RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 VARS2Q5ST30 1063 aaKnown RBP19.23■□□□□ 0.67
PTPN11-207ENST00000639857 FOXD4L3Q6VB84 417 aaPredicted RBP19.23■□□□□ 0.67
PTPN11-207ENST00000639857 NT5DC4Q86YG4 428 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 BEST2Q8NFU1 509 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 OXCT2Q9BYC2 517 aaPredicted RBP19.23■□□□□ 0.67
PTPN11-207ENST00000639857 PCDHB8Q9UN66 801 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 CDY1Q9Y6F8 540 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 CLUHO75153 1309 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 TRIOO75962 3097 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 I3L4J1 428 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 M0QZQ0 153 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 KIAA0391O15091 583 aaKnown RBP19.22■□□□□ 0.67
PTPN11-207ENST00000639857 EIF3DO15371 548 aaKnown RBP eCLIP19.22■□□□□ 0.67
PTPN11-207ENST00000639857 TBC1D4O60343 1298 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 IL18RAPO95256 599 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 LDHAP00338 332 aaKnown RBP19.22■□□□□ 0.67
PTPN11-207ENST00000639857 SPATA31D3P0C874 917 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 ADSSP30520 456 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 CASP5P51878 434 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 KRT85P78386 507 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 TMEM132DQ14C87 1099 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 SPATA31D4Q6ZUB0 917 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 C7orf25Q9BPX7 421 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 PIDD1Q9HB75 910 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 TBC1D7Q9P0N9 293 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 MAFFQ9ULX9 164 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 SORCS3Q9UPU3 1222 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 SCN1AP35498 2009 aa19.22■□□□□ 0.67
PTPN11-207ENST00000639857 ARHGEF37A1IGU5 675 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 FAM86C2PA6NEL3 165 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 TISP43B9A030 160 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 POLR2DO15514 142 aaKnown RBP19.21■□□□□ 0.67
PTPN11-207ENST00000639857 ADAM12O43184 909 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 C8AP07357 584 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 MYBP10242 640 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 COL9A1P20849 921 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 SP100P23497 879 aaPredicted RBP19.21■□□□□ 0.67
PTPN11-207ENST00000639857 ACOT2P49753 483 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 ASIC1P78348 528 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 SPAG1Q07617 926 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 KCNA1Q09470 495 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 MTMR3Q13615 1198 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 BECN1Q14457 450 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 PPM1LQ5SGD2 360 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 JADE1Q6IE81 842 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 ZNF280DQ6N043 979 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 UBALD2Q8IYN6 164 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 SYCP3Q8IZU3 236 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 ZNF461Q8TAF7 563 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 ARIH1Q9Y4X5 557 aaPredicted RBP19.21■□□□□ 0.67
PTPN11-207ENST00000639857 UBE4BO95155 1302 aa19.21■□□□□ 0.67
PTPN11-207ENST00000639857 DOCK6Q96HP0 2047 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 XYLBO75191 536 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 NFICP08651 508 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 ROR1Q01973 937 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 SIGLEC14Q08ET2 396 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 TPGS2Q68CL5 300 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 CRELD2Q6UXH1 353 aaPredicted RBP19.2■□□□□ 0.66
PTPN11-207ENST00000639857 RSPO2Q6UXX9 243 aaPredicted RBP19.2■□□□□ 0.66
PTPN11-207ENST00000639857 TRIM67Q6ZTA4 783 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 BMP8AQ7Z5Y6 402 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 FEZF2Q8TBJ5 459 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 FAM212AQ96EL1 285 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.2■□□□□ 0.66
PTPN11-207ENST00000639857 USP25Q9UHP3 1055 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 KCNH3Q9ULD8 1083 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 ZDHHC9Q9Y397 364 aa19.2■□□□□ 0.66
PTPN11-207ENST00000639857 ZFP37Q9Y6Q3 630 aaPredicted RBP19.2■□□□□ 0.66
PTPN11-207ENST00000639857 PVALEFA0A1B0GWK0 134 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 ANO9A1A5B4 782 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 ABLIM3O94929 683 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 OAZ2O95190 189 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 TYMPP19971 482 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 YWHAHQ04917 246 aaPredicted RBP19.19■□□□□ 0.66
PTPN11-207ENST00000639857 EHHADHQ08426 723 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 FAM26FQ5R3K3 315 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 UNC13DQ70J99 1090 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 BRSK2Q8IWQ3 736 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 SLC7A14Q8TBB6 771 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 LEO1Q8WVC0 666 aaPredicted RBP19.19■□□□□ 0.66
PTPN11-207ENST00000639857 SPATA32Q96LK8 384 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 FGFBP2Q9BYJ0 223 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 SCAND2PQ9GZW5 306 aaPredicted RBP19.19■□□□□ 0.66
PTPN11-207ENST00000639857 EPS15L1Q9UBC2 864 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 FBXL5Q9UKA1 691 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 HCN4Q9Y3Q4 1203 aa19.19■□□□□ 0.66
PTPN11-207ENST00000639857 PIRO00625 290 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 SLFN14P0C7P3 912 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 ATF2P15336 505 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 CMA1P23946 247 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 LILRA4P59901 499 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 SNRPFP62306 86 aaKnown RBP19.18■□□□□ 0.66
PTPN11-207ENST00000639857 CTXN3Q4LDR2 81 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 C9orf57Q5W0N0 161 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 EPM2AIP1Q7L775 607 aaPredicted RBP19.18■□□□□ 0.66
PTPN11-207ENST00000639857 CEP57L1Q8IYX8 460 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 NXPE3Q969Y0 559 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 IGSF9Q9P2J2 1179 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 NOTCH4Q99466 2003 aa19.18■□□□□ 0.66
PTPN11-207ENST00000639857 ZNF318Q5VUA4 2279 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms