RNA–Protein interactions for RNA: ENST00000638140.1

EFHC1-239, Transcript of EF-hand domain containing 1, humanhuman

TSL 4

Gene EFHC1, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFHC1-239ENST00000638140 MAN1C1Q9NR34 630 aa13.21□□□□□ -0.29
EFHC1-239ENST00000638140 DZANK1Q9NVP4 752 aa13.21□□□□□ -0.29
EFHC1-239ENST00000638140 BDP1A6H8Y1 2624 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 EIF3DO15371 548 aaKnown RBP eCLIP13.2□□□□□ -0.3
EFHC1-239ENST00000638140 TGFB1I1O43294 461 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 MCM4P33991 863 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 WNT7BP56706 349 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 CREMQ03060 361 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 TMEM132DQ14C87 1099 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 KMT5BQ4FZB7 885 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 PDXDC1Q6P996 788 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 ANKS3Q6ZW76 656 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 BEST2Q8NFU1 509 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 SUSD3Q96L08 255 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 PLEKHA4Q9H4M7 779 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 DPP7Q9UHL4 492 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 DERAQ9Y315 318 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 CUL9Q8IWT3 2517 aa13.2□□□□□ -0.3
EFHC1-239ENST00000638140 GOLGA6L4A6NEF3 574 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 PPEF2O14830 753 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 CLIC2O15247 247 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 EXTL3O43909 919 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 RFPL2O75678 378 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 IL18RAPO95256 599 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 C1RP00736 705 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 PRR29P0C7W0 189 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
EFHC1-239ENST00000638140 STK4Q13043 487 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 RAB33AQ14088 237 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 MRPL58Q14197 206 aaKnown RBP13.19□□□□□ -0.3
EFHC1-239ENST00000638140 VARS2Q5ST30 1063 aaKnown RBP13.19□□□□□ -0.3
EFHC1-239ENST00000638140 C9orf57Q5W0N0 161 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 KRBA2Q6ZNG9 492 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 KREMEN2Q8NCW0 462 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 RIPOR3Q96MK2 946 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 POP1Q99575 1024 aaKnown RBP13.19□□□□□ -0.3
EFHC1-239ENST00000638140 POMKQ9H5K3 350 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 EPHX3Q9H6B9 360 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 SFXN1Q9H9B4 322 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 DPP3Q9NY33 737 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 RBAKQ9NYW8 714 aaPredicted RBP13.19□□□□□ -0.3
EFHC1-239ENST00000638140 MTRRQ9UBK8 725 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 C2CD2Q9Y426 696 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 TIMM13Q9Y5L4 95 aaPredicted RBP13.19□□□□□ -0.3
EFHC1-239ENST00000638140 BACE2Q9Y5Z0 518 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
EFHC1-239ENST00000638140 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 ZNF233A6NK53 670 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 LOC730098B7Z3J9 87 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 PIRO00625 290 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 SYN3O14994 580 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 TBC1D4O60343 1298 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 RPN1P04843 607 aaKnown RBP13.18□□□□□ -0.3
EFHC1-239ENST00000638140 MTHFRP42898 656 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 ARPP19P56211 112 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 LILRA4P59901 499 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 PSMD2Q13200 908 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 KNOP1Q1ED39 458 aaKnown RBP13.18□□□□□ -0.3
EFHC1-239ENST00000638140 SCARA3Q6AZY7 606 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 ELMSAN1Q6PJG2 1045 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 DSTYKQ6XUX3 929 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 EFCAB13Q8IY85 973 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 GPD1LQ8N335 351 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 HDAC7Q8WUI4 952 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 NECTIN4Q96NY8 510 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 PDE11AQ9HCR9 933 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 TSHZ2Q9NRE2 1034 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 AGPAT3Q9NRZ7 376 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 EXOC1Q9NV70 894 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 HSPBP1Q9NZL4 362 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 PCDHB8Q9UN66 801 aa13.18□□□□□ -0.3
EFHC1-239ENST00000638140 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.18□□□□□ -0.3
EFHC1-239ENST00000638140 TCHHQ07283 1943 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 CITO14578 2027 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 H7C4K7 107 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 M0QZQ0 153 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 KIAA0391O15091 583 aaKnown RBP13.17□□□□□ -0.3
EFHC1-239ENST00000638140 SPTLC1O15269 473 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 MYL1P05976 194 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 TFAMQ00059 246 aaKnown RBP13.17□□□□□ -0.3
EFHC1-239ENST00000638140 DPYDQ12882 1025 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 CTXN3Q4LDR2 81 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 SLC8B1Q6J4K2 584 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 C15orf39Q6ZRI6 1047 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 RNF135Q8IUD6 432 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 CBWD2Q8IUF1 395 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 BRSK2Q8IWQ3 736 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 FMR1NBQ8N0W7 255 aaPredicted RBP13.17□□□□□ -0.3
EFHC1-239ENST00000638140 KIAA0895Q8NCT3 520 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 APPL2Q8NEU8 664 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 ZNF461Q8TAF7 563 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 CACTINQ8WUQ7 758 aaKnown RBP13.17□□□□□ -0.3
EFHC1-239ENST00000638140 FBXL5Q9UKA1 691 aa13.17□□□□□ -0.3
EFHC1-239ENST00000638140 PI4K2BG5E9Z4 385 aa13.16□□□□□ -0.3
EFHC1-239ENST00000638140 ZMYND10O75800 440 aa13.16□□□□□ -0.3
EFHC1-239ENST00000638140 AARSP49588 968 aaKnown RBP eCLIP13.16□□□□□ -0.3
EFHC1-239ENST00000638140 CYP2J2P51589 502 aa13.16□□□□□ -0.3
EFHC1-239ENST00000638140 SNRPFP62306 86 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms