RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 HIC1Q14526 733 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 RPS6KA1Q15418 735 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 CCDC181Q5TID7 509 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 SLC27A1Q6PCB7 646 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 C2CD2Q9Y426 696 aa17.6■□□□□ 0.41
PHGDH-216ENST00000641375 UMODL1Q5DID0 1318 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 NFICP08651 508 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 PAFAH1B1P43034 410 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 YWHAEP62258 255 aaKnown RBP17.59■□□□□ 0.41
PHGDH-216ENST00000641375 NKX3-2P78367 333 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 ITIH3Q06033 890 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 SLC10A6Q3KNW5 377 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 JADE1Q6IE81 842 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 ACAD10Q6JQN1 1059 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 TAF2Q6P1X5 1199 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 ZNF572Q7Z3I7 529 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-216ENST00000641375 PEX26Q7Z412 305 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 RBBP8NLQ8NC74 664 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-216ENST00000641375 COG1Q8WTW3 980 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 XYLT2Q9H1B5 865 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 OSGEPQ9NPF4 335 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 ARGLU1Q9NWB6 273 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-216ENST00000641375 SCN10AQ9Y5Y9 1956 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 CES2O00748 559 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 FGFR4P22455 802 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 GNA15P30679 374 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 HOXA11P31270 313 aaPredicted RBP17.59■□□□□ 0.41
PHGDH-216ENST00000641375 CLEC16AQ2KHT3 1053 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 TRIM72Q6ZMU5 477 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 UBR7Q8N806 425 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 PPP1R13LQ8WUF5 828 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 ARHGEF26Q96DR7 871 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 CFHR5Q9BXR6 569 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 CDHR5Q9HBB8 845 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 CREBZFQ9NS37 354 aa17.59■□□□□ 0.41
PHGDH-216ENST00000641375 RALGAPA2Q2PPJ7 1873 aa17.58■□□□□ 0.41
PHGDH-216ENST00000641375 MYADML2A6NDP7 307 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 KRT19P08727 400 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 ATICP31939 592 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 CXCR5P32302 372 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 CACNB2Q08289 660 aaPredicted RBP17.58■□□□□ 0.4
PHGDH-216ENST00000641375 SLC20A2Q08357 652 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 TMEM132DQ14C87 1099 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 CFAP221Q4G0U5 840 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 PPP1R2P3Q6NXS1 205 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 C1orf127Q8N9H9 656 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 PSMB7Q99436 277 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 PLEKHA5Q9HAU0 1116 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 CTTNBP2NLQ9P2B4 639 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 GTF3C4Q9UKN8 822 aa17.58■□□□□ 0.4
PHGDH-216ENST00000641375 KIF4AO95239 1232 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 UNGP13051 313 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 CRYBB1P53674 252 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF200P98182 395 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 SNX17Q15036 470 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 OGFRQ9NZT2 677 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 AMFRQ9UKV5 643 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 MEFVO15553 781 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 BUB1BO60566 1050 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 MTA2O94776 668 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 NPTXRO95502 500 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 H2AFXP16104 143 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 HOXD10P28358 340 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF132P52740 706 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF667Q5HYK9 610 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 SCARA3Q6AZY7 606 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 TRIM11Q96F44 468 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 CISHQ9NSE2 258 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 SIX4Q9UIU6 781 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 ITGA11Q9UKX5 1188 aa17.57■□□□□ 0.4
PHGDH-216ENST00000641375 PACSIN2Q9UNF0 486 aaPredicted RBP17.57■□□□□ 0.4
PHGDH-216ENST00000641375 PDE2AO00408 941 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 PGK1P00558 417 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 ITGB3P05106 788 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 CYP1A2P05177 515 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 TUBBP07437 444 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 ASPAP45381 313 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 YARSP54577 528 aaKnown RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 FBXO38Q6PIJ6 1188 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 NT5DC3Q86UY8 548 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 PBKQ96KB5 322 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 TRIM6Q9C030 488 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 VRTNQ9H8Y1 702 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 ABCB6Q9NP58 842 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 UVRAGQ9P2Y5 699 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 GTF2IRD1Q9UHL9 959 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 DERAQ9Y315 318 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 CYP1A1P04798 512 aaPredicted RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 RPLP2P05387 115 aaKnown RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 MYBL1P10243 752 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 P4HA1P13674 534 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 NSFP46459 744 aaKnown RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 CENPCQ03188 943 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 WDR72Q3MJ13 1102 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 C11orf63Q6NUN7 778 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 CXCL17Q6UXB2 119 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 NOA1Q8NC60 698 aaKnown RBP17.56■□□□□ 0.4
PHGDH-216ENST00000641375 MSANTD4Q8NCY6 345 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 ZNF653Q96CK0 615 aa17.56■□□□□ 0.4
PHGDH-216ENST00000641375 SELENOOQ9BVL4 669 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms