RNA–Protein interactions for RNA: ENST00000629036.2

DDX41-219, Transcript of DEAD-box helicase 41, humanhuman

TSL 4 BASIC

Gene DDX41, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-219ENST00000629036 PPP2R3CQ969Q6 453 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 SAAL1Q96ER3 474 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 CLSTN3Q9BQT9 956 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 TMEM206Q9H813 350 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 RPF1Q9H9Y2 349 aaKnown RBP12.07□□□□□ -0.48
DDX41-219ENST00000629036 AGPAT3Q9NRZ7 376 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 FNIP2Q9P278 1114 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 CD207Q9UJ71 328 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 EXOC7Q9UPT5 735 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 DERAQ9Y315 318 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 C2CD2Q9Y426 696 aa12.07□□□□□ -0.48
DDX41-219ENST00000629036 C2CD2LO14523 706 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 SPTLC1O15269 473 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 EXTL3O43909 919 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 NR1I2O75469 434 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 TADA2AO75478 443 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 B3GAT3O94766 335 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 RPN1P04843 607 aaKnown RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 RPL17P18621 184 aaKnown RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 RPL9P32969 192 aaKnown RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 MATR3P43243 847 aaKnown RBP eCLIP12.06□□□□□ -0.48
DDX41-219ENST00000629036 NDUFV1P49821 464 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 ZP2Q05996 745 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 FAM160A1Q05DH4 1040 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 MRPL58Q14197 206 aaKnown RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 POSTNQ15063 836 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 IER5LQ5T953 404 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 FAM171A1Q5VUB5 890 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 LLGL2Q6P1M3 1020 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 CBWD2Q8IUF1 395 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 CD302Q8IX05 232 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 KIF12Q96FN5 646 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 SUSD3Q96L08 255 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 TSPAN18Q96SJ8 248 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 FAM213AQ9BRX8 229 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 TTPALQ9BTX7 342 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 ASB7Q9H672 318 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 MRPL17Q9NRX2 175 aaKnown RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 FAM86C1Q9NVL1 165 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 HSPBP1Q9NZL4 362 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 CHMP5Q9NZZ3 219 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 MTRRQ9UBK8 725 aa12.06□□□□□ -0.48
DDX41-219ENST00000629036 UBQLN1Q9UMX0 589 aaKnown RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 USP15Q9Y4E8 981 aaPredicted RBP12.06□□□□□ -0.48
DDX41-219ENST00000629036 GOLGA8IPA6NC78 632 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 C19orf67A6NJJ6 358 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 GOLGA8JA6NMD2 632 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 M0QZQ0 153 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 PIRO00625 290 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 GFRA3O60609 400 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 C1RP00736 705 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 KCNB1Q14721 858 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 TMEM132DQ14C87 1099 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 ZCWPW2Q504Y3 356 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 C9orf57Q5W0N0 161 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 KANK3Q6NY19 840 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 CLEC17AQ6ZS10 378 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 NELFCDQ8IXH7 590 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 PLEKHO2Q8TD55 490 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 RIN2Q8WYP3 895 aaPredicted RBP12.05□□□□□ -0.48
DDX41-219ENST00000629036 BORCS6Q96GS4 357 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 PCIF1Q9H4Z3 704 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 DMAC2Q9NW81 257 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 MUTYHQ9UIF7 546 aa12.05□□□□□ -0.48
DDX41-219ENST00000629036 TGM5O43548 720 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 IL18RAPO95256 599 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 VNN2O95498 520 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 ANP32AP39687 249 aaKnown RBP12.04□□□□□ -0.48
DDX41-219ENST00000629036 PTPN5P54829 565 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 ELAVL2Q12926 359 aaKnown RBP12.04□□□□□ -0.48
DDX41-219ENST00000629036 PSMD2Q13200 908 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 PNOCQ13519 176 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 PSMD5Q16401 504 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 KNOP1Q1ED39 458 aaKnown RBP12.04□□□□□ -0.48
DDX41-219ENST00000629036 PUS10Q3MIT2 529 aaKnown RBP12.04□□□□□ -0.48
DDX41-219ENST00000629036 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 ARMCX5Q6P1M9 558 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 STXBP4Q6ZWJ1 553 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 SYCP3Q8IZU3 236 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 GPD1LQ8N335 351 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 C12orf76Q8N812 135 aaPredicted RBP12.04□□□□□ -0.48
DDX41-219ENST00000629036 C1orf127Q8N9H9 656 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 CASP10Q92851 521 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 TIGD1Q96MW7 591 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 PDE11AQ9HCR9 933 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.04□□□□□ -0.48
DDX41-219ENST00000629036 EXOC1Q9NV70 894 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 RBAKQ9NYW8 714 aaPredicted RBP12.04□□□□□ -0.48
DDX41-219ENST00000629036 SIX4Q9UIU6 781 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 FBXW11Q9UKB1 542 aa12.04□□□□□ -0.48
DDX41-219ENST00000629036 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 SYN3O14994 580 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 KIAA0391O15091 583 aaKnown RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 CLIC2O15247 247 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 ADH1AP07327 375 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 HOXB8P17481 243 aaPredicted RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 LILRA4P59901 499 aa12.03□□□□□ -0.48
DDX41-219ENST00000629036 SNRPFP62306 86 aaKnown RBP12.03□□□□□ -0.48
DDX41-219ENST00000629036 VARS2Q5ST30 1063 aaKnown RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms