RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 CDY1Q9Y6F8 540 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 PTPRBP23467 1997 aa9.02□□□□□ -0.97
SCARB2-226ENST00000640916 ZMYM2Q9UBW7 1377 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 SPAARA0A1B0GVQ0 90 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CHADO15335 359 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 MEFVO15553 781 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 GAS7O60861 476 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 C1QL1O75973 258 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 SEC24AO95486 1093 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 ARF4P18085 180 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 AXLP30530 894 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 EPHA5P54756 1037 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 PTENP60484 403 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 IRX4P78413 519 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 FGD1P98174 961 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CREB5Q02930 508 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 FCHO2Q0JRZ9 810 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 NOTUMQ6P988 496 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 C1orf228Q6PIY5 440 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CASC1Q6TDU7 716 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 PIP4P1Q86T03 277 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 FERMT3Q86UX7 667 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 SGMS1Q86VZ5 419 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CDR2LQ86X02 465 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 RALGPS2Q86X27 583 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 SYNPOQ8N3V7 929 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 RNF149Q8NC42 400 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 GLIS3Q8NEA6 775 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 RDM1Q8NG50 284 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 TTC8Q8TAM2 541 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 ZSCAN18Q8TBC5 510 aaPredicted RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CHFRQ96EP1 664 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CCDC51Q96ER9 411 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 TMEM87BQ96K49 555 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 REPIN1Q9BWE0 567 aaKnown RBP9.01□□□□□ -0.97
SCARB2-226ENST00000640916 LRRC2Q9BYS8 371 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 ZMYND12Q9H0C1 365 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 GLT8D2Q9H1C3 349 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 TMEM9BQ9NQ34 198 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 PLSCR2Q9NRY7 297 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 GTSE1Q9NYZ3 720 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 CEP72Q9P209 647 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 BACE2Q9Y5Z0 518 aa9.01□□□□□ -0.97
SCARB2-226ENST00000640916 ESYT2A0FGR8 921 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 EML1O00423 815 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 ZNF197O14709 1029 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 B4GALT5O43286 388 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 KALRNO60229 2985 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 PRB1P04280 392 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 TKTP29401 623 aaKnown RBP9□□□□□ -0.97
SCARB2-226ENST00000640916 KPNA1P52294 538 aaPredicted RBP9□□□□□ -0.97
SCARB2-226ENST00000640916 FAM193AP78312 1265 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 ROR1Q01973 937 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 MBTD1Q05BQ5 628 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 SCAPQ12770 1279 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 TEAD2Q15562 447 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 LRCH2Q5VUJ6 765 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 PDXDC1Q6P996 788 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 PDZRN4Q6ZMN7 1036 aaPredicted RBP9□□□□□ -0.97
SCARB2-226ENST00000640916 MIER3Q7Z3K6 550 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 MICU3Q86XE3 530 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 SMC5Q8IY18 1101 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 CHCHD4Q8N4Q1 142 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 ZNF461Q8TAF7 563 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 CSGALNACT1Q8TDX6 532 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 PSPC1Q8WXF1 523 aaKnown RBP9□□□□□ -0.97
SCARB2-226ENST00000640916 ZFYVE19Q96K21 471 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 TEKT3Q9BXF9 490 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 LRRC3Q9BY71 257 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 SLC12A7Q9Y666 1083 aa9□□□□□ -0.97
SCARB2-226ENST00000640916 A0A1B0GUA9 196 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 ERLIN2O94905 339 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 NPTXRO95502 500 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 LRG1P02750 347 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 ATF2P15336 505 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 MCM5P33992 734 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 TNK2Q07912 1038 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 ELAVL2Q12926 359 aaKnown RBP8.99□□□□□ -0.97
SCARB2-226ENST00000640916 MMRN1Q13201 1228 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 PFKFB3Q16875 520 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-226ENST00000640916 SLC8B1Q6J4K2 584 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 FSTL4Q6MZW2 842 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 RAB44Q7Z6P3 723 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-226ENST00000640916 TCEAL8Q8IYN2 117 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 C3orf58Q8NDZ4 430 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 SHKBP1Q8TBC3 707 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 HNRNPLLQ8WVV9 542 aaKnown RBP8.99□□□□□ -0.97
SCARB2-226ENST00000640916 CCDC136Q96JN2 1154 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 JPH2Q9BR39 696 aaPredicted RBP8.99□□□□□ -0.97
SCARB2-226ENST00000640916 MKNK1Q9BUB5 465 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 XPNPEP1Q9NQW7 623 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 PARP2Q9UGN5 583 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 BRPF3Q9ULD4 1205 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 INSL5Q9Y5Q6 135 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 APC2O95996 2303 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 ACACAQ13085 2346 aa8.99□□□□□ -0.97
SCARB2-226ENST00000640916 CCDC194A0A1B0GVG4 234 aa8.98□□□□□ -0.97
SCARB2-226ENST00000640916 TMEM189-UBE2V1I3L0A0 370 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms