RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 TFAMQ00059 246 aaKnown RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CYP24A1Q07973 514 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 PSMD6Q15008 389 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 EDRF1Q3B7T1 1238 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CENPPQ6IPU0 288 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 TMEM184AQ6ZMB5 413 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CEP57Q86XR8 500 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 ADSSL1Q8N142 457 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 VN1R2Q8NFZ6 395 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CXorf38Q8TB03 319 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 LNX1Q8TBB1 728 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CACTINQ8WUQ7 758 aaKnown RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 RIN2Q8WYP3 895 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 PIK3R5Q8WYR1 880 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 SUSD3Q96L08 255 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CLSTN2Q9H4D0 955 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 UBE2ZQ9H832 354 aaPredicted RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 INTS13Q9NVM9 706 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CLDND1Q9NY35 253 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 NUB1Q9Y5A7 615 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 PTPRJQ12913 1337 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 M0QZQ0 153 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 BIN1O00499 593 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 SPTLC1O15269 473 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 TEX28O15482 410 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 GLP2RO95838 553 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 CD44P16070 742 aaKnown RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 PAX3P23760 479 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 NR2F2P24468 414 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 RPL13P26373 211 aaKnown RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 TKTP29401 623 aaKnown RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 CA8P35219 290 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 CLDN10P78369 228 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 RBM10P98175 930 aaKnown RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 TFF2Q03403 129 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 DLX2Q07687 328 aaPredicted RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 DUOXA2Q1HG44 320 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 SCARA3Q6AZY7 606 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 PRSS55Q6UWB4 352 aaPredicted RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 WDR49Q8IV35 697 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 C1orf127Q8N9H9 656 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 TRIML1Q8N9V2 468 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 OR5B17Q8NGF7 314 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 GPT2Q8TD30 523 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 PLEKHO2Q8TD55 490 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 SLC22A17Q8WUG5 538 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 ZNF516Q92618 1163 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 CCDC127Q96BQ5 260 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 BORCS6Q96GS4 357 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 DHTKD1Q96HY7 919 aaPredicted RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 FAM84AQ96KN4 292 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 POP1Q99575 1024 aaKnown RBP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 CLSTN3Q9BQT9 956 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 EMILIN2Q9BXX0 1053 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.52□□□□□ -0.73
LINC00339-210ENST00000635675 CLEC1BQ9P126 229 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 FNIP2Q9P278 1114 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 THEGQ9P2T0 379 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 SCN1AP35498 2009 aa10.52□□□□□ -0.73
LINC00339-210ENST00000635675 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 SYN3O14994 580 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 MAPK13O15264 365 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 TBX10O75333 385 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 AKAP3O75969 853 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 C1RP00736 705 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 DLATP10515 647 aaKnown RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 KCNA5P22460 613 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 KLRC2P26717 231 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PPP1R2P41236 205 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 NDUFV1P49821 464 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PMS1P54277 932 aaKnown RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 MCCD1P59942 119 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 CREMQ03060 361 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 ADAM9Q13443 819 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 MRPL58Q14197 206 aaKnown RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PSMD5Q16401 504 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 LMBRD2Q68DH5 695 aaPredicted RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 ANKRD40Q6AI12 368 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PDXDC1Q6P996 788 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PPFIBP1Q86W92 1011 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 ATXN2LQ8WWM7 1075 aaKnown RBP10.51□□□□□ -0.73
LINC00339-210ENST00000635675 MSLNLQ96KJ4 702 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 FNBP1Q96RU3 617 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 MTMR12Q9C0I1 747 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 MTRRQ9UBK8 725 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 SIX4Q9UIU6 781 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 ITGA11Q9UKX5 1188 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 PCDHB8Q9UN66 801 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 FRMD4BQ9Y2L6 1034 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 BACE2Q9Y5Z0 518 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 HCFC2Q9Y5Z7 792 aa10.51□□□□□ -0.73
LINC00339-210ENST00000635675 H3BQ06 376 aaPredicted RBP10.5□□□□□ -0.73
LINC00339-210ENST00000635675 PSMA7O14818 248 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TBC1D4O60343 1298 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 TNNC2P02585 160 aa10.5□□□□□ -0.73
LINC00339-210ENST00000635675 ITGB3P05106 788 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms