RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 PNMA8AQ86V59 439 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-226ENST00000641756 GTF3C2Q8WUA4 911 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-226ENST00000641756 BRI3BPQ8WY22 251 aa19.08■□□□□ 0.64
PHGDH-226ENST00000641756 PTPRHQ9HD43 1115 aa19.08■□□□□ 0.64
PHGDH-226ENST00000641756 UTP11Q9Y3A2 253 aaKnown RBP19.08■□□□□ 0.64
PHGDH-226ENST00000641756 PCDHA3Q9Y5H8 950 aa19.08■□□□□ 0.64
PHGDH-226ENST00000641756 TCRBV7S2A1N4TA0A589 114 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 HOXC6P09630 235 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 AP3M2P53677 418 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 NOMO3P69849 1222 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 GRM1Q13255 1194 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 LAMC2Q13753 1193 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 DUOXA2Q1HG44 320 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 MON1BQ7L1V2 547 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 EFCAB13Q8IY85 973 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 TMEM192Q8IY95 271 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 MREGQ8N565 214 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 GOLGA6L1Q8N7Z2 621 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 AFG1LQ8WV93 481 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 PIK3R5Q8WYR1 880 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 C18orf8Q96DM3 657 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 SH3GL2Q99962 352 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 CNTN6Q9UQ52 1028 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-226ENST00000641756 GH1P01241 217 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 PRELID2Q8N945 189 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 AVENQ9NQS1 362 aaPredicted RBP19.07■□□□□ 0.64
PHGDH-226ENST00000641756 PSD3Q9NYI0 1048 aa19.07■□□□□ 0.64
PHGDH-226ENST00000641756 OPA1O60313 960 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 TMEM191BP0C7N4 346 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 MYBL1P10243 752 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 FLT3P36888 993 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 RWDD2BP57060 319 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 TRPC3Q13507 836 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 CLUL1Q15846 466 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 ZNF394Q53GI3 561 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 DAB2IPQ5VWQ8 1189 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 SCARA5Q6ZMJ2 495 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 IQCKQ8N0W5 287 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 TMEM130Q8N3G9 435 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 UBR7Q8N806 425 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 EIF1ADQ8N9N8 165 aaKnown RBP19.06■□□□□ 0.64
PHGDH-226ENST00000641756 ARL8AQ96BM9 186 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 TRIM11Q96F44 468 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 CDT1Q9H211 546 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.06■□□□□ 0.64
PHGDH-226ENST00000641756 IVNS1ABPQ9Y6Y0 642 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 GOLGA6CA6NDK9 693 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 PHF2O75151 1096 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 KRT14P02533 472 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 GOLGA6DP0CG33 693 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 HSPA9P38646 679 aaKnown RBP19.06■□□□□ 0.64
PHGDH-226ENST00000641756 GTF2A2P52657 109 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 ZNF484Q5JVG2 852 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 MMS22LQ6ZRQ5 1243 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 IFT122Q9HBG6 1241 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 VTA1Q9NP79 307 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 GOLGA6AQ9NYA3 693 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 ADAM22Q9P0K1 906 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 PRDM4Q9UKN5 801 aa19.06■□□□□ 0.64
PHGDH-226ENST00000641756 A0A087WZ62 844 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 ECM2O94769 699 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-226ENST00000641756 CXCL8P10145 99 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 ZNF132P52740 706 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 SURF1Q15526 300 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 PPP2R5EQ16537 467 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 TTMPQ5BVD1 217 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 TRIM72Q6ZMU5 477 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 SLC13A5Q86YT5 568 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-226ENST00000641756 ZNF606Q8WXB4 792 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.05■□□□□ 0.64
PHGDH-226ENST00000641756 SEC14L1Q92503 715 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 MAGOHBQ96A72 148 aaKnown RBP19.05■□□□□ 0.64
PHGDH-226ENST00000641756 FDXACB1Q9BRP7 624 aaPredicted RBP19.05■□□□□ 0.64
PHGDH-226ENST00000641756 AKT3Q9Y243 479 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 MGAMO43451 1857 aa19.05■□□□□ 0.64
PHGDH-226ENST00000641756 GOLGA8KD6RF30 607 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 ASAP2O43150 1006 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 GJB6O95452 261 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 SNAI1O95863 264 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-226ENST00000641756 VTNP04004 478 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 WEE2P0C1S8 567 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 SGSM1Q2NKQ1 1148 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 TTC27Q6P3X3 843 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 JAMLQ86YT9 394 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 PPTC7Q8NI37 304 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 NIF3L1Q9GZT8 377 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 KATNBL1Q9H079 304 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 RAB17Q9H0T7 212 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 FAM114A2Q9NRY5 505 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 GPR25O00155 361 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 MYO1FO00160 1098 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 HSPA6P17066 643 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 BRD2P25440 801 aaKnown RBP19.04■□□□□ 0.64
PHGDH-226ENST00000641756 ZNF699Q32M78 642 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 LIN9Q5TKA1 542 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 CISHQ9NSE2 258 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 TNFSF13BQ9Y275 285 aa19.04■□□□□ 0.64
PHGDH-226ENST00000641756 ANK1P16157 1881 aa19.03■□□□□ 0.64
PHGDH-226ENST00000641756 TNNC2P02585 160 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms