RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	DDX3X	O00571	662 aa	Known RBP eCLIP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CAPN9	O14815	690 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	EPHB6	O15197	1021 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ASNS	P08243	561 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	RARG	P13631	454 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	TARS	P26639	723 aa	Known RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	STX2	P32856	288 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CIITA	P33076	1130 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	HNRNPD	Q14103	355 aa	Known RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	GRM2	Q14416	872 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CIAPIN1	Q6FI81	312 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	DUS1L	Q6P1R4	473 aa	Known RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ZDHHC24	Q6UX98	284 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	RGS9BP	Q6ZS82	235 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ZNF398	Q8TD17	642 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	JDP2	Q8WYK2	163 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	STMN2	Q93045	179 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ABTB1	Q969K4	478 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ITPKC	Q96DU7	683 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	DHRS1	Q96LJ7	313 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	SIKE1	Q9BRV8	207 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	TAOK3	Q9H2K8	898 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ZNF277	Q9NRM2	450 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	KRT82	Q9NSB4	513 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	RGS17	Q9UGC6	210 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	FEM1B	Q9UK73	627 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CROT	Q9UKG9	612 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	PRR12	Q9ULL5	1215 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	PACSIN2	Q9UNF0	486 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	MRPL11	Q9Y3B7	192 aa	Known RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ACTL7B	Q9Y614	415 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CNTNAP1	P78357	1384 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306		A0A0A6YYK5	440 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CLRN2	A0PK11	232 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	MYMK	A6NI61	221 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L15	C9J2P7	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L13	C9JLJ4	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L11	C9JVI0	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L18	D6R9N7	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L22	D6RA61	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L17	D6RBQ6	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L19	D6RCP7	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L20	D6RJB6	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	MEIS2	O14770	477 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	RIPK2	O43353	540 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CCDC22	O60826	627 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	LGR5	O75473	907 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CYP3A4	P08684	503 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	TAC1	P20366	129 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CRABP2	P29373	138 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ZNF76	P36508	570 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	DR1	Q01658	176 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L24	Q0WX57	530 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	HSP90AA5P	Q58FG0	334 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	SLC45A4	Q5BKX6	768 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	KIAA1755	Q5JYT7	1200 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	OLFML2B	Q68BL8	750 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	GRAMD4	Q6IC98	578 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CENPP	Q6IPU0	288 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	USP17L6P	Q6QN14	398 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	PHLDB2	Q86SQ0	1253 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	SIAH1	Q8IUQ4	282 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	NUP93	Q8N1F7	819 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	HAS1	Q92839	578 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ARHGEF2	Q92974	986 aa	Known RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	POLR3C	Q9BUI4	534 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	PITPNM3	Q9BZ71	974 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	NACA2	Q9H009	215 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CCDC113	Q9H0I3	377 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	NRDE2	Q9H7Z3	1164 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	INIP	Q9NRY2	104 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	ZDHHC7	Q9NXF8	308 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	NKIRAS1	Q9NYS0	192 aa		11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.41	□□□□□ -0.58
CHD2-223	ENST00000636306	RPTOR	Q8N122	1335 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	EP400	Q96L91	3159 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306		F8W8V4	182 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	KIAA0391	O15091	583 aa	Known RBP	11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	TCEA3	O75764	348 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	KRT36	O76013	467 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	KRT18	P05783	430 aa	Known RBP	11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	ZCCHC18	P0CG32	403 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	ITGA4	P13612	1032 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	HSPA6	P17066	643 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	GEMIN4	P57678	1058 aa	Known RBP	11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	IL9R	Q01113	521 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	CDR2	Q01850	454 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	DSG1	Q02413	1049 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	MYBPC2	Q14324	1141 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	BCL2A1	Q16548	175 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	DALRD3	Q5D0E6	543 aa	Known RBP	11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	PPP4R3CP	Q6ZMV5	832 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	ZBED8	Q8IZ13	594 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	RIBC1	Q8N443	379 aa	Predicted RBP	11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	DEPTOR	Q8TB45	409 aa		11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	EPS8L3	Q8TE67	593 aa	Known RBP	11.4	□□□□□ -0.58
CHD2-223	ENST00000636306	CRYGN	Q8WXF5	182 aa		11.4	□□□□□ -0.58

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