RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 PPM1AP35813 382 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 PIK3CAP42336 1068 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 FMO5P49326 533 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 MYL7Q01449 175 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 KRT31Q15323 416 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 DCLRE1AQ6PJP8 1040 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 TMEM130Q8N3G9 435 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 TIFAQ96CG3 184 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 TGS1Q96RS0 853 aaKnown RBP23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 HSD3B7Q9H2F3 369 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 NUB1Q9Y5A7 615 aa23.26■■□□□ 1.31
TSPAN9-208ENST00000640568 TADA2AO75478 443 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 PNPLA4P41247 253 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 VWA3BQ502W6 1294 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 CCDC150Q8NCX0 1101 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 HASPINQ8TF76 798 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 TMEM169Q96HH4 297 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 IMPG2Q9BZV3 1241 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 LIMA1Q9UHB6 759 aaKnown RBP23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 MTUS1Q9ULD2 1270 aa23.25■■□□□ 1.31
TSPAN9-208ENST00000640568 ATP1A3P13637 1013 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 TAF6P49848 677 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 TAP1Q03518 808 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 MYO1EQ12965 1108 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 NCOA4Q13772 614 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 CBWD6Q4V339 395 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 CBWD3Q5JTY5 395 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 CBWD5Q5RIA9 395 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 C17orf80Q9BSJ5 609 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 VPS16Q9H269 839 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 SPG21Q9NZD8 308 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 ANO9A1A5B4 782 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 TMEM189-UBE2V1I3L0A0 370 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 PIRO00625 290 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 KIF4AO95239 1232 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 SERPINC1P01008 464 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 BMPR1AP36894 532 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 SV2CQ496J9 727 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 C15orf39Q6ZRI6 1047 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 SLC39A11Q8N1S5 342 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 LRRC52Q8N7C0 313 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 FBXL13Q8NEE6 735 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 PLVAPQ9BX97 442 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 NDST4Q9H3R1 872 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 SIX4Q9UIU6 781 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 ADAM28Q9UKQ2 775 aa23.24■■□□□ 1.31
TSPAN9-208ENST00000640568 PLXNA4Q9HCM2 1894 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 LAMA3Q16787 3333 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 PPEF2O14830 753 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 P4HA2O15460 535 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 ARHGEF15O94989 841 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 CST3P01034 146 aaPredicted RBP23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 HLA-DRAP01903 254 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 LINC00271P0C7V0 271 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 COPB1P53618 953 aaKnown RBP23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 FILIP1LQ4L180 1135 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 TAS1R2Q8TE23 839 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 IGSF21Q96ID5 467 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 MARCH5Q9NX47 278 aa23.23■■□□□ 1.31
TSPAN9-208ENST00000640568 TRAPPC3O43617 180 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 RB1P06400 928 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 PAX3P23760 479 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 ATICP31939 592 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 ERVK-21P61565 698 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 KRT17Q04695 432 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 ZNF699Q32M78 642 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 EPC2Q52LR7 807 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 DSTYKQ6XUX3 929 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 GAS2L3Q86XJ1 694 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 C3orf58Q8NDZ4 430 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 HPDLQ96IR7 371 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 RAB20Q9NX57 234 aa23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 SF3B1O75533 1304 aaKnown RBP eCLIP23.22■■□□□ 1.31
TSPAN9-208ENST00000640568 F8W810 466 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 FGF18O76093 207 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 VNN1O95497 513 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 MYL6P60660 151 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 ELAVL2Q12926 359 aaKnown RBP23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 SGSM1Q2NKQ1 1148 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 MIIPQ5JXC2 388 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 FKBP15Q5T1M5 1219 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 TMEM173Q86WV6 379 aaPredicted RBP23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 KLHL23Q8NBE8 558 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 FBXO22Q8NEZ5 403 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 C11orf84Q9BUA3 381 aaPredicted RBP23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 RBSNQ9H1K0 784 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 CERS4Q9HA82 394 aa23.21■■□□□ 1.31
TSPAN9-208ENST00000640568 C5orf67F2Z3F1 127 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 PMM2O15305 246 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 ITGB1P05556 798 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 LILRA4P59901 499 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 WDR44Q5JSH3 913 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 FUT10Q6P4F1 479 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 CXorf38Q8TB03 319 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 ARNTL2Q8WYA1 636 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 STK39Q9UEW8 545 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 PUF60Q9UHX1 559 aaKnown RBP23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 TRIOBPQ9H2D6 2365 aa23.2■■□□□ 1.3
TSPAN9-208ENST00000640568 KPNA7A9QM74 516 aa23.19■■□□□ 1.3
TSPAN9-208ENST00000640568 BRCC3P46736 316 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms