RNA–Protein interactions for RNA: ENST00000637988.1

SCN1A-217, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-217ENST00000637988 A0A087WZ62 844 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 SLC9A3R1O14745 358 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 FKTNO75072 461 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DGAT1O75907 488 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 MYL4P12829 197 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 UQCRBP14927 111 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CDH2P19022 906 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ATP1A2P50993 1020 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 GUCY2DQ02846 1103 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 LRRC41Q15345 812 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 TCP11X2Q5H9J9 407 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 TRIM68Q6AZZ1 485 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 XRRA1Q6P2D8 792 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CHSY1Q86X52 802 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ZNF655Q8N720 491 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 FBXO32Q969P5 355 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 EDC3Q96F86 508 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 REXO5Q96IC2 774 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 OMDQ99983 421 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CNOT10Q9H9A5 744 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CPDO75976 1380 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 A0A088AWK7 358 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 MTA2O94776 668 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ZNF10P21506 573 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CLNS1AP54105 237 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DR1Q01658 176 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 UGP2Q16851 508 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 LDHDQ86WU2 507 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CEP70Q8NHQ1 597 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 PPP1R16AQ96I34 528 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 SENP6Q9GZR1 1112 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 OSGEPL1Q9H4B0 414 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CBX8Q9HC52 389 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 TRPM5Q9NZQ8 1165 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 GGT7Q9UJ14 662 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 USP18Q9UMW8 372 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 A0A0D9SFI3 127 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 GARTP22102 1010 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 BRD2P25440 801 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 RANBP1P43487 201 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 THOP1P52888 689 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 MAP3K7CLP57077 242 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 COLEC12Q5KU26 742 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 FMO2Q99518 471 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ZCCHC2Q9C0B9 1178 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 GEMIN8Q9NWZ8 242 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 NDOR1Q9UHB4 597 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ZNF711Q9Y462 761 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 KRT33AO76009 404 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CLK3P49761 638 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 YWHAZP63104 245 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ZRANB3Q5FWF4 1079 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DIS3LQ8TF46 1054 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DEFB129Q9H1M3 183 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CAPN7Q9Y6W3 813 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 SFI1A8K8P3 1242 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 YWHAQP27348 245 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 HALP42357 657 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 GPC5P78333 572 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CUL4AQ13619 759 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 INAVAQ3KP66 663 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 APOA5Q6Q788 366 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CIPCQ9C0C6 399 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 TRIT1Q9H3H1 467 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DNAJC12Q9UKB3 198 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CHMP2BQ9UQN3 213 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 M0QYT0 321 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 MTSS1O43312 755 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 NR3C1P04150 777 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 RAB27AP51159 221 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 BYSLQ13895 437 aaKnown RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 CCDC85BQ15834 202 aaPredicted RBP6.43□□□□□ -1.38
SCN1A-217ENST00000637988 ME3Q16798 604 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 DDI1Q8WTU0 396 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 VPS11Q9H270 941 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 SYBUQ9NX95 663 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 TBK1Q9UHD2 729 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 AGAP1Q9UPQ3 857 aa6.43□□□□□ -1.38
SCN1A-217ENST00000637988 HS6ST1O60243 411 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 TMPRSS15P98073 1019 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 ADCK5Q3MIX3 580 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 MTHFD1LQ6UB35 978 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 CARNMT1Q8N4J0 409 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 IL17REQ8NFR9 667 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 COG1Q8WTW3 980 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 CAMKK2Q96RR4 588 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 NT5C1AQ9BXI3 368 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 EPC1Q9H2F5 836 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 CNOT8Q9UFF9 292 aaKnown RBP6.42□□□□□ -1.38
SCN1A-217ENST00000637988 TPX2Q9ULW0 747 aaKnown RBP6.42□□□□□ -1.38
SCN1A-217ENST00000637988 ADCY10Q96PN6 1610 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 A2ML1A8K2U0 1454 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 MDM2Q00987 491 aaPredicted RBP6.42□□□□□ -1.38
SCN1A-217ENST00000637988 TCEAL5Q5H9L2 206 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 ZCCHC8Q6NZY4 707 aaKnown RBP6.42□□□□□ -1.38
SCN1A-217ENST00000637988 JADE3Q92613 823 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 ADGRE3Q9BY15 652 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 SNX9Q9Y5X1 595 aa6.42□□□□□ -1.38
SCN1A-217ENST00000637988 MYPNQ86TC9 1320 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms