RNA–Protein interactions for RNA: ENST00000635248.1

RABGAP1L-222, Transcript of RAB GTPase activating protein 1 like, human

TSL 5

Gene RABGAP1L, Length 3,074 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RABGAP1L-222	ENST00000635248	SGSM1	Q2NKQ1	1148 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RPAIN	Q86UA6	219 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ZNF710	Q8N1W2	664 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SNX27	Q96L92	541 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MMS19	Q96T76	1030 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ERVK-5	Q9HDB9	667 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ATP11B	Q9Y2G3	1177 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	INPP5F	Q9Y2H2	1132 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CIT	O14578	2027 aa		11.51	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	EIF3CL	B5ME19	914 aa	Known RBP	11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ITGA4	P13612	1032 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CDK17	Q00537	523 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	TLE2	Q04725	743 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	KYAT1	Q16773	422 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CCDC122	Q5T0U0	273 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SYT10	Q6XYQ8	523 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PALB2	Q86YC2	1186 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SHC3	Q92529	594 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PAWR	Q96IZ0	340 aa	Known RBP	11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	EIF3C	Q99613	913 aa	Known RBP	11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PACSIN1	Q9BY11	444 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PAXBP1	Q9Y5B6	917 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PCDHA13	Q9Y5I0	950 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MACROD2	A1Z1Q3	448 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	TNFAIP3	P21580	790 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CTCF	P49711	727 aa	Predicted RBP	11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	KRT83	P78385	493 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	TRIM60	Q495X7	471 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	HPDL	Q96IR7	371 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	XYLT2	Q9H1B5	865 aa		11.5	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SSU72P8	A0A1W2PR75	194 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	IGFBP6	P24592	240 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	KCNJ6	P48051	423 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MNX1	P50219	401 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	GNG11	P61952	73 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	GCNT1	Q02742	428 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ENPEP	Q07075	957 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ASTE1	Q2TB18	679 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ZNF667	Q5HYK9	610 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SLC39A5	Q6ZMH5	540 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	LRRC8D	Q7L1W4	858 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	DPH6	Q7L8W6	267 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	FAM71A	Q8IYT1	594 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RPUSD2	Q8IZ73	545 aa	Known RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MIOS	Q9NXC5	875 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MYO6	Q9UM54	1294 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	LAMA2	P24043	3122 aa	Known RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	DDX3X	O00571	662 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ZC3H11A	O75152	810 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	POMC	P01189	267 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RFX1	P22670	979 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	NAP1L1	P55209	391 aa	Known RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SOX4	Q06945	474 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SLC18A3	Q16572	532 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ALKBH5	Q6P6C2	394 aa	Known RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	DEFB128	Q7Z7B8	93 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	NOP9	Q86U38	636 aa	Known RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	JAKMIP2	Q96AA8	810 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PDCL3	Q9H2J4	239 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	DNAI1	Q9UI46	699 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	C2CD2	Q9Y426	696 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MME	P08473	750 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CCDC172	P0C7W6	258 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ABCB4	P21439	1286 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CYP2C18	P33260	490 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	MAPK8IP2	Q13387	824 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	TRAF7	Q6Q0C0	670 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	AGMO	Q6ZNB7	445 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RTN4RL1	Q86UN2	441 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	VPS36	Q86VN1	386 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	DBF4B	Q8NFT6	615 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	LNX1	Q8TBB1	728 aa	Predicted RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	NIF3L1	Q9GZT8	377 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SMYD3	Q9H7B4	428 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PLEKHA5	Q9HAU0	1116 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	TAS2R14	Q9NYV8	317 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SNX9	Q9Y5X1	595 aa		11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	BZW2	Q9Y6E2	419 aa	Known RBP	11.49	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	TET1	Q8NFU7	2136 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CCP110	O43303	1012 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CYP11B1	P15538	503 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SELP	P16109	830 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PRKCI	P41743	596 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	SCNN1G	P51170	649 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RBP5	P82980	135 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ALKAL1	Q6UXT8	129 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	BEST2	Q8NFU1	509 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RPS6KC1	Q96S38	1066 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	AGPAT1	Q99943	283 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CHST12	Q9NRB3	414 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CISH	Q9NSE2	258 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	NAGPA	Q9UK23	515 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	DCDC2C	A8MYV0	355 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	PTGES	O14684	152 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	BUB1	O43683	1085 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	NBN	O60934	754 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	RPLP2	P05387	115 aa	Known RBP	11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	ARHGAP25	P42331	645 aa		11.48	□□□□□ -0.57
RABGAP1L-222	ENST00000635248	KIF5A	Q12840	1032 aa		11.48	□□□□□ -0.57

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