RNA–Protein interactions for RNA: ENST00000640615.1

HLA-B-258, Transcript of major histocompatibility complex, class I, B, humanhuman

BASIC

Gene HLA-B, Length 240 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-258ENST00000640615 APEX2Q9UBZ4 518 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 SIX4Q9UIU6 781 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 DNAJC12Q9UKB3 198 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 ITGA11Q9UKX5 1188 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 CAPN11Q9UMQ6 739 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 PLAGL2Q9UPG8 496 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 LUC7L2Q9Y383 392 aaKnown RBP9.44□□□□□ -0.9
HLA-B-258ENST00000640615 FHOD1Q9Y613 1164 aa9.44□□□□□ -0.9
HLA-B-258ENST00000640615 A0A1W2PQJ5 194 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 RNF225M0QZC1 329 aaPredicted RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 HOXA2O43364 376 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 EFCAB14O75071 495 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 FGBP02675 491 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 AMHP03971 560 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ATICP31939 592 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 KRT9P35527 623 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ADKP55263 362 aaKnown RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ZBED6P86452 979 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 SOX4Q06945 474 aaPredicted RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 GRIK3Q13003 919 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 RAPGEF1Q13905 1077 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ARID5BQ14865 1188 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ARHGAP44Q17R89 818 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF699Q32M78 642 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 NOMO2Q5JPE7 1267 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 OTOP2Q7RTS6 562 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 NPAS4Q8IUM7 802 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 CNGA4Q8IV77 575 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 ARHGEF19Q8IW93 802 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 PPM1KQ8N3J5 372 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 LRCH3Q96II8 777 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 HPDLQ96IR7 371 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 LBHD1Q9BQE6 289 aaPredicted RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 EDEM3Q9BZQ6 932 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 TTYH3Q9C0H2 523 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 GOLGA2P5Q9HBQ8 144 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 APOBEC3GQ9HC16 384 aaKnown RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 KANSL3Q9P2N6 904 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 NUB1Q9Y5A7 615 aa9.43□□□□□ -0.9
HLA-B-258ENST00000640615 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 LAMA2P24043 3122 aaKnown RBP9.43□□□□□ -0.9
HLA-B-258ENST00000640615 CASTOR2A6NHX0 329 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 ZBBXA8MT70 800 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 PIRO00625 290 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 INPPL1O15357 1258 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 MFAP3LO75121 409 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 BAIAP3O94812 1187 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 ASS1P00966 412 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 RFX1P22670 979 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 KCNJ6P48051 423 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 GATMP50440 423 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 MFAP3P55082 362 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 WDR5P61964 334 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 NOP14P78316 857 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 RNASELQ05823 741 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 TUSC3Q13454 348 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF667Q5HYK9 610 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 C9orf57Q5W0N0 161 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 ZNF365Q70YC5 407 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 C16orf59Q7L2K0 433 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 TC2NQ8N9U0 490 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 OR8K1Q8NGG5 319 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 CXorf38Q8TB03 319 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 BAP1Q92560 729 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 RABGGTAQ92696 567 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 TAF4BQ92750 862 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 KAT5Q92993 513 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 CASD1Q96PB1 797 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 FAM193BQ96PV7 902 aaPredicted RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 SPAG5Q96R06 1193 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 NAA15Q9BXJ9 866 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 STK33Q9BYT3 514 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 XYLT2Q9H1B5 865 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 CACNG4Q9UBN1 327 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 NXF1Q9UBU9 619 aaKnown RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 FBXL5Q9UKA1 691 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 AJAP1Q9UKB5 411 aaPredicted RBP9.42□□□□□ -0.9
HLA-B-258ENST00000640615 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 DAAM1Q9Y4D1 1078 aa9.42□□□□□ -0.9
HLA-B-258ENST00000640615 TANC1Q9C0D5 1861 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 ANO9A1A5B4 782 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 LRRC53A6NM62 1247 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 TBKBP1A7MCY6 615 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 PODXLO00592 558 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 PPEF2O14830 753 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 P4HA1P13674 534 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 TBXAS1P24557 533 aaPredicted RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 LRPAP1P30533 357 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 RPL9P32969 192 aaKnown RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 PNPLA4P41247 253 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 STAT1P42224 750 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 MAGEA10P43363 369 aaPredicted RBP9.41□□□□□ -0.9
HLA-B-258ENST00000640615 CLCNKBP51801 687 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 EPHB4P54760 987 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 TNNC1P63316 161 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 DEFB103AP81534 67 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 GCNT1Q02742 428 aa9.41□□□□□ -0.9
HLA-B-258ENST00000640615 CUL2Q13617 745 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms