RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 ZBTB46Q86UZ6 589 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 ZFPM1Q8IX07 1006 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 HAS1Q92839 578 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 CLIP3Q96DZ5 547 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 DDX56Q9NY93 547 aaKnown RBP4.19□□□□□ -1.74
ATM-230ENST00000640388 GPRC5BQ9NZH0 403 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 SLC23A1Q9UHI7 598 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 SERPINB13Q9UIV8 391 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 USP15Q9Y4E8 981 aaPredicted RBP4.19□□□□□ -1.74
ATM-230ENST00000640388 IPPQ9Y573 584 aa4.19□□□□□ -1.74
ATM-230ENST00000640388 HECW1Q76N89 1606 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 ERICH3Q5RHP9 1530 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 OVOL3O00110 214 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 MAKP20794 623 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 NR4A1P22736 598 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 PTGS2P35354 604 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 RECQLP46063 649 aaPredicted RBP4.18□□□□□ -1.74
ATM-230ENST00000640388 ADKP55263 362 aaKnown RBP4.18□□□□□ -1.74
ATM-230ENST00000640388 FAM189BP81408 668 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 ATP8B2P98198 1209 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 CREMQ03060 361 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 ABHD18Q0P651 414 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 PDCD4Q53EL6 469 aaKnown RBP4.18□□□□□ -1.74
ATM-230ENST00000640388 FAM102AQ5T9C2 384 aaPredicted RBP4.18□□□□□ -1.74
ATM-230ENST00000640388 DRC7Q8IY82 874 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 SYNE4Q8N205 404 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 MIER2Q8N344 545 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 STAG1Q8WVM7 1258 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 KAT5Q92993 513 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 CHMP4CQ96CF2 233 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 TMX3Q96JJ7 454 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 TEX101Q9BY14 249 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 PCED1AQ9H1Q7 454 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 SLITRK6Q9H5Y7 841 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 LUC7L2Q9Y383 392 aaKnown RBP4.18□□□□□ -1.74
ATM-230ENST00000640388 CHST2Q9Y4C5 530 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 C9orf84Q5VXU9 1444 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 SPATA31A6Q5VVP1 1343 aa4.18□□□□□ -1.74
ATM-230ENST00000640388 DENND4BO75064 1496 aaPredicted RBP4.18□□□□□ -1.74
ATM-230ENST00000640388 TCRBV7S2A1N4TA0A589 114 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 DIRC3C9JPN6 131 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 RNASET2O00584 256 aaKnown RBP4.17□□□□□ -1.74
ATM-230ENST00000640388 KIAA0391O15091 583 aaKnown RBP4.17□□□□□ -1.74
ATM-230ENST00000640388 TNRC18O15417 2968 aaPredicted RBP4.17□□□□□ -1.74
ATM-230ENST00000640388 NCR1O76036 304 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 ZRANB2O95218 330 aaKnown RBP eCLIP4.17□□□□□ -1.74
ATM-230ENST00000640388 ITGB1P05556 798 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 ADH4P08319 380 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 PDGFRBP09619 1106 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 ZSCAN20P17040 1043 aaPredicted RBP4.17□□□□□ -1.74
ATM-230ENST00000640388 SLC6A2P23975 617 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 NEK2P51955 445 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 CTXN1P60606 82 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 CDC42EP1Q00587 391 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 KLF10Q13118 480 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 TARDBPQ13148 414 aaKnown RBP eCLIP4.17□□□□□ -1.74
ATM-230ENST00000640388 TIGD2Q4W5G0 525 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 TSHZ3Q63HK5 1081 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 METRNLQ641Q3 311 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 SEM1Q6ZVN7 128 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 MRGPREQ86SM8 312 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 DNAJC5GQ8N7S2 189 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 NEU4Q8WWR8 484 aaPredicted RBP4.17□□□□□ -1.74
ATM-230ENST00000640388 CEP89Q96ST8 783 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 NEU1Q99519 415 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 MRIQ9BWK5 157 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 SLC46A2Q9BY10 475 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 AKIP1Q9NQ31 210 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 AASDHPPTQ9NRN7 309 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 FBXO34Q9NWN3 711 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 FZD1Q9UP38 647 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 ATP11BQ9Y2G3 1177 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 PCDHB1Q9Y5F3 818 aa4.17□□□□□ -1.74
ATM-230ENST00000640388 DNMT1P26358 1616 aaKnown RBP4.17□□□□□ -1.74
ATM-230ENST00000640388 NPATQ14207 1427 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 FGD6Q6ZV73 1430 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 ALDH1L1O75891 902 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 NDUFA10O95299 355 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 IL33O95760 270 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 SPATA31D3P0C874 917 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 LAG3P18627 525 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 ZFP36P26651 326 aaKnown RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 ZNF280AP59817 542 aaPredicted RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 ATP2B3Q16720 1220 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 AGAP9Q5VTM2 703 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 PPP4R3AQ6IN85 833 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 SPATA31D4Q6ZUB0 917 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 PLXDC1Q8IUK5 500 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 RHOT2Q8IXI1 618 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 CMTR2Q8IYT2 770 aaKnown RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 CPA6Q8N4T0 437 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 LARP4BQ92615 738 aaKnown RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 CLPTM1LQ96KA5 538 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 REXO4Q9GZR2 422 aaKnown RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 C11orf54Q9H0W9 315 aaPredicted RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 GSTO2Q9H4Y5 243 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 TYW1Q9NV66 732 aaKnown RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 FAM30AQ9NZY2 134 aa4.16□□□□□ -1.74
ATM-230ENST00000640388 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.16□□□□□ -1.74
ATM-230ENST00000640388 ING1Q9UK53 422 aaPredicted RBP4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms