RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 KLHL23Q8NBE8 558 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 CXorf38Q8TB03 319 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 ARNTL2Q8WYA1 636 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 SLC35C1Q96A29 364 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 C11orf84Q9BUA3 381 aaPredicted RBP17.27■□□□□ 0.36
CLN6-216ENST00000636876 ZNF576Q9H609 170 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 CERS4Q9HA82 394 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 CBX8Q9HC52 389 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 FANCLQ9NW38 375 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
CLN6-216ENST00000636876 SIX4Q9UIU6 781 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 STXBP5LQ9Y2K9 1186 aa17.27■□□□□ 0.36
CLN6-216ENST00000636876 UNC80Q8N2C7 3258 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 PIRO00625 290 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 FGF18O76093 207 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 B3GAT3O94766 335 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 ITGB1P05556 798 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 IGFBP6P24592 240 aaPredicted RBP17.26■□□□□ 0.35
CLN6-216ENST00000636876 POLR2BP30876 1174 aaKnown RBP17.26■□□□□ 0.35
CLN6-216ENST00000636876 MTIF2P46199 727 aaKnown RBP17.26■□□□□ 0.35
CLN6-216ENST00000636876 GCLMP48507 274 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 RBP5P82980 135 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 PLCB3Q01970 1234 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 BIRC3Q13489 604 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 ZACNQ401N2 412 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 CD300LGQ6UXG3 332 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 C15orf39Q6ZRI6 1047 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 SV2AQ7L0J3 742 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 C3orf58Q8NDZ4 430 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 TMEM169Q96HH4 297 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 TMEM8AQ9HCN3 771 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 ADAM28Q9UKQ2 775 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 AGAP1Q9UPQ3 857 aa17.26■□□□□ 0.35
CLN6-216ENST00000636876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.26■□□□□ 0.35
CLN6-216ENST00000636876 SCN1AP35498 2009 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 BECN2A8MW95 431 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 KCNJ18B7U540 433 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 PHACTR2O75167 634 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 TADA2AO75478 443 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 EEF1GP26641 437 aaKnown RBP17.25■□□□□ 0.35
CLN6-216ENST00000636876 MXI1P50539 228 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 KRT17Q04695 432 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 KCNJ12Q14500 433 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 TCP11X2Q5H9J9 407 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 SCARA3Q6AZY7 606 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 CREBRFQ8IUR6 639 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 LRRC52Q8N7C0 313 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 FAM200AQ8TCP9 573 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 HASPINQ8TF76 798 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 HSD3B7Q9H2F3 369 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 TTYH1Q9H313 450 aaPredicted RBP17.25■□□□□ 0.35
CLN6-216ENST00000636876 MMRN2Q9H8L6 949 aa17.25■□□□□ 0.35
CLN6-216ENST00000636876 R3HCC1Q9Y3T6 440 aaKnown RBP17.25■□□□□ 0.35
CLN6-216ENST00000636876 SF3B1O75533 1304 aaKnown RBP eCLIP17.24■□□□□ 0.35
CLN6-216ENST00000636876 EPOPA6NHQ4 379 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 H3BNC9 293 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 VNN1O95497 513 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 EFEMP2O95967 443 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 KRT19P08727 400 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 ZNF18P17022 549 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 PAX3P23760 479 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 PNPLA4P41247 253 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 GPM6BQ13491 265 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 NCOA4Q13772 614 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 KRT39Q6A163 491 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 FUT10Q6P4F1 479 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 DDX53Q86TM3 631 aaKnown RBP17.24■□□□□ 0.35
CLN6-216ENST00000636876 SPPL3Q8TCT6 385 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 ZNF560Q96MR9 790 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 VN1R3Q9BXE9 311 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 LZTS1Q9Y250 596 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 NUB1Q9Y5A7 615 aa17.24■□□□□ 0.35
CLN6-216ENST00000636876 PLXNA4Q9HCM2 1894 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 CST3P01034 146 aaPredicted RBP17.23■□□□□ 0.35
CLN6-216ENST00000636876 HLA-DRAP01903 254 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 AFPP02771 609 aaKnown RBP17.23■□□□□ 0.35
CLN6-216ENST00000636876 FMO5P49326 533 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 AARSP49588 968 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLN6-216ENST00000636876 TAF6P49848 677 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 LILRA4P59901 499 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 UBE3AQ05086 875 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 KCNH2Q12809 1159 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 ELAVL2Q12926 359 aaKnown RBP17.23■□□□□ 0.35
CLN6-216ENST00000636876 TRPC3Q13507 836 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 MAN2A1Q16706 1144 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 SV2CQ496J9 727 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 CBWD6Q4V339 395 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 CBWD3Q5JTY5 395 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 CBWD5Q5RIA9 395 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 ZNF697Q5TEC3 545 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 LUZP1Q86V48 1076 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 RNF168Q8IYW5 571 aaPredicted RBP17.23■□□□□ 0.35
CLN6-216ENST00000636876 GDPD5Q8WTR4 605 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 GUCD1Q96NT3 240 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 TUBGCP2Q9BSJ2 902 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 GPR62Q9BZJ7 368 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
CLN6-216ENST00000636876 STK39Q9UEW8 545 aa17.23■□□□□ 0.35
CLN6-216ENST00000636876 PUF60Q9UHX1 559 aaKnown RBP17.23■□□□□ 0.35
CLN6-216ENST00000636876 I3L4J1 428 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms