RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 TSPAN6O43657 245 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 FKBP9O95302 570 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 IGLV2-14P01704 120 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 HNRNPLP14866 589 aaKnown RBP eCLIP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CXCR5P32302 372 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ADCYAP1R1P41586 468 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ID4P47928 161 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 RGS3P49796 1198 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 DNM2P50570 870 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 IL2P60568 153 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 LACTBP83111 547 aaPredicted RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 TMPRSS15P98073 1019 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 OCRLQ01968 901 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 SPIDRQ14159 915 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 GPR162Q16538 588 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 TMEM177Q53S58 311 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 DCAF17Q5H9S7 520 aaPredicted RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 SYDE2Q5VT97 1194 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 MFSD5Q6N075 450 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 FKBP9P1Q75LS8 142 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 OTOP1Q7RTM1 612 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 NXPE1Q8N323 547 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CISD2Q8N5K1 135 aaKnown RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CNTD1Q8N815 330 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CHST14Q8NCH0 376 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 OR5AN1Q8NGI8 311 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 DLG3Q92796 817 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ERCC4Q92889 916 aaPredicted RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 GFM2Q969S9 779 aaKnown RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 MTMR8Q96EF0 704 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CAMKK2Q96RR4 588 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ADAM2Q99965 735 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 C1QTNF7Q9BXJ2 289 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 SLC46A2Q9BY10 475 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CCDC8Q9H0W5 538 aaPredicted RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 NCDNQ9UBB6 729 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ZKSCAN5Q9Y2L8 839 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CHST2Q9Y4C5 530 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 ASB1Q9Y576 335 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 AKAP12Q02952 1782 aa3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 POLR3AO14802 1390 aaPredicted RBP3.24□□□□□ -1.89
SMARCB1-208ENST00000634926 CCDC194A0A1B0GVG4 234 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 UNC119BA6NIH7 251 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 GABRDO14764 452 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 AKAP10O43572 662 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 ULK1O75385 1050 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 IPO13O94829 963 aaKnown RBP3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 NDUFA10O95299 355 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 C1RP00736 705 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 MPLP40238 635 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 RAB27AP51159 221 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 ZNF81P51508 661 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 TBX4P57082 545 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 ALDH6A1Q02252 535 aaKnown RBP3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 PPP2R5AQ15172 486 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 VPS72Q15906 364 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 CRY1Q16526 586 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 ARHGAP44Q17R89 818 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 QSER1Q2KHR3 1735 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 ATP13A4Q4VNC1 1196 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 SSH2Q76I76 1423 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 MON2Q7Z3U7 1717 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 C11orf74Q86VG3 221 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 UNC5CLQ8IV45 518 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 PASD1Q8IV76 773 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 LCORLQ8N3X6 602 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 SH2D3CQ8N5H7 860 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 OR52N2Q8NGI0 321 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 ASB10Q8WXI3 467 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 TSR2Q969E8 191 aaKnown RBP3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 CHMP4CQ96CF2 233 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 CCDC136Q96JN2 1154 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 LSM14BQ9BX40 385 aaKnown RBP3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 SLC29A3Q9BZD2 475 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 HAPLN2Q9GZV7 340 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 C14orf93Q9H972 538 aaKnown RBP3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 EMC7Q9NPA0 242 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 AKIP1Q9NQ31 210 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 KCNH7Q9NS40 1196 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 TRHDEQ9UKU6 1024 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 B3GALT1Q9Y5Z6 326 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 CAMTA1Q9Y6Y1 1673 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 NFAT5O94916 1531 aa3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 DHX57Q6P158 1386 aaKnown RBP3.23□□□□□ -1.89
SMARCB1-208ENST00000634926 COL5A2P05997 1499 aaPredicted RBP3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 USP19O94966 1318 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 BCL9O00512 1426 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 SHTN1A0MZ66 631 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 PTPDC1A2A3K4 754 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 IKBKBO14920 756 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 PRC1O43663 620 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 PRKD3O94806 890 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 ATP2A2P16615 1042 aaKnown RBP3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 KPNA1P52294 538 aaPredicted RBP3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 ELLP55199 621 aaPredicted RBP3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 SESN2P58004 480 aaPredicted RBP3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 SESN3P58005 492 aa3.22□□□□□ -1.89
SMARCB1-208ENST00000634926 NHLH1Q02575 133 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms