RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 KPNA1P52294 538 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 EPHA5P54756 1037 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 CYP4A11Q02928 519 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 SOX4Q06945 474 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 TNK2Q07912 1038 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 NCBP1Q09161 790 aaKnown RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 FCHO2Q0JRZ9 810 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 ELAVL2Q12926 359 aaKnown RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 MXD4Q14582 209 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 UPP1Q16831 310 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 INF2Q27J81 1249 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 DGKKQ5KSL6 1271 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 RNF20Q5VTR2 975 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 C19orf48Q6RUI8 117 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 SDK1Q7Z5N4 2213 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 EXOC8Q8IYI6 725 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 HACE1Q8IYU2 909 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 TMEM130Q8N3G9 435 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 SNX21Q969T3 373 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 BBC3Q96PG8 261 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 PPP1R10Q96QC0 940 aaKnown RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 SLC26A6Q9BXS9 759 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 NFKBIZQ9BYH8 718 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 SLKQ9H2G2 1235 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 FZD8Q9H461 694 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 PDZD7Q9H5P4 517 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 C8orf33Q9H7E9 229 aaPredicted RBP10.71□□□□□ -0.69
PHGDH-212ENST00000641247 ZMYM2Q9UBW7 1377 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 KLK13Q9UKR3 277 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 PCDHA4Q9UN74 947 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 PCDHGA5Q9Y5G8 931 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 SNX14Q9Y5W7 946 aa10.71□□□□□ -0.69
PHGDH-212ENST00000641247 ANKRD11Q6UB99 2663 aaPredicted RBP10.71□□□□□ -0.7
PHGDH-212ENST00000641247 LNP1A1A4G5 178 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 PATE3B3GLJ2 98 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 PRRG1O14668 218 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 PRKCBP05771 671 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 TPM2P07951 284 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CCDC192P0DO97 292 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 RCAN1P53805 252 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 NLRP5P59047 1200 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CACNB1Q02641 598 aaPredicted RBP10.7□□□□□ -0.7
PHGDH-212ENST00000641247 TWF1Q12792 350 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 TFDP1Q14186 410 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 MRPL58Q14197 206 aaKnown RBP10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CYP4A22Q5TCH4 519 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 Q6ZUG5 572 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 ANKS3Q6ZW76 656 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 MAEAQ7L5Y9 396 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 OTUD6AQ7L8S5 288 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CSGALNACT1Q8TDX6 532 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 AIFM3Q96NN9 605 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CRISPLD1Q9H336 500 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 FBRSL1Q9HCM7 1045 aaKnown RBP10.7□□□□□ -0.7
PHGDH-212ENST00000641247 GDAQ9Y2T3 454 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 VWA8A3KMH1 1905 aa10.7□□□□□ -0.7
PHGDH-212ENST00000641247 CCDC163A0A0D9SF12 145 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 A0A1W2PRU2 124 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 OTOL1A6NHN0 477 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-212ENST00000641247 CAVIN2O95810 425 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 CEACAM1P13688 526 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 ELF1P32519 619 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 TSGA10IPQ3SY00 556 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 FSTL4Q6MZW2 842 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 MOXD1Q6UVY6 613 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 PPP4R3CPQ6ZMV5 832 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 RALGPS2Q86X27 583 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-212ENST00000641247 TMC8Q8IU68 726 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 ARID3BQ8IVW6 561 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-212ENST00000641247 TPH2Q8IWU9 490 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 BLIDQ8IZY5 108 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 DEFB124Q8NES8 71 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 CCDC148Q8NFR7 591 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 BSNDQ8WZ55 320 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 BRF1Q92994 677 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 RNF26Q9BY78 433 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-212ENST00000641247 POLR3FQ9H1D9 316 aaPredicted RBP10.69□□□□□ -0.7
PHGDH-212ENST00000641247 DNAJC25Q9H1X3 360 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 ZSWIM4Q9H7M6 989 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 NCOA5Q9HCD5 579 aaKnown RBP10.69□□□□□ -0.7
PHGDH-212ENST00000641247 FBXL5Q9UKA1 691 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 INVSQ9Y283 1065 aa10.69□□□□□ -0.7
PHGDH-212ENST00000641247 TDRD15B5MCY1 1934 aaKnown RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 TICRRQ7Z2Z1 1910 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 NID2Q14112 1375 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 CCDC196A0A1B0GTZ2 297 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 BCLAF3A2AJT9 711 aaKnown RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.71e-16■■■■■ 39.7
PHGDH-212ENST00000641247 IFNAR1P17181 557 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 PTMSP20962 102 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 CSRP1P21291 193 aaKnown RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 PSMA5P28066 241 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 CCT2P78371 535 aaKnown RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 CREB5Q02930 508 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 KRT32Q14532 448 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 EARS2Q5JPH6 523 aaKnown RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 NAIF1Q69YI7 327 aaPredicted RBP10.68□□□□□ -0.7
PHGDH-212ENST00000641247 NCAPH2Q6IBW4 605 aa10.68□□□□□ -0.7
PHGDH-212ENST00000641247 RNF19BQ6ZMZ0 732 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms