 0.59
PHGDH-227ENST00000641811 CDY1Q9Y6F8 540 aa18.75■□□□□ 0.59
PHGDH-227ENST00000641811 NCOR1O75376 2440 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 M0QZQ0 153 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 PIRO00625 290 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 SYN3O14994 580 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 KIAA0391O15091 583 aaKnown RBP18.74■□□□□ 0.59
PHGDH-227ENST00000641811 LILRA4P59901 499 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 FAM160A1Q05DH4 1040 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 PNOCQ13519 176 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 LMBRD2Q68DH5 695 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-227ENST00000641811 HS2ST1Q7LGA3 356 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 KHSRPQ92945 711 aaKnown RBP eCLIP18.74■□□□□ 0.59
PHGDH-227ENST00000641811 PHF7Q9BWX1 381 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-227ENST00000641811 POMKQ9H5K3 350 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 PCDHB8Q9UN66 801 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.74■□□□□ 0.59
PHGDH-227ENST00000641811 BACE2Q9Y5Z0 518 aa18.74■□□□□ 0.59
PHGDH-227ENST00000641811 CCDC195A0A1B0GUA6 201 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 C19orf67A6NJJ6 358 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 ZNF233A6NK53 670 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 RHOBTB3O94955 611 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 SP100P23497 879 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-227ENST00000641811 AARSP49588 968 aaKnown RBP eCLIP18.73■□□□□ 0.59
PHGDH-227ENST00000641811 ARPP19P56211 112 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 RAB33AQ14088 237 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 MRPL58Q14197 206 aaKnown RBP18.73■□□□□ 0.59
PHGDH-227ENST00000641811 DSTYKQ6XUX3 929 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 GPR149Q86SP6 731 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 ERCC4Q92889 916 aaPredicted RBP18.73■□□□□ 0.59
PHGDH-227ENST00000641811 RPGRIP1Q96KN7 1286 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 PLEKHA4Q9H4M7 779 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 MAPK8IP1Q9UQF2 711 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 PTPRJQ12913 1337 aa18.73■□□□□ 0.59
PHGDH-227ENST00000641811 TBC1D4O60343 1298 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 MTHFRP42898 656 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 SNRPFP62306 86 aaKnown RBP18.72■□□□□ 0.59
PHGDH-227ENST00000641811 SNRNP35Q16560 246 aaKnown RBP18.72■□□□□ 0.59
PHGDH-227ENST00000641811 CTXN3Q4LDR2 81 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 ATAT1Q5SQI0 421 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 NT5DC4Q86YG4 428 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 C1orf127Q8N9H9 656 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 XXYLT1Q8NBI6 393 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 APPL2Q8NEU8 664 aa18.72■□□□□ 0.59
PHGDH-227ENST00000641811 CCDC47Q96A33 483 aaKnown RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms