RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 KCTD2Q14681 263 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PLCB4Q15147 1175 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 TUBB8Q3ZCM7 444 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 SPDYCQ5MJ68 293 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 WDR49Q8IV35 697 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PKNOX2Q96KN3 472 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 MMP19Q99542 508 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 PLVAPQ9BX97 442 aa18.21■□□□□ 0.51
PHGDH-211ENST00000641213 ABLIM1O14639 778 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 PDCLQ13371 301 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 TTLL12Q14166 644 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-211ENST00000641213 LIN9Q5TKA1 542 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 ZBTB8OSQ8IWT0 167 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 FBXO16Q8IX29 292 aaPredicted RBP18.2■□□□□ 0.5
PHGDH-211ENST00000641213 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 UBR7Q8N806 425 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 FBXO25Q8TCJ0 367 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 SPATA33Q96N06 139 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 RUNDC3BQ96NL0 473 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 C11orf70Q9BRQ4 267 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 CENPHQ9H3R5 247 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 ZSWIM8A7E2V4 1837 aa18.2■□□□□ 0.5
PHGDH-211ENST00000641213 OGTO15294 1046 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 THAP12O43422 761 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 ASS1P00966 412 aaKnown RBP18.19■□□□□ 0.5
PHGDH-211ENST00000641213 NF2P35240 595 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 FNTAP49354 379 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 MAPK6Q16659 721 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 RUFY4Q6ZNE9 571 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 PHF13Q86YI8 300 aaPredicted RBP18.19■□□□□ 0.5
PHGDH-211ENST00000641213 DHX37Q8IY37 1157 aaKnown RBP18.19■□□□□ 0.5
PHGDH-211ENST00000641213 EXOC8Q8IYI6 725 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 VCPIP1Q96JH7 1222 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 IMPG2Q9BZV3 1241 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 LRRC19Q9H756 370 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 ADAM22Q9P0K1 906 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 PROSCO94903 275 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 POTEJP0CG39 1038 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 KCNJ1P48048 391 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 ZNF132P52740 706 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 MCL1Q07820 350 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 LLGL1Q15334 1064 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 TRAPPC12Q8WVT3 735 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 COPS5Q92905 334 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 OPTNQ96CV9 577 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 MTMR12Q9C0I1 747 aa18.19■□□□□ 0.5
PHGDH-211ENST00000641213 CPSF3Q9UKF6 684 aaKnown RBP18.19■□□□□ 0.5
PHGDH-211ENST00000641213 OSBPP22059 807 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 GBP1P32455 592 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 PTP4A2Q12974 167 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 MAMLD1Q13495 774 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 TMEM63BQ5T3F8 832 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 RHPN2Q8IUC4 686 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 ZNF606Q8WXB4 792 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 FAM212AQ96EL1 285 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 DDX27Q96GQ7 796 aaKnown RBP18.18■□□□□ 0.5
PHGDH-211ENST00000641213 C2orf40Q9H1Z8 148 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 EPB41L4BQ9H329 900 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 RSPH14Q9UHP6 348 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 MYL6P60660 151 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 DAB2IPQ5VWQ8 1189 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 PLEKHA7Q6IQ23 1121 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 GPAT2Q6NUI2 795 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 MMS22LQ6ZRQ5 1243 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 MRPL47Q9HD33 250 aaKnown RBP18.18■□□□□ 0.5
PHGDH-211ENST00000641213 PARP2Q9UGN5 583 aa18.18■□□□□ 0.5
PHGDH-211ENST00000641213 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.18■□□□□ 0.5
PHGDH-211ENST00000641213 PLXNB2O15031 1838 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 PASKQ96RG2 1323 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 PROZP22891 400 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 PMS2P54278 862 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 GUCY1A3Q02108 690 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 C1QBPQ07021 282 aaKnown RBP18.17■□□□□ 0.5
PHGDH-211ENST00000641213 DUOXA2Q1HG44 320 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 SGO2Q562F6 1265 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 AGBL2Q5U5Z8 902 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 WDR78Q5VTH9 848 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 FASTKD5Q7L8L6 764 aaKnown RBP18.17■□□□□ 0.5
PHGDH-211ENST00000641213 C1orf54Q8WWF1 131 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 MROH8Q9H579 483 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 LRRC4CQ9HCJ2 640 aa18.17■□□□□ 0.5
PHGDH-211ENST00000641213 ECEL1O95672 775 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 GJB1P08034 283 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 TXNP10599 105 aaKnown RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 EIF3BP55884 814 aaKnown RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 SURF1Q15526 300 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 PPP1R2P3Q6NXS1 205 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 TSHZ1Q6ZSZ6 1077 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 BCAS4Q8TDM0 211 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 SLCO2A1Q92959 643 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 ZNF668Q96K58 619 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 JPH2Q9BR39 696 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 HERPUD2Q9BSE4 406 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 FHDC1Q9C0D6 1143 aaPredicted RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 PABPC3Q9H361 631 aaKnown RBP18.16■□□□□ 0.5
PHGDH-211ENST00000641213 SMARCAD1Q9H4L7 1026 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 PTPRHQ9HD43 1115 aa18.16■□□□□ 0.5
PHGDH-211ENST00000641213 PDGFCQ9NRA1 345 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms