RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 TNRQ92752 1358 aa13.73□□□□□ -0.21
UBE3A-228ENST00000638155 K7ERI5 159 aa13.73□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF23P17027 643 aa13.73□□□□□ -0.21
UBE3A-228ENST00000638155 ZAP70P43403 619 aa13.73□□□□□ -0.21
UBE3A-228ENST00000638155 ARHGDIBP52566 201 aa13.73□□□□□ -0.21
UBE3A-228ENST00000638155 ADI1Q9BV57 179 aa13.73□□□□□ -0.21
UBE3A-228ENST00000638155 PSMC3IPQ9P2W1 217 aaPredicted RBP13.73□□□□□ -0.21
UBE3A-228ENST00000638155 SLC39A14Q15043 492 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 P3H1Q32P28 736 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 EPHX4Q8IUS5 362 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 HDAC6Q9UBN7 1215 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SRPRBQ9Y5M8 271 aaKnown RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 FAM47DPA6NHR8 397 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 GNAT1P11488 350 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 ADAMTS1Q9UHI8 967 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SNAPC4Q5SXM2 1469 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 FAM187AA6NFU0 413 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 USP17L12C9JPN9 530 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 USP17L21D6R901 530 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 NDUFS3O75489 264 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 PLCG1P19174 1290 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 STAT5AP42229 794 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 STARP49675 285 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 STAT5BP51692 787 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 COPAP53621 1224 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SLC9A7Q96T83 725 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 ABHD10Q9NUJ1 306 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 COMMD9Q9P000 198 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 DDR2Q16832 855 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 IZUMO3Q5VZ72 239 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SHCBP1Q8NEM2 672 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SMCO3A2RU48 225 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 EXTL3O43909 919 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 BCL10O95999 233 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 HSD17B4P51659 736 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 LCORLQ8N3X6 602 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SLFN13Q68D06 897 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 OLFML1Q6UWY5 402 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 DDX53Q86TM3 631 aaKnown RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 CENPLQ8N0S6 344 aaPredicted RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SLC25A13Q9UJS0 675 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 PCF11O94913 1555 aaKnown RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 A8MXQ7 604 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 H2AFYO75367 372 aaKnown RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 LCA5LO95447 670 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 AGTP01019 485 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 C11orf96Q7Z7L8 435 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 PPP1R16BQ96T49 567 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 TOPORSQ9NS56 1045 aaPredicted RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 SPASTQ9UBP0 616 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 COQ6Q9Y2Z9 468 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.72□□□□□ -0.21
UBE3A-228ENST00000638155 NDUFB9Q9Y6M9 179 aa13.72□□□□□ -0.21
UBE3A-228ENST00000638155 IQGAP2Q13576 1575 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 MEI4A8MW99 385 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 PLA2G4BP0C869 781 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 USP14P54578 494 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 OTUD4Q01804 1114 aaKnown RBP13.71□□□□□ -0.21
UBE3A-228ENST00000638155 MTFR1Q15390 333 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 ZNF284Q2VY69 593 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 MFSD4BQ5TF39 518 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 CACHD1Q5VU97 1274 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 KLHL1Q9NR64 748 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 NUMA1Q14980 2115 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 TRPC5OSA6NMA1 111 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 ITGA3P26006 1051 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 SERPINB8P50452 374 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 SIX5Q8N196 739 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 RASSF5Q8WWW0 418 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 MIEF2Q96C03 454 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 OSBPL8Q9BZF1 889 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 KLHL4Q9C0H6 718 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 RGS18Q9NS28 235 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 RGS2P41220 211 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 RGS4P49798 205 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 KBTBD12Q3ZCT8 623 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 SEC16BQ96JE7 1060 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 DYNC1LI2O43237 492 aaPredicted RBP13.71□□□□□ -0.21
UBE3A-228ENST00000638155 YWHAQP27348 245 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 IDI1Q13907 227 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 GCKRQ14397 625 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 ARMC6Q6NXE6 501 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBE3A-228ENST00000638155 PCDHGA4Q9Y5G9 962 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 KCNN4O15554 427 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 CHN1P15882 459 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 CACNB1Q02641 598 aaPredicted RBP13.71□□□□□ -0.21
UBE3A-228ENST00000638155 EIF2S3LQ2VIR3 472 aaKnown RBP13.71□□□□□ -0.21
UBE3A-228ENST00000638155 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.21
UBE3A-228ENST00000638155 TASP1Q9H6P5 420 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 PARVAQ9NVD7 372 aa13.71□□□□□ -0.21
UBE3A-228ENST00000638155 UBN2Q6ZU65 1347 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 DENND3A2RUS2 1198 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 M0QYV0 167 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.22
UBE3A-228ENST00000638155 GFPT1Q06210 699 aaPredicted RBP13.71□□□□□ -0.22
UBE3A-228ENST00000638155 EPS8Q12929 822 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 CCNIQ14094 377 aa13.71□□□□□ -0.22
UBE3A-228ENST00000638155 MTERF2Q49AM1 385 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms