RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 CYP4F22Q6NT55 531 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 CATSPER4Q7RTX7 472 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 C7orf31Q8N865 590 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 ZNF653Q96CK0 615 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 FAXDC2Q96IV6 333 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 MS4A14Q96JA4 679 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 UVRAGQ9P2Y5 699 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 PCNTO95613 3336 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 TARSL2A2RTX5 802 aaKnown RBP18.48■□□□□ 0.55
PHGDH-208ENST00000641023 C17orf102A2RUQ5 167 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 KIF3CO14782 793 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 ERLIN1O75477 346 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 MTA2O94776 668 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 TBC1D8O95759 1140 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 CYP1A2P05177 515 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 NFICP08651 508 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 C6orf222P0C671 652 aaPredicted RBP18.48■□□□□ 0.55
PHGDH-208ENST00000641023 YWHAEP62258 255 aaKnown RBP18.48■□□□□ 0.55
PHGDH-208ENST00000641023 NOGQ13253 232 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 SLC10A6Q3KNW5 377 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 PPP1R2P3Q6NXS1 205 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 NT5DC4Q86YG4 428 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 CD302Q8IX05 232 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 DNAJB3Q8WWF6 145 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 TRIM11Q96F44 468 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 PNKPQ96T60 521 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 XYLT2Q9H1B5 865 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 ARFGAP3Q9NP61 516 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 MROH7Q68CQ1 1323 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 CYP1A1P04798 512 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-208ENST00000641023 FGFR4P22455 802 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 EIF4BP23588 611 aaKnown RBP18.47■□□□□ 0.55
PHGDH-208ENST00000641023 NSFP46459 744 aaKnown RBP18.47■□□□□ 0.55
PHGDH-208ENST00000641023 PTPROQ16827 1216 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 C11orf63Q6NUN7 778 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 WDR93Q6P2C0 686 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 SLC27A1Q6PCB7 646 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 RUFY4Q6ZNE9 571 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 UBR7Q8N806 425 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 C1orf127Q8N9H9 656 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 PPP1R13LQ8WUF5 828 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 OSMRQ99650 979 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 CCDC94Q9BW85 323 aaPredicted RBP18.47■□□□□ 0.55
PHGDH-208ENST00000641023 ARHGAP39Q9C0H5 1083 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 CISHQ9NSE2 258 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 EHD2Q9NZN4 543 aa18.47■□□□□ 0.55
PHGDH-208ENST00000641023 TREHO43280 583 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 THAP12O43422 761 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CALCAP01258 141 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 MYBL1P10243 752 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 DARSP14868 501 aaKnown RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 HOXA11P31270 313 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 GRM5P41594 1212 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 FLT3LGP49771 235 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 ZNF132P52740 706 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CENPCQ03188 943 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 ZNF667Q5HYK9 610 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 NOTUMQ6P988 496 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 ZNF564Q8TBZ8 553 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 HNRNPLLQ8WVV9 542 aaKnown RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 NUP85Q9BW27 656 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 SPC25Q9HBM1 224 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 SMARCAL1Q9NZC9 954 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CNOT8Q9UFF9 292 aaKnown RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 C2CD2Q9Y426 696 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 ALG6Q9Y672 507 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CYBAP13498 195 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CD58P19256 250 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 ATICP31939 592 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 TMEM132DQ14C87 1099 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 GNASQ5JWF2 1037 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CC2D1AQ6P1N0 951 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 NME8Q8N427 588 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 ACTRT1Q8TDG2 376 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 TRIB2Q92519 343 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CYFIP2Q96F07 1278 aa18.46■□□□□ 0.55
PHGDH-208ENST00000641023 RNF216Q9NWF9 866 aaPredicted RBP18.46■□□□□ 0.55
PHGDH-208ENST00000641023 CEP104O60308 925 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 ITGB3P05106 788 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 AXLP30530 894 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 ASPAP45381 313 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 GJA9P57773 515 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 HIC1Q14526 733 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 WDR72Q3MJ13 1102 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 MCOLN2Q8IZK6 566 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 TRPV1Q8NER1 839 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 ZNF606Q8WXB4 792 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 CPA5Q8WXQ8 436 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 RPS6KC1Q96S38 1066 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 PLEKHA5Q9HAU0 1116 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 CDHR5Q9HBB8 845 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 NXF1Q9UBU9 619 aaKnown RBP18.45■□□□□ 0.54
PHGDH-208ENST00000641023 SIX4Q9UIU6 781 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 GABRQQ9UN88 632 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 MIF4GDA9UHW6 222 aaKnown RBP18.45■□□□□ 0.54
PHGDH-208ENST00000641023 MEFVO15553 781 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-208ENST00000641023 ATMINO43313 823 aaPredicted RBP18.45■□□□□ 0.54
PHGDH-208ENST00000641023 WEE2P0C1S8 567 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 NAA35Q5VZE5 725 aa18.45■□□□□ 0.54
PHGDH-208ENST00000641023 USP38Q8NB14 1042 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms