RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PTPN14Q15678 1187 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 DUOXA2Q1HG44 320 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 ASTE1Q2TB18 679 aaPredicted RBP14.11□□□□□ -0.15
PHGDH-221ENST00000641573 WDR44Q5JSH3 913 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 RASIP1Q5U651 963 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 SLC27A1Q6PCB7 646 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 NYAP1Q6ZVC0 841 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 ZNF365Q70YC5 407 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 C16orf59Q7L2K0 433 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 RPAINQ86UA6 219 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 FMNL3Q8IVF7 1028 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 PPM1KQ8N3J5 372 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 HELQQ8TDG4 1101 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 KAT5Q92993 513 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 TATDN2Q93075 761 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 ACAP3Q96P50 834 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 PI4K2AQ9BTU6 479 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 NKX2-4Q9H2Z4 354 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 HAUS4Q9H6D7 363 aa14.11□□□□□ -0.15
PHGDH-221ENST00000641573 BZW2Q9Y6E2 419 aaKnown RBP14.11□□□□□ -0.15
PHGDH-221ENST00000641573 FOXN3O00409 490 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TLR3O15455 904 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 MEFVO15553 781 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 IPO7O95373 1038 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TNNC2P02585 160 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 CTSHP09668 335 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TMEM191BP0C7N4 346 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 ACRP10323 421 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TNNT1P13805 278 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TFAMQ00059 246 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TFF2Q03403 129 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 MGAT3Q09327 533 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 PTK7Q13308 1070 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 NCOA4Q13772 614 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 SPA17Q15506 151 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 SLC10A6Q3KNW5 377 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 DNTTIP2Q5QJE6 756 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TRAPPC11Q7Z392 1133 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 FAM228AQ86W67 206 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 EFCAB13Q8IY85 973 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 ELMO3Q96BJ8 720 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 ANKRD36BP1Q96IX9 119 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 FAM81BQ96LP2 452 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 KREMEN1Q96MU8 473 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 CCDC94Q9BW85 323 aaPredicted RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 EIF2AQ9BY44 585 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 PPP1R12CQ9BZL4 782 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 MTMR12Q9C0I1 747 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 ASB7Q9H672 318 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 C1orf112Q9NSG2 853 aa14.1□□□□□ -0.15
PHGDH-221ENST00000641573 PIN4Q9Y237 131 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 NOC2LQ9Y3T9 749 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TCF20Q9UGU0 1960 aaKnown RBP14.1□□□□□ -0.15
PHGDH-221ENST00000641573 TRIP12Q14669 1992 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-221ENST00000641573 A0A0U1RQJ8 604 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 ZNF263O14978 683 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 OFD1O75665 1012 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 LCA5LO95447 670 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 CHRNA1P02708 482 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 CCDC172P0C7W6 258 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 THPOP40225 353 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 KCNQ1P51787 676 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 PTK2Q05397 1052 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 PPP2R2DQ66LE6 453 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 ENOSF1Q7L5Y1 443 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 ZNF571Q7Z3V5 609 aaPredicted RBP14.09□□□□□ -0.15
PHGDH-221ENST00000641573 ATRIPQ8WXE1 791 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 HERVK_113Q902F9 699 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 EPHX3Q9H6B9 360 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 TRMT13Q9NUP7 481 aaKnown RBP14.09□□□□□ -0.15
PHGDH-221ENST00000641573 SNTG2Q9NY99 539 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 NOD1Q9Y239 953 aa14.09□□□□□ -0.15
PHGDH-221ENST00000641573 A0A0U1RQG5 324 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 KIF2AO00139 706 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 RPS6KA5O75582 802 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 FGBP02675 491 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 NFICP08651 508 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 ANXA13P27216 316 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 CYP27A1Q02318 531 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 GCNT1Q02742 428 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 GFPT1Q06210 699 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 TRPC3Q13507 836 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 UBXN11Q5T124 520 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 SCARA3Q6AZY7 606 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 JADE1Q6IE81 842 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 SPOPLQ6IQ16 392 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 KIAA1328Q86T90 577 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 CD302Q8IX05 232 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 SLC43A3Q8NBI5 491 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 SHC3Q92529 594 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 DHX38Q92620 1227 aaKnown RBP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 TRIM6Q9C030 488 aaPredicted RBP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 APOBEC3GQ9HC16 384 aaKnown RBP14.08□□□□□ -0.16
PHGDH-221ENST00000641573 IL23AQ9NPF7 189 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 LZTFL1Q9NQ48 299 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 PCDHA13Q9Y5I0 950 aa14.08□□□□□ -0.16
PHGDH-221ENST00000641573 XIRP2A4UGR9 3374 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 CLSTN1O94985 981 aa14.07□□□□□ -0.16
PHGDH-221ENST00000641573 CST3P01034 146 aaPredicted RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms