RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 MB21D2Q8IYB1 491 aaPredicted RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 SLC35G2Q8TBE7 412 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 APEX2Q9UBZ4 518 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 AMACRQ9UHK6 382 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 KDM6AO15550 1401 aaPredicted RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 CCL15-CCL14A0A0B4J2E2 113 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ALX1Q15699 326 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 CCL15Q16663 113 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 RARS2Q5T160 578 aaKnown RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 C12orf60Q5U649 245 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 TMA16Q96EY4 203 aaKnown RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 RNPC3Q96LT9 517 aaKnown RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ADNPQ9H2P0 1102 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 RAD18Q9NS91 495 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 GGA3Q9NZ52 723 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 FLT1P17948 1338 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ARHGEF9O43307 516 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ORC4O43929 436 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 CYP2C19P33261 490 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 CAPZA2P47755 286 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 SGO1Q5FBB7 561 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 C6orf10Q5SRN2 563 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 PLA2G4FQ68DD2 849 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 NEDD1Q8NHV4 660 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 SEPT1Q8WYJ6 367 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 C20orf96Q9NUD7 363 aaPredicted RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 GUCA1CO95843 209 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ENO1P06733 434 aaKnown RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ALDH7A1P49419 539 aaKnown RBP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 LAMB3Q13751 1172 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 P3H1Q32P28 736 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 C10orf120Q5SQS8 335 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ATF7IP2Q5U623 682 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.33□□□□□ -0.44
SHPRH-211ENST00000629427 TSC22D3Q99576 134 aa12.33□□□□□ -0.44
SHPRH-211ENST00000629427 ABCA8O94911 1581 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 GRIN3BO60391 1043 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 IL18RAPO95256 599 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 SOAT1P35610 550 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 NCALDP61601 193 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 USP10Q14694 798 aaKnown RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 SNRNP35Q16560 246 aaKnown RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 ZNF555Q8NEP9 628 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 ATL2Q8NHH9 583 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 PRMT1Q99873 361 aaKnown RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 CACNA2D2Q9NY47 1150 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 MTMR4Q9NYA4 1195 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 E2F8A0AVK6 867 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 TEX33O43247 280 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 CELF2O95319 508 aaKnown RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 EPB42P16452 691 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 LRRC23Q53EV4 343 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 ZRANB3Q5FWF4 1079 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 NT5C1AQ9BXI3 368 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 ADAM33Q9BZ11 813 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 FAM49BQ9NUQ9 324 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 ABI2Q9NYB9 513 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 CRB1P82279 1406 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 NLRP11P59045 1033 aaKnown RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 RNF180Q86T96 592 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 GPRC5AQ8NFJ5 357 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 ARHGEF26Q96DR7 871 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 MYO1GB0I1T2 1018 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 GUCY1A2P33402 732 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 UBA3Q8TBC4 463 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 NUDT12Q9BQG2 462 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 CAPN10Q9HC96 672 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 PSD3Q9NYI0 1048 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 H2AFY2Q9P0M6 372 aaPredicted RBP12.32□□□□□ -0.44
SHPRH-211ENST00000629427 NCAM1P13591 858 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 PRKCEQ02156 737 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 TMEM117Q9H0C3 514 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 TASP1Q9H6P5 420 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 DTNAQ9Y4J8 743 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 TNS3Q68CZ2 1445 aa12.32□□□□□ -0.44
SHPRH-211ENST00000629427 KIAA0391O15091 583 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 CSE1LP55060 971 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 LRRC71Q8N4P6 559 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 HES6Q96HZ4 224 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 REEP2Q9BRK0 252 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ERAP1Q9NZ08 941 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 SOX11P35716 441 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 SKOR1P84550 965 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 EMC2Q15006 297 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 GOLGA7BQ2TAP0 167 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 TMCO5AQ8N6Q1 288 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 NSUN4Q96CB9 384 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 PAWRQ96IZ0 340 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 FAM129AQ9BZQ8 928 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 BRD8Q9H0E9 1235 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 H0Y626 953 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 PSMD14O00487 310 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 PCSK1P29120 753 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 UBE3AQ05086 875 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 STILQ15468 1287 aa12.31□□□□□ -0.44
SHPRH-211ENST00000629427 TDRD10Q5VZ19 366 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 ZMAT2Q96NC0 199 aaKnown RBP12.31□□□□□ -0.44
SHPRH-211ENST00000629427 APOL5Q9BWW9 433 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms